Thrips palmi (melon thrips): 117644554
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Entry
117644554 CDS
T08251
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117644554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpal03009
]
117644554
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
Pre-60S particles
GTPases
117644554
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EF-G_D2
EFG_III
MMR_HSR1
EFG_IV
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
117644554
NCBI-ProteinID:
XP_034240001
UniProt:
A0A6P8YSH3
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MRLLDTKKLNELQNKTDVIRNICILAHVDHGKTTLADSLVASNGIISARMAGKLRYMDSR
KDEQERGITMKSSAITLYYNTAETEHLVNLIDSPGHVDFSSEVSTAIRLCDGAIVIVDVV
EGVCAQTKLALKQAWIENIQPVLVLNKMDRLITEVQLSPLDAYIHLTQILEQVNAVLGEL
FTMDVLSKTSAESDEQDKKDDKISSEASMKEVSEWASGLDDADDENLYFSPEKGNVVFAS
AVDGWGFRVKDFAKVLSEKLGISEAVLNKTLWGDFYLNTKTKRIMKGAQEKAKKPLFVQM
VLENLWSVYDNIAIRKDKEKLQKIVESLKIKLTTRDMRHTDAKVQLQAVCSQWLPLAIAV
LDMCCEKLPPPSKINEEKVEKLMCSSAKRFDSLPPETQKLKNSFMACSSRDEDPVIVFIS
KMFPVERSQLPENRSQPLTQEELALRREQARQRHAERINQESAGGNTPVASIPLPEPSGV
DKSSSTENNVADSSKSPLEDDAFVAFARVFSGKLRVGQDLYVLGPKHNPLTALNKERKGE
EIVDPSLTLKDLKNGQHITRIKVSSLYLLMGRELQALEEVPAGNVLGIGGLEEHVLKSCT
LSSTVACPSFTELQLMATPILRVALMPKHAADMPSLVRGLRLLNQADSCVQVLVQETGEH
VIVTAGEVHLQRCLDDLIERYAKIPIKASAPIVPFRETIVPPPTVDMVNEAIQDVASMKK
KDKEGLITVWTPNQNCSLTIRAVPLPPDVISILENNSDLIKTHSQYIASQQKGADITSSM
KAMTLSSSETQDNTANVPESSGSASISELDEDDVTALTDRTVKAIEKLKEDLKKAFDESG
DPIWQNAVDKIWSCGPRRFGPNILLNNVVDLPCSFWRSDDSVERSDDIKTLLLVENSFVN
GFQLATLSGPLCDEPMMGVAFVVSNWSLNSESVENELSGSTAWGPLSGQIMSCVKEGCRK
AFQAQPQRLMAAMYSCNIQVTAEALGRMYGVLNRRHGRVLAGDMAEGSGATFNVTAVLPV
VESFDFAAEIRKQTSGLASPQLVFSHWEVIDLDPFWVPSTEEEYLHFGEKADSGNRARQY
MDTVRRRKGLSVTTKIVEHAEKQRTLSKNK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgagactccttgacaccaagaaacttaatgaacttcaaaataagaccgatgttattagg
aatatctgtattttagctcatgttgatcatggcaagacaacgctggccgattctcttgtt
gccagtaatggtattatatcagcaagaatggctggaaaattaaggtacatggatagtaga
aaagatgaacaagagcgaggtatcactatgaaaagtagtgctattactctttattataac
acagctgaaacagaacatcttgttaacttaattgattcccctgggcacgtcgacttttct
tcagaggtatctactgctattcgtctgtgtgatggtgctattgttattgttgatgttgtt
gaaggagtttgtgctcagaccaagttggctttaaaacaagcatggatagaaaacattcag
ccggttttagttctcaacaaaatggatcgtttaatcactgaggtccaactgtctcccttg
gatgcatacattcatttaactcaaattttagaacaggtaaatgctgtcctaggagaatta
tttaccatggatgtacttagtaagacaagtgcagagtctgatgaacaagataaaaaagat
gacaagatttcatctgaagcaagtatgaaggaagtttcagaatgggcatcaggcttggac
gatgcagatgatgaaaatctctacttctccccagaaaagggaaatgttgtttttgcgagt
gctgttgatggctggggattcagagtcaaggattttgctaaagtgctgtcagaaaaattg
ggaatcagtgaggcagttctcaacaagactttgtggggagacttttatctcaacacaaag
