Thrips palmi (melon thrips): 117644559
Help
Entry
117644559 CDS
T08251
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117644559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
117644559
NCBI-ProteinID:
XP_034240006
UniProt:
A0A6P8Z0B8
LinkDB
All DBs
Position
Unknown
AA seq
1796 aa
AA seq
DB search
MLQPRERSLQAMWLSTLLVLLCSAGAAYGQYFNNGTSRLTPPRKAYQPHKLHPCDQSSCY
PATGNLLIGRENKLHASSTCGLQNRERFCIVSHLQDNKKCFLCDSRPINDNIPQKSHTVK
NLIYKDSPSPGSRTRSWWQAESGKENVSITLDLEAEFHFTHVIMTFRTFRPAAMLIERSS
DFGITWQVYRYFAANCDQSFPGIPKHSPTSLSDVVCESRYSKVAPSTDGEVIFRVLPPSL
KIDDPYSQEVQSLLKMTNLRINFTKLHTLGDDLLDNRQEIQEKYYYAIYEMIVRGSCSCY
GHASRCLPLEGETPRPDMVYGRCDCTHHTRGLNCDLCEEFYNDLPWKPAIGKQSNACKKC
ECHNHATSCHFDNAVYEQTGRISGGVCDGCAHNTMGRNCERCIDYFYHDPQYDFSHPDAC
QPCDCDPRGSVDEAICEHRSNPEIGVEAGKCHCKANVDGRRCDRCRNGFWNFNETNPDGC
EACTCHTLGTVDNQGCDMETGECTCKRNVRGRDCNQCRPEHYGLSEDVDGCKACDCDPGG
AYDNNCDVLTGQCRCRPHVAGRQCNQPDQAFYTGLMDYNVKEAENAFGSDDAKVTTREPS
PDGLDDSFTGIGFMRVFENSELDFTIDDIRTSMDYDIVIRYEPQLPNGWEDVRVTVERDG
PIDQNGPCANTLPEDDSKLVSLSAGDRSAVVRPPACLEAGKTYHIKLSFKKYDKTSDTPT
ASILVDSIALVPRPENIPFFQDKPENIRARDEFERYRCADYFRTPMRGISVPEICKRFYN
SIGFYVQNGAHSCECDPTGALSTICNTLGGQCECKPNVAGRRCDRCQVGTYGFGPDGCRA
CDCNSIGSLDNVCENTGQCKCRPNMYGRDCGQCQPGFWNFPNCLRCQCNGYADTCDLFTG
ACIDCRNNTNGTYCDRCNVGYYGDPRLGRDIPCRPCPCPDTQESGHSFANECSLNPHTQD
VDCECQEGYAGSRCDVCADNYFGSPDQPGGNCSPCNCSNNVDVSHPGNCDPRTGKCLACL
FDTEGFNCEICKAGFYGDAVNKQCTSCVCNVLGTNQTHGHCDRNTGQCPCLPNVIGQSCD
ECRPNHWKIASGQGCEACDCDPTGSDETQCNPFDGQCKCKPGYGGRKCDQCESNSWGNPN
VECHPCQCNPQGAATMQCHQNNGSCICMPGIGGYNCDECARGYLGNVPYCRECGECFNNW
DRVLDELKVQTTDVLKSASEIRLKGATGAYSHQFDTMLQKIDEVQKVLHETKISANQLED
IQSLMNLLRKNLNQSVDALAEVEHLGSNTNQRILVANLTLDDLRVKLDLLSSTAKGLHDN
ATQLQESNVEGALNLTRQASHRSRQAQQDAERTKDLSAEAEKLCKRTENMVGKNSDRYQQ
IQEDNSRELENLSEKLAKLEDMVPDLNKQVCGKSDTQSEDNCDILCGGAGCGSCGGLSCE
NGASRKAEQALGYAQDADKQIRDKDAKAEELFQGVSAAHQETEQANRLVKEALEQAQRAK
NTSEVSLNESTSLAKQLEEFLNSDYATPNDISTRASETMRLDIGLEPVQITQLADNINKT
IASLTNIDSILSETREDLNAALVLKIKASDAKREATEVLGTAENVVQALDEARIAQEKAE
EAIQKANDDIAAADKDLVQIASETTEAQQKANETLNDVGKLQSRVRDLQTRFLKNSRDVG
ELKAEADSVVRDGTTAKEGAAKLRAKYDTASTRLEDRSKLSNSARQRAQRILNEASTLSI
TTNGKLKKLQDMAEVYGTNESQLSDLTSRLAELNDRMNEYLLFIKKQAEYYSTCSL
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagccccgagagcggtcacttcaagccatgtggctgtcgactctcctcgtcctt
ctctgctcggcaggagctgcttatggacagtattttaataatggaacctctagattaaca
ccaccaagaaaagcatatcaaccacataagttacatccatgtgatcaaagctcatgttac
cctgctacgggaaacttgctgattggtcgagagaacaaactccatgcatcatccacttgt
ggtctacaaaatagagaacggttttgtattgtatcgcatttgcaagataataaaaaatgc
ttcttgtgtgactccagaccgattaatgataatattcctcaaaaaagtcacacagtcaaa
aatctaatttacaaagatagtcctagtcctggctcaaggacaagatcatggtggcaggcg
gagagtggcaaagaaaatgtctccatcactttagatctggaagctgaattccacttcact
catgtcattatgacattcagaactttccgaccagctgctatgcttattgagagatcatct
gattttggaataacctggcaggtgtatcgttactttgctgccaactgtgaccagtcattc
cctgggatacccaagcatagtccaacttctctgtctgatgtggtttgtgaatctcgttat
tccaaagttgctccctccacagatggtgaggtaatcttcagagtcctacctccctcactc
aaaattgatgatccctattctcaagaagtacaaagtctcctcaaaatgaccaacttgaga
attaatttcacaaagcttcatacacttggtgatgatcttcttgataatagacaagaaatt
caggaaaaatactactatgctatctatgagatgattgtgcgagggtcctgctcttgctat
ggtcatgcttctcgctgcttgccactggaaggagagactcccagaccagatatggtctat
ggtcgatgtgactgcacacatcatactcgtggcttaaattgtgatctttgtgaagaattt
tacaatgatttaccatggaagcctgctattggcaaacagagtaatgcttgtaaaaaatgc
gaatgtcacaaccacgcaacatcttgccactttgataacgctgtttacgaacaaactggt
cgtattagtggtggagtgtgtgatgggtgtgcacacaatacaatgggccgaaattgcgaa
cggtgcatagactatttctatcatgacccgcaatacgacttcagtcaccctgatgcttgc
cagccttgtgactgcgaccccagaggctcagtggacgaagccatttgtgagcatcggtcc
aaccctgaaattggtgtggaagctggcaagtgtcactgcaaagcaaatgttgatggacgt
cggtgcgatcgatgcagaaatggattctggaacttcaatgaaactaatccggatggttgt
gaagcttgcacctgccacacattaggaactgtagacaatcaaggatgtgacatggagaca
ggagagtgtacttgcaagaggaatgttcgtggtagggactgcaaccagtgtcgtcctgaa
cactatggactatctgaagatgtcgatggttgcaaggcctgcgattgtgatcctggtggt
gcatacgataacaattgtgatgtacttactgggcagtgccgatgccgtcctcatgtggca
ggccggcagtgcaaccagcctgatcaggcgttctacactggtttgatggactacaatgtt
aaagaagcagaaaatgcttttggcagtgatgacgctaaggtaaccacccgtgagcctagc
ccagatggattggatgattcattcactggtattgggtttatgagagtatttgaaaattca
gaacttgatttcactattgacgatatcaggaccagtatggactatgacattgtaattcgt
tatgagccacagttgccgaatggttgggaagatgtcagagtgactgttgaacgtgatgga
ccaattgaccaaaatggaccttgtgccaatactctgccagaagatgattctaagctcgtc
tctttatcagcaggggatagaagtgcagttgtgaggcctccagcttgtttggaagcaggc
aagacataccatattaaattgtctttcaaaaagtatgacaaaacaagtgatacacctact
gcatccattcttgttgactctattgcattggtacctcgtccagagaacattccattcttc
caagataaaccggaaaatatcagagccagggacgaatttgagagatacaggtgtgccgat
tacttcaggacccctatgcgtggaatctcagtaccagaaatatgcaagagattctacaac
agtattggtttctatgttcaaaacggagctcattcttgtgagtgtgatccaacgggtgct
ctgagtactatttgtaacacacttggtgggcagtgtgaatgtaaaccaaatgttgctgga
agaagatgtgatcggtgccaagttggaacgtacggatttggaccagacggatgcagagcc
tgtgactgtaactcgattggatccttggacaacgtctgtgagaacacagggcagtgcaaa
tgtcgtccaaatatgtatggcagggattgtggccagtgtcagcctggtttttggaacttc
cccaactgtctgcgatgccagtgtaacggatatgcagatacttgtgacctatttactggt
gcttgtattgactgtcgtaacaacaccaatggcacatattgcgacagatgtaacgtggga
tattatggagatccccgcttaggaagagacattccatgccgtccatgcccttgtccagac
actcaagaatctggccattcttttgcaaatgaatgttccctgaatccccacacccaggat
