Thrips palmi (melon thrips): 117643754
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Entry
117643754 CDS
T08251
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117643754
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpal04812
]
117643754
Cytoskeleton proteins [BR:
tpal04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117643754
Intermediate filaments
Intermediate filament-binding proteins
117643754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Ribonuc_L-PSP
DUF713
Motif
Other DBs
NCBI-GeneID:
117643754
NCBI-ProteinID:
XP_034238720
UniProt:
A0A6P8YNE9
LinkDB
All DBs
Position
Unknown
AA seq
2389 aa
AA seq
DB search
MTTDISLVRWDPTLQSEIVEDYEYDGGNSSSRLFERSRIKALADERESVQXKTFQKWVNS
HLVRVNSRISDLYIDMRDGKNLLKLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLREQ
RVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQMK
TAGYHNVNVRNFTTSWRDGLAFNAIIHKHRADLIQFDKLSKSNAMYNLNNAFNVAEDKLG
LTKLLDAEDVFVDQPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIALENDRTIQD
YEKLTSDLLMWIENTIASLGERKFANSLEGVQRQLAQFSNYRTVEKPTKFVXKGNLEVLL
FTLQSRMRANNQKPYTPREGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLAAR
FNRKAGMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDILAYEERVQAVVAVSQ
ELEAENYHDMARINARKDNVLRLWSYLLELLRARRLRLELSLQLQQSFQEMTYILDSMED
MKMTLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKAVVQQSQRFLDEGMTGEEGYK
PCDPTIVVDRVSQLENAYSELVKLAVERRSRLEESKRLWQFYWDMADEENWIKEKEQIVS
TGDIGHDLTTIHLLLSKHKALETEISSHEPQLVSVMSVGEELVRQEHFGKKRIEERLQEI
MGMWHHLLDTSALRRRRLEEAVDFHRFFADADDVDHWMLDVLRLVSSEDVGRDEANVQSL
LKKHKDVADELKNYATAIEALHQQAGTLGERDRESAEVQERLASIDHRYKELIELAKLRK
QRLLDALSLYKLLSESDGVEQWIGEKDRMLQTMVPAKDIEDVEIMKHRYDGFEXEMNANA
SRVAVVNQLARQLLHVEHPNSEQILARQNQLNHDWAELREKAEGKREELNSAHGVQTFHI
ECRETISWIEDKKRILQSTDSLEMDLTGVMTLQRRLSGMERDLAAIQAKLDALDREAEAI
SGEHPEEAAVIRQRIEQIQTIWEQLTQMLKERDSKLEDAGDLHRFLRDLDHFQAWLTKTQ
KDVASEDTPASLAEAEKLLSQHQSIREEIDNYTDDYTKMMEYGERLTAEPSTQDDHQYMF
LRERLKALRDGWEELHQMWENRQQLLSQSLNLQMYNRDAKQAEVLLSQQEHVLSKDETPT
NLEQAESLIKRHEAFLTTMEANDDKVNSVVQFASRLSDEGHFATDKVLKKAQNIEERREA
NRQRALEQMEKLKDQLQLHQFLQDCEELGQWVQEKNITAQDETYRSAKTVHSKWTRHQAF
EAEIASNKNRLDEVQRSGEELKREKPELAELIDPKTSELGQQFDDLERTTKEKGERLFDA
NRETLMHQTCDDIDSWMTDLEKQIESEDTGTDLASVNILMQKQQMIETQMAVKAKQVTEL
ESQAEFLQRTVPEKMDQITEKKKAVEQRFEQIKAPLLERQRQLEKKKEAFQFRRDVEDEK
LWIAEKMPQATSTDFGNSLFNVHMLKKKNQSLRNEIDNHEPRIHAVCSNGRKLISEDHED
APQFMHLIEDLLSKWDRLKSAVDERRNQLLQSEKAQQYFFDASEAESWMSEQELYMMVED
RGKDEISAQNLMKKHEGLEQAVEDYSNTIRQLGDTAKQLISEQHPDSDQIAVKQSQVDKL
YAGLKDLAGERRAKLDEALQLFMLNREVDDLEQWIQQRELVAGSHELGQDYDHVTLLWER
FKEFARDTEAVGSERFNQVNSIADSLIAASHSDSATIAQWKDGLLEAWQDLLEMIETRTQ
MLVASRELHKFFHDCKDVLGRIQEKEHAMSDELGRDAGSVSALQRKHQNFMQDLQTLQSQ