actaaacgtatcatgaaaggagctcaagaaaaggcaaagaaacctctctttgtacagatg
gttttggagaatttatggtccgtttatgacaacattgctatcagaaaggataaagaaaaa
ctgcaaaaaatagtggagagcctaaaaattaaacttaccactcgtgatatgagacataca
gatgctaaagtacagttgcaggcagtgtgtagtcagtggttacctctagctattgcagtt
cttgatatgtgctgtgagaaattgcctccccccagtaaaataaatgaagagaaggttgaa
aagcttatgtgttcatctgctaagcgatttgactcccttcctccagaaactcaaaaattg
aagaattcctttatggcctgttcaagcagagatgaagatccagtcattgtgttcatttca
aaaatgttccctgtggagaggagtcaactaccagaaaacagatcccagccattgactcaa
gaagaactggctttgcgtcgagaacaagccaggcagaggcatgcagaaaggattaatcag
gaatcagccggtgggaatacacctgtagctagcattcctttgcctgaaccttccggtgtt
gataaaagttctagtaccgaaaataatgtggcagatagttcgaagtctcccctcgaggat
gacgctttcgtcgcctttgctcgagttttcagtggaaaacttcgtgtgggccaggattta
tatgttttaggcccgaaacataatcccttgactgctctcaacaaagaacgcaagggagaa
gaaattgttgatccttctttgacacttaaagatctcaagaatggccaacacataacacga
attaaagtatcaagtttgtatcttctgatgggaagagaactgcaagcacttgaggaagtg
cctgcgggaaatgttcttggtattgggggcctagaggaacatgtgcttaaatcatgtacc
ctatcatcaactgtggcttgcccctcatttactgaattgcaactgatggcaacaccaatt
cttagagttgctctcatgccaaaacatgctgctgatatgccatctcttgttcgtggtctt
cgtttattgaaccaagcagactcttgtgttcaagttcttgtacaggaaactggagaacac
gtaatagtaacagctggtgaagttcaccttcaacgttgtttagatgatttgattgaaagg
tatgctaaaataccgataaaagcatcagcgccaattgtaccgttccgggaaacaattgta
ccacctccaacagttgacatggttaatgaagctattcaagatgtagcatctatgaaaaag
aaggataaggaaggtcttataacggtgtggactccgaatcagaactgcagtctcaccatc
agggctgttccattgcctccagatgtcattagcatccttgagaataattctgatctgata
aaaacacatagccaatatattgcctctcagcaaaagggagctgatattacatcttcaatg
aaagccatgactctatccagttctgagacacaagacaacacggcaaatgtcccagaatca
tctggctctgcttccatttcagaactggatgaagatgatgtcacagctctcacagaccgc
actgtcaaagctattgaaaaactgaaagaagatttgaaaaaagcatttgatgagagtggc
gatcctatttggcaaaatgctgtcgacaaaatttggagttgtgggccccgccgatttggt
cccaacattttattgaacaatgtggtagatctaccttgctcattttggaggtctgatgat
tccgttgaacgaagtgatgacattaaaacattactgctggtggagaacagctttgtgaat
ggctttcaacttgccaccctatctggacctctttgtgatgagccaatgatgggggttgca
tttgtagtatctaattggtctttaaactcagaatctgtggaaaatgaactctctggatca
actgcatggggtcctctatcaggacagataatgtcatgtgtcaaggagggctgcagaaag
gcattccaggctcaaccacaacgtctgatggctgcaatgtatagctgcaacatccaggtc
actgcagaggctttagggaggatgtacggcgtgctgaaccggcgccacggccgcgtcttg
gccggcgacatggcggagggctcgggcgccaccttcaacgtgaccgccgtgctgcccgtc
gtcgagagcttcgacttcgcggccgagatccgcaagcagacctcgggcctggccagcccg
cagctcgtgttcagccactgggaggtgatcgacctggatccgttttgggtgccgtccacg
gaggaagagtacctgcacttcggggagaaggcggactcgggcaaccgagcccgtcagtac
atggacaccgtccgaaggaggaaggggctgtcggtcaccaccaagattgtggaacacgca
gagaagcagcgaactttgtccaagaacaagtag
DBGET
integrated database retrieval system