gtggattgtgaatgtcaagagggatatgcaggttctaggtgtgatgtttgtgcggataac
tactttggaagcccagatcaacctggtggcaattgctctccttgcaactgcagcaataat
gttgatgtatcacatccaggaaattgtgatcctcgcactgggaaatgtcttgcttgtttg
tttgatacagaaggtttcaattgtgaaatctgcaaagctggattttatggagatgctgtg
aacaagcaatgcacttcctgtgtttgcaatgtgcttgggacaaaccagacccatggacac
tgcgaccgcaacaccggtcagtgtccttgtctgccaaatgtaattggtcagtcttgtgat
gagtgtaggcccaaccattggaagattgctagtgggcaaggttgcgaagcttgtgattgt
gaccccacaggttctgatgaaacacagtgtaatccttttgatggacagtgtaaatgtaaa
cctgggtatggtggccgaaagtgtgaccaatgtgaatccaattcctggggtaaccctaat
gtggagtgccatccctgtcaatgtaatcctcagggagctgctacaatgcaatgtcatcag
aacaacggaagctgtatctgcatgccaggcattggtggctacaactgcgacgagtgtgcc
cgtggctatttagggaacgtcccttactgccgagagtgtggagagtgtttcaataactgg
gaccgcgtgttggatgagttaaaggtacaaacaactgacgtccttaagtctgcttctgaa
atcagactaaagggtgccactggggcatactctcatcagttcgacacaatgctccaaaag
attgatgaggtgcagaaagtactgcatgagacaaagatctctgccaatcagcttgaagac
attcaatctttaatgaatctcctccgcaaaaaccttaatcaatcagtcgatgcattggct
gaagttgagcaccttggaagtaacaccaatcagcgaatccttgtggctaatctgactcta
gatgatcttcgggttaaacttgacttgctaagtagcacagctaagggcctccatgataat
gcaactcagctgcaagagtctaatgttgaaggtgctttgaatttgacccggcaagcgtct
catagatctcgccaagcacagcaagatgcagaacgtactaaagatctttcagctgaagca
gaaaaactgtgtaagcgtacggaaaatatggtagggaaaaattctgatcggtatcagcag
attcaggaggacaatagtagagaacttgaaaatttgtctgaaaagttagccaaacttgag
gacatggtccctgacctcaacaaacaggtttgtggcaaaagtgacactcaatcagaggat
aactgcgacatactctgtggcggagcaggatgtggctcttgtggtggtctttcctgtgaa
aacggtgcttctcgcaaagctgaacaagctttgggttatgctcaagatgctgacaaacaa
attagagacaaagacgcgaaggctgaggagcttttccaaggggtgtcagctgctcatcaa
gagaccgaacaggcaaatcgtttagtgaaagaggctctggaacaggcgcaaagagctaag
aatacttctgaagtcagcctgaatgagagtacatctctagcaaagcaacttgaagaattc
ctcaacagcgattatgctacaccaaatgacatcagcacaagagcgtctgaaacaatgagg
ctagatattggacttgaaccagtgcagatcactcagcttgctgacaacataaacaagacc
attgcctcacttacgaatattgatagcattttaagtgagacccgggaagacttgaacgct
gccttagttctaaagatcaaagcttctgatgccaagagggaggcaacagaggttttaggc
acagccgaaaatgttgtgcaagcactggatgaagcccgcattgcccaagaaaaagctgag
gaggcaattcagaaggcaaatgatgatattgcagctgctgacaaggatcttgttcagatt
gccagtgaaactactgaagcccagcagaaggccaacgaaactctgaatgatgttggcaag
ctgcaatcaagagtccgtgacctccagactcgtttcctgaagaactctcgtgacgtggga
gagttgaaggcagaggcagacagtgtggttcgggacggcaccacagccaaggagggtgct
gcgaagctccgtgctaagtacgacacagcctcaactaggctggaagaccgctccaaattg
tcaaacagtgcaagacaaagagcccagagaatcctgaatgaggcatccaccctctccatt
accaccaatgggaagctgaagaaactccaagatatggctgaagtctatggaactaatgag
agccaactatcagatttgacaagtagattagcagagttaaatgatagaatgaatgaatac
ctattattcattaaaaaacaggcagaatactacagtacttgttcattatag
DBGET
integrated database retrieval system