Thrips palmi (melon thrips): 117644106
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Entry
117644106 CDS
T08251
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117644106
Spliceosome [BR:
tpal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117644106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
DUF7462
Motif
Other DBs
NCBI-GeneID:
117644106
NCBI-ProteinID:
XP_034239210
UniProt:
A0A6P8YPM6
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MASGSEDELIGDGEEEVRPTRATRASARRGKKAATPARGTKTRRGRAAAASESMDDDVEQ
LNGSSNENGNSDAVPELDDVAMPPSVNNVQPSPLRAGIKLKSNSISEDTPEHQTMTTDIY
EEEAPAAATDIYGDMAEDESMDGSRPAPTEEMDTQEAQSHQEEAPAEIGNGAADESEAPV
KKPREGSKRKLPVDGEYDPSSPTSEDENEENPAKKAALSSESSPKKDKESKAKVLPELEK
YWKAVKDDSADFTGWTYLLQYVDQENDVEAAREAYDAFLSHYPYCYGYWRKFADYEKKNG
NKDRCEEVFERGVKAIPLSVDLWIHYLNYCVKEHADNEDFVRGEYEKAVDACGLEFRSDR
LWESYIKWENEGGRLLNVTALYDRLLATPTQAYTNHFDSFQAHVNNNPPNKILSLDEFFK
IRQEVLQQKKTFDQSPAATDDGAPPGEDVDAPPGEESEQVITAKNDEETTAVRERIISIR
RKVHSQTVDAVSARWNFEEGIKRPYFHVKPLERCQLKNWKEYLDFEIEQGEVKRAIVLFE
RCLIACALYEEFWMKFVKFLQSVKEGDYNEKIREVLNRACTIHHPKKPSLHLFWSEFEEM
QGNYDKATEVLCHIEKLVPGMLQIVYRRINLERRRGNLEKASELYEHYVTNSKNKTIVVN
TAIKFARFCWKVENDIDKAIGILKKALEAEPDSTRLSLQLVSMEMERTPMNEAAIIEILD
QAIARDGDPEQKIMFSQRKLEFLEDFGNDIMSVQNAHDEFQRIFKQVKERKKKNDPDGKG
LSATSYPPPSYAQNGAYAQAYAGAAAPYPATGAVAAAAATGTTATTGTTATTAAGYNQQY
SQAYNQSGDYQNYQNWGYSQTGYSGYNQGWAGYYNY
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggaagcgaagacgaacttatcggcgacggcgaagaggaagttcgcccaaca
agggcaaccagagcatctgcgagacgtggtaagaaagcggcaactccagctcgtggaact
aaaactcgtcgtgggcgtgctgctgcagcatcagagagtatggatgatgatgtcgaacag
ttaaatggatcttccaatgagaatggaaattctgatgctgtacctgaacttgacgatgtt
gcaatgccaccatccgtgaataacgtacagccatcaccccttcgtgctggtatcaagctg
aagagcaacagtatcagtgaagacacaccagaacatcagacaatgaccactgacatctat
gaagaagaggcccctgctgctgcaacggacatatatggtgatatggcagaagatgaaagc
atggacggctccagacctgcacccacagaagaaatggacacacaagaggcacagtcgcat
caagaggaagctcctgctgaaataggcaatggagctgctgatgagtcagaagccccagta
aagaaacctagggaagggtccaagaggaaactgcccgttgatggagagtatgaccccagc
tcacctacctctgaagatgaaaatgaagaaaatcctgcaaagaaagctgcattgtcatca
gaatcatcacccaagaaagacaaagagtccaaggctaaagttttgccggagctcgagaag
tattggaaggcagtgaaggatgattctgctgatttcactggctggacctatcttcttcaa
tatgttgaccaagagaatgatgtagaagctgccagggaagcttatgatgctttcctgtcc
cattatccctactgctacggctactggagaaagtttgctgactatgagaagaagaatggc
aacaaggacagatgtgaagaggttttcgagcgtggtgttaaggccatccctctgagtgtc
gacctgtggattcactacctcaactactgcgtgaaggagcatgctgataatgaagacttc
gtgaggggcgaatatgaaaaggcagttgacgcctgtggccttgaatttaggtctgacaga
ctgtgggaaagctacatcaagtgggagaatgaaggaggcagactcctaaatgtaaccgcg
ttgtatgacagactacttgccactcccacccaggcttacacaaatcattttgacagcttc
caggcacatgttaacaacaaccctccaaacaagattctctctttggacgagtttttcaaa
attcgccaggaggttctgcagcagaagaaaacttttgatcaatcacctgctgccacagac
gatggtgcacctcctggtgaagatgtggacgcacctcctggtgaagaatctgaacaagtt
attactgctaaaaatgacgaggagacgactgctgttagggagcgtatcatctctatcagg
agaaaggttcacagccaaacagttgatgctgtctcagctcgttggaacttcgaagaaggg
attaagcgaccttacttccatgtgaaaccattggaaagatgtcagttaaaaaattggaag
gagtacttggactttgaaatagaacaaggagaagtgaaaagagctattgtcctttttgag
cgctgtcttattgcctgtgcactgtatgaagaattttggatgaagtttgtcaagttcctt
cagagtgtcaaggagggcgattataatgaaaaaataagggaggttttgaatagggcttgc
acaattcatcatcccaagaagcctagccttcatctattttggtctgaatttgaagaaatg
cagggaaattatgacaaagccactgaagtactgtgccatattgagaagcttgtccctggt
atgcttcaaatagtttatagaagaatcaacctagagagacggcgcggtaacttggagaag
gctagtgaattatatgaacactatgtaacaaattccaagaacaaaactattgttgttaat
accgccatcaagtttgccagattctgctggaaggtggaaaatgatattgataaagccatt
ggcattttgaagaaggccctagaggctgaaccggattcaacacgtctcagccttcaactg
gtcagcatggaaatggaacgcaccccaatgaacgaggctgccatcattgagattctagac
caagctatagcgagggatggagatccagagcagaagatcatgttttcacaacgcaaatta
gagttcttggaagactttggaaatgacatcatgagtgttcaaaatgcccatgacgaattc
caacgcatctttaaacaagtcaaggagcggaagaagaaaaacgaccctgatggcaagggg
ttatcagctacaagctacccccctccaagctatgcccagaatggagcatatgcacaggcc
tacgctggagcagcggcaccatatccagccactggagctgtcgctgctgccgctgccaca
ggaacaacagcaaccaccggcactacagcaacaactgcagctggctacaatcagcaatac
agccaagcttacaatcaatctggcgattaccagaactatcagaattggggatactcacag
actggctacagtggttacaatcagggatgggcaggttattacaactactga
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