Thrips palmi (melon thrips): 117644571
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Entry
117644571 CDS
T08251
Name
(RefSeq) cytoplasmic FMR1-interacting protein-like isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117644571
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117644571
Factors involved in mRNA localization
Other mRNA localization factors
117644571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
SLED
Motif
Other DBs
NCBI-GeneID:
117644571
NCBI-ProteinID:
XP_034240025
UniProt:
A0A6P8YSJ6
LinkDB
All DBs
Position
Unknown
AA seq
1287 aa
AA seq
DB search
MTTDKVTLSDALSNVDVLDELTLPDEQPCIEAQPCSIVYRVNFDTNFEDRNGFVTGIAKY
IEEATVHASLNELLEEGVEHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVEVLAPEV
NKLLNFMYFQSKAIERFTSEVKRLCHQEKRKDFISEAYMLTLGKFINMFAVLDELKNMKS
SVKNDYSTYRRAAQFLKVMADSQTLQESQNLSMFLATQNKIRDTVKENLERVPGFEDLLS
DVVSLCVHMMETRMYLAPHEKHMLVKVMGFGLFLMDGEPQALSKLDQRKKLNLAKIDRIF
KNLEVVPLFGDMQIAPFNYIKRSKNYEPGKWPLSSSAAASPQSDLMVHLPQIRDDHQKYI
AELARYSNEVTTTYKESRSDAENKDTADLALRGLQLLSEWTSVVTELYSWKLLHPTDHHQ
NNQCPVEAEEYERATRYNYGDEEKYALIEVIAMIKGLQVLIARMETVFIDSIRRNIYAEL
QDFIQLFLREPLRKAVKNKKDLIRSILLSVRETCADWQRGVEPPGDPALKGKKDPDSGFG
IKVPRRNVGPSSTQLYMVRTMLESLIADKSGGKRTLRKDIDGQFLVQIDQFHKNSFFWSY
LLKFSESLQECCDLSQLWYREFYLEMTMGRRIQKCTVQHQHNDECTDLITMEKRIQFPIE
MSMPWILTDQILRNKEPSMMEYVLYPLDLYNDSAHYALTVFRKQFLYDEVEAEVNLCFDQ
FVYKLSEQIFTHYKQLASSIILDKRFRSECAATGVYLPYPRANRYETLLKQRHVLLLGRS
IDLNRLITQRINADMHKSLDLAISKFEAGDITGVVDLESLLQVNRFCHKLLSKFLALDDY
DAMFREANHNVLAPYGRITLHVFWELNYDFLPNYCYNAATNRFVKCRGITFTQPVHRDKP
PQMGHQYLWGSKQLNIAFTAIHEQYTGFVGPFHFRTLCRLLGYQGIAVVMEELLKIVRSL
IQGNLLQFTKILMDAMPKLCKLPRYDYGSPGVLGYYHAQLNDIVQYPDAKTELFHNFREL
GNTILLCLLLEQALSQEEVCDLLHAAPFQNILPRPFCKEGEKPENKQKRLEGKYAAIQIV
PNIERLGTAKQAMISREGDLLTRERLCCGLSIFEVVLTRLKSFLDDPIWAGPPPSNGVMN
IDECSEFHRLWSALQFVYCIPