Thrips palmi (melon thrips): 117644117
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Entry
117644117 CDS
T08251
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpal04131
]
117644117
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpal04147
]
117644117
Membrane trafficking [BR:
tpal04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117644117
Exosome [BR:
tpal04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117644117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
117644117
NCBI-ProteinID:
XP_034239238
UniProt:
A0A6P8YHI4
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGNVHVWNHESQQLVKSFEVCDVPV
RASRFVPRKNWILTGSDDMQVRVFNYNTLERAHAFEAHSDYVRCIIVHPTQPYILTSGDD
MLIKLWNWEKQWACQQVFEGHTHYVMQTVFNPKDNNTFASASLDRTVKVWQLGSNTPNFT
LDGHEKGVNCVDYYYGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISSVCFHPA
LPILLTGSEDGTVRIWHSGTYRLESSLNYGLERVWTIACMRGSNNVALGYDEGSIMVKIG
REEPAVSMDVNGGKIIWARHSEIQQANLKAMGETDDIKDGERLPLVVKDMGSCEIYPQTV
AHNPNGRFVVVCGDGEYIIYTAMALRNKAFGSAQEFVWAQDSSEYAIREGSSTVKVFKNF
KERKSFKPEFGAEGIFGGFLLGVRSVSGLSFYEWESLELVRRIDIQPKHVYWSESGELAC
LATEDSYFILRYDASVVAKALETKEGMSEDGCEEAFTVLGEMPESVRTGLWVGDCFIYTN
SVNRVNYYVGGEIVTVSHLDRTMYLLGYVARDNRLYLGDKELNVVSYSLLVSVLEYQTAV
MRGDFETADRVLPTIPQQYRTRVAHFLEKQGFKHQALAVSTDPEHRFDLAVQLGDLETAL
SLAREAGVQQKWRQLSELALNMGQLELAQECLHHAQDYGGLLLLATSAGNATVMKQVAET
ADTLGRNNVSFLSYFMLGNLEKCLDILIATNRIPEAAFFARTYLPSKVSMVVGLWRELLK
SKNQKASLADPKDYPNLFPGHLESLKTEQFLRAERHTQLPASAYTLTPANHERNPIAEMK
AAEASGQFNYVPEEDSNVTEEMEDAEMPPARPFVPAAAPVHASPAPVPTPVAVQPPSTPM
SSMPPPLIPTSSQPSPAPAFSMPPPLVPTAASPLQESKAPAETKQKAPPKGTVSDESLDS
DLDLDLDDIDPSDLNFDDALSLDD
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactggatataaaacgtaaactgactgcacggtctgaccgtgtgaagagt
gtagatctccatccaacagagccatggatgttggcatctctctacaatggcaatgttcat
gtatggaatcatgaaagccaacagttagttaaatcatttgaggtgtgtgatgttcctgtg
cgagcttctcgctttgtaccacgtaaaaattggattcttactggttcagatgacatgcaa
gtgcgtgtttttaattacaatacattagagcgggctcacgcgtttgaagctcactctgac
tatgttcgttgcatcattgtgcacccaacacagccctacatcctcacaagtggtgatgac
atgcttatcaagttgtggaactgggaaaagcaatgggcctgccaacaagtttttgaagga
cacacccattatgtcatgcagacagttttcaatcctaaggataacaacacttttgctagt
gcatctttggaccgtaccgtaaaggtgtggcagcttgggtccaacactcccaatttcacc
ctggatggtcacgagaaaggtgtaaattgtgtggattattattatggtggtgataagcca
tatttaatatctggagctgatgataggcttgttaaaatttgggattatcagaacaaaact
tgtgttcagactttggaaggccatgcgcaaaacatttcatcagtttgtttccatcctgct
ctgcccatcctgttgactggttctgaggatggaacagtacgtatttggcattctggcact
tacaggcttgagtcttctctcaattatggtcttgagagagtatggaccattgcttgcatg
agaggatccaacaatgttgctcttgggtatgatgaaggaagcatcatggtgaaaatagga
agggaagaaccagcagtttccatggatgtgaatggtggcaagattatctgggcccgtcac
tctgaaatacaacaggcaaatctgaaggcaatgggtgaaacggacgatatcaaggatggt
gagcgtctccctcttgttgtcaaagacatgggaagctgtgaaatctaccctcagacagtt
gctcacaaccctaatggaaggtttgtggttgtttgtggagatggagaatacatcatttac
actgccatggctctgcgtaacaaagcttttggctcagcccaggagtttgtatgggctcaa
gattcatctgagtatgccattcgtgaaggatcctccactgtaaaagtgtttaaaaacttt
aaggagcgcaaatctttcaaaccggaatttggagctgaaggcatatttggtggtttcttg
cttggcgtccgttcagtttcaggcttgtcattctatgaatgggaaagccttgaattagtc
cgacgaattgatatccagccaaagcatgtgtattggtcagagagtggagaacttgcctgt
ttagcaactgaagatagctacttcatccttcgctatgatgcaagtgttgttgctaaagca
ttagaaacaaaggaagggatgagtgaagatggatgtgaagaagccttcactgttcttgga
gaaatgccagaaagtgtcaggacaggattgtgggtgggtgactgttttatctacaccaac
agcgtgaaccgtgtgaactactatgttggaggagaaattgttacagtctctcacctagat
cgcaccatgtatctcctgggatatgttgctcgagacaatagattgtatcttggtgataaa
gaacttaatgttgtatcatatagcctcctggtttcagtgctagaatatcaaacagcagtc
atgcgaggtgattttgaaactgcagatcgagtactacccacgatacctcaacagtatagg
acaagagttgctcactttttggaaaagcagggcttcaaacaccaagccttagcagtgtca
acagacccagaacatcggtttgacttagccgtgcagttgggtgacttagaaacagctttg
tctcttgcacgggaggcaggggttcaacaaaaatggcgacagctttcagaattagctctg
aatatgggccaattggagcttgctcaggaatgcttacaccacgcacaggattacggcggt
ctcctgcttctggccacgtctgcaggaaatgctacagttatgaagcaagtggctgagact
gctgataccctcggaagaaacaatgtttcattcctctcatatttcatgcttggaaacttg
gagaagtgtttagatattcttattgctactaatcgaattcctgaggcagccttttttgca
agaacgtatctcccaagcaaagtctccatggttgtcggtctgtggcgcgagcttctaaag
agcaaaaatcaaaaggcttcgttggctgaccccaaggattaccctaaccttttccctggt
cacttggagtccctcaaaacagaacaatttttgcgagcagaacgccatactcagctacct
gcttcagcttacaccttgactccggctaatcatgagaggaaccctattgctgaaatgaaa
gcagcagaagccagtggtcagtttaattatgtgccagaagaagattcaaatgtcacagag
gaaatggaagatgcagaaatgccacctgcaagaccatttgtcccagctgcagccccagtg
catgcatcacctgctccagttcctactcctgttgcggtgcaaccaccttccacaccaatg
tcctcgatgccgccaccattaatccccacttcttcgcagccaagcccagcccctgcgttt
tcaatgccgccacccttagttccaacagctgcctcaccgcttcaagagtcgaaagcccca
gcagaaaccaaacagaaagcaccacctaaagggactgtctcagatgagtcgctggactca
gatctcgacctagatcttgatgacattgatccatcagacttgaactttgatgatgcattg
tccttggatgactga
DBGET
integrated database retrieval system