VSQIQKESENLQTSYAGDKAKEITNREAEVVNAWSNLQNMCDSRKQKLADTGDLFKFFID
VRTLMLWMDDVARQMNTSEKPRDVSGVELLMNNHQSLKAEIDTREENFTACISLGKELLS
RNHYASNEIKEKLLSLTNQRHSLLRRWEERWENLQLILEVYQFARDAAVAEGWLIAQEPY
LMASELGMSIDDVEALIKKHEAFEKSAAAQEERFSALERLTTFELKEFKRREEEKERKRQ
EELAAQQQPITSPQGTGDRPDGPGSPQAEAVQAASDQEAQVVTDVEDNLHKRRTMPEPAP
SLRQNPPERVKSLPVQSTQPTAPRLSAKDTSSTSRKKDRSRSKSPFRSFRWKKGSGPKSP
TLAPTSASDDESNMEREEAASSTNMEGTLTRKHEWENQTKKATNRSWDKVYMVLRGSLFS
SYKDQKSYNSAPGICFKNESPADLRGGSCLLAEDYTKKKHVFRLKLNGGAEYLFQAKDDS
ERSKWVTSLAQACELQGSPGPSRAQTLPASTEQRREDAKRRSFFTLKKS
NT seq
7170 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagacatatccctggtccggtgggacccgacgctccagtcggagatcgtcgag
gactacgagtacgacggcggaaactcatcgtcacgactcttcgaacgatcgcgcatcaag
gcgctagcagacgaacgagaaagtgtacagnaaaaaacgttccaaaaatgggtcaactcc
catctagtgcgagtcaactcgcgtatcagcgacctgtacatcgacatgcgggacggcaag
aacctccttaaactcctagaagtactctccggagagagattaccacggccaaccaaaggc
aaaatgcgtatccactgcctagaaaacgtagacaaagcactccaattcctgcgcgagcag
agagtgcatttggagaacatggggtcccacgacatcgtggacggcaacccccgcctgtcc
ctgggtcttatttggaccatcattcttcgcttccagatccaagacatcacgatcgaagag
accgacaaccaggagaccaagtccgccaaggacgccctgctgctgtggtgccagatgaag
accgccggctaccacaacgtcaacgtgcgcaacttcaccacctcgtggcgcgacggcctg
gccttcaacgccatcatccacaagcaccgcgccgacctcatccagttcgacaagctgtcc
aagtcgaacgccatgtacaacctcaacaacgccttcaacgtggccgaggacaagctgggg
ctcaccaagctgctggacgcggaggacgtcttcgtggaccagcccgacgagaagtccatc
atcacgtacgtggtgacgtactaccactacttcagcaagatgaagcaggagacggtgcag
ggcaagcgtatcggcaaggtggtgggcatcgcgctggagaacgaccgcaccatccaggac
tacgagaagctgaccagcgacctgctcatgtggatcgagaacacgatcgcgtccctgggc
gagcgcaagttcgccaactcgctggagggcgtgcagcggcagctggcgcagttcagcaac
taccgcaccgtggagaagcccaccaagttcgtgngaaagggcaacctggaggtgctgctg
ttcacgctgcagtcgcgcatgcgcgccaacaaccagaagccctacacgccgcgcgagggc
aagatgatctccgacatcaacaaggcctgggagcgcctggagaaggccgagcacgagcgc
gagctggcgctccgcgaggagctgatccggcaggagaagctggagcagctggcggcgcgg
ttcaaccgcaaggccggcatgagggagacgtggctcagcgagaaccagcgcctcgtgtcg
caggacaacttcggcttcgacctggccgccgtggaggccgccgccaagaagcacgaggcc
atcgagacggacatcctggcgtacgaggagcgcgtgcaggccgtggtggccgtcagccag
gagctggaggccgagaactaccacgacatggcgcgcatcaacgcgcgcaaggacaacgtg
ctgcgcctctggagctacctgctggagctgctgcgcgcgcgccgactgcgcctcgagctg
tcgctgcagctgcagcagagcttccaggagatgacgtacatcctggactccatggaggac
atgaagatgaccctgctgtccgacgactacggcaagcacctgatgggcgtcgaggacctg
ctgcagaagcactcgctggttgaggccgacatcaacgtgctgggcgagcgcgtcaaggcc
gtggtgcagcagtcgcagcgcttcctggacgagggcatgaccggcgaggagggctacaag
ccgtgcgaccccaccatcgtggtggaccgcgtctcgcagctggagaacgcctactccgag
ctggtgaagctggccgtggagcgccgctcccgcctggaagagagcaagcggctgtggcag
ttctactgggacatggccgacgaggagaactggatcaaggagaaggaacagatcgtgtcc
acgggcgacatcggccacgacctcaccaccatccacctgctgctgtccaagcacaaggcc
ctggagacggagatctcgagccacgagccgcagctcgtgtccgtcatgtccgtgggcgag
gagctggtgcgtcaggagcacttcggcaagaagcgcatcgaggagcggctgcaggagatc
atgggcatgtggcaccacctgctggacacgtccgcgctgcgccgccgccgcctcgaggag
gccgtcgacttccaccgcttcttcgcggacgccgacgacgtggaccactggatgctggac
gtgctgcgcctggtgtcgagcgaggacgtgggccgcgacgaggccaacgtgcagtcgctg
ctcaagaagcacaaggacgtggcggacgagctcaagaactacgccacggccatcgaggcc
ctgcaccagcaggccggcacgctgggcgagcgcgaccgcgagtccgccgaggtgcaggag
cgcctggccagcatcgaccaccgatacaaggagctcatcgagctggccaagctgcgcaag
cagcgcctgctcgacgcgctgtccctctacaagctgctgagcgagtcggacggcgtggag
caatggatcggcgagaaggaccgcatgctgcagaccatggtgcccgccaaggacatcgag
gacgtggagatcatgaagcaccgctacgacggcttcgagnaagagatgaacgccaacgcg
tcgcgcgtggccgtggtgaaccagctggcgcggcagctgctgcacgtggagcaccccaac
tcggagcagatcctggcgcgccagaaccagctgaaccacgactgggccgagctgcgcgag
aaggcggagggcaagcgcgaggagctcaactcggcgcacggcgtgcagactttccacatc
gagtgccgcgagaccatcagctggatcgaggacaagaagcgcatcctgcagtccaccgac
agcctggagatggacctgacgggcgtcatgacgctgcagcgccgcctgtccggcatggag
cgcgacctggccgccatccaggccaagctggacgccctggaccgcgaggccgaggccatc
agcggcgagcaccccgaggaggcggccgtcatccgccagcggatcgagcagatccagacc
atctgggagcagctcacgcagatgctcaaggagcgcgactcgaagctggaggacgccggc
gacttgcaccgcttcctgcgcgacctggaccacttccaggcctggctcaccaagacgcag
aaggacgtggcgtccgaggacacccccgcgtcgctcgccgaggctgagaagctgctgagc
cagcaccagagcatccgcgaggagatcgacaactacaccgacgactacaccaagatgatg
gagtacggcgagcgcctgaccgccgagccgtccacgcaggacgaccaccagtacatgttc
ctgcgcgagcgcctcaaggccctgcgcgacggctgggaggagctgcaccagatgtgggag
aacaggcagcaactgctgagccagtcgcttaacctgcagatgtacaaccgcgacgccaag
caggccgaggtgcttctgagccagcaggagcacgtgctgagcaaggacgagacccccacc
aacctggagcaggccgagagcctcatcaagcggcacgaggccttcctcaccaccatggag
gccaacgacgacaaggtcaactccgtggtgcagttcgccagcaggctgagcgacgagggc
cacttcgccaccgacaaggtgctcaagaaggcccagaacatcgaggagcgccgcgaggcc
aatcggcagcgcgccctggagcagatggagaagctcaaggaccagctgcagctgcaccag
ttcctgcaggactgcgaggagctgggccagtgggtgcaggagaagaacatcacggcgcag
gacgagacgtaccgcagcgccaagacggtgcacagcaagtggacgcgccaccaggccttc
gaggccgagatcgcgtccaacaagaatcgcctggacgaggtgcagcgctccggcgaggag
ctcaagagggagaagcccgagctggccgagctcatcgaccccaagacctcggagctgggc
cagcagttcgacgacctggagcgcaccaccaaggagaagggcgagcgcctgttcgacgcc
aaccgcgagacgctcatgcaccagacctgcgacgacatcgactcctggatgacggacctc
gagaagcagatcgagagcgaggacaccggcaccgacctggcctccgtcaacatcctcatg
cagaagcagcagatgatcgagacgcagatggccgtcaaggccaagcaggtgaccgagctg
gagtcgcaggccgagttcctgcagcgcaccgtcccggagaagatggaccagatcaccgag
aagaagaaggccgtggagcagcgcttcgagcagatcaaggcgcccctgctggagaggcag
cggcagctggagaagaagaaggaggcgttccagttccggcgcgacgtggaggacgagaag
ctgtggatcgccgagaagatgccccaggccacgtccaccgacttcggcaactcgctcttc
aacgtgcacatgctcaagaagaagaaccagtccctgcgcaacgagatcgacaaccacgag
ccgcgcatccacgccgtgtgcagcaacggcaggaagctcatctccgaggaccacgaggac
gcgccgcagttcatgcacctcatcgaggacctgctgtccaagtgggaccgcctcaagtct
gctgtcgatgagaggcgcaaccagttgctgcagtctgagaaggcgcagcagtacttcttc
gacgccagcgaagctgagtcgtggatgagtgagcaggagttgtacatgatggtggaagac
cgtggcaaagatgaaatttctgcgcaaaaccttatgaagaagcacgagggcctggaacag
gcagtggaggactattcaaataccattcggcagctgggagacaccgctaagcagcttatc
agtgaacagcatccagacagtgaccagattgctgtgaagcaatctcaagtggacaaactg
tatgctggactgaaggacctggcgggtgagcgaagagccaagttagatgaagctctacaa
ctcttcatgttgaacagagaagtagatgacctggagcaatggattcaacagagagaatta
gtggctggttcacatgagcttggtcaagattatgaccatgtcactctcctttgggagagg
ttcaaggaatttgctcgtgatactgaagctgttggctcagagcgattcaatcaagtgaat
agcattgctgattcactaattgcagcgagtcactctgacagtgccacaattgcccaatgg
aaagatggtcttctagaagcatggcaagatctccttgagatgattgaaactcgaacacag
atgctggttgcatctcgtgaacttcacaagttcttccatgactgcaaggatgtcttgggt
cgtatccaagaaaaggaacacgccatgtctgatgaattgggccgcgacgctggctcagtt
tctgcactccagcgaaagcatcaaaacttcatgcaagatttgcagaccttacagtcacag
gtttctcaaattcagaaggagtctgagaatttgcagacatcctatgcaggtgataaggcc
aaggaaatcacaaacagagaagcagaagttgttaacgcctggagtaatcttcagaatatg
tgtgacagtcgcaaacagaagttggctgatactggagatttgttcaaattctttattgat
gttagaacacttatgttgtggatggatgatgttgcacggcaaatgaacacttctgaaaaa
cccagggatgttagtggagtagagctactaatgaacaaccaccaaagtcttaaagctgaa
atagatacccgagaagaaaatttcactgcctgtatatctttaggcaaagagcttctctcg
agaaatcattatgcatcaaatgagattaaggaaaagcttctttcactgaccaatcaaaga
cactccttgttacgacgctgggaggagcgatgggaaaacctccagcttattttggaagtt
tatcagttcgctcgagatgcagcagtcgcagagggatggcttatagcacaagaaccttat
ctaatggctagtgaacttggaatgagtatagatgatgtagaagcactcatcaagaaacat
gaagcctttgaaaagtctgctgctgcccaagaggaaagattcagtgctctggagaggctt
acaacttttgaattaaaagagtttaagaggagagaagaagaaaaagaaaggaaacgacaa
gaagagttggcagctcagcagcaacctattacatcaccgcaaggaaccggagataggccc
gatggtcccggttcaccgcaagcagaagcagttcaggctgctagtgaccaggaggcacaa
gtggtgacggatgttgaagataatttgcacaagcgtcgcacgatgccagaacctgcaccg
tctctgcggcaaaatcctccggaaagggttaaatctcttcctgttcaatcaacacaacca
accgccccaaggttgagcgccaaagatacctcttccacctctcggaagaaagaccgctca
cgttctaagtcgccattcagaagtttccgttggaagaaaggctcgggtccaaagagcccc
actcttgctcctactagcgccagtgatgatgaatccaacatggagagagaagaagctgct
tcatcaaccaacatggagggtaccttaactcggaaacatgaatgggagaaccagacaaag
aaggcaaccaacaggtcatgggataaggtgtacatggtcctacgaggaagcctcttctct
tcatataaagaccaaaagtcgtacaactccgctcctggaatctgctttaagaatgagagt
ccagctgatcttaggggaggatcttgtctccttgcagaggactatactaagaagaaacat
gtattcaggctcaagttaaatggtggtgctgaatacttgttccaagctaaagatgacagt
gaaagatctaaatgggtaacaagtttggcacaggcttgcgaattgcaaggctctccagga
ccatctcgagcccagaccttacctgcatcaacagagcagcgcagagaggatgccaagaga
cgcagtttcttcacactcaagaaaagttaa
DBGET
integrated database retrieval system
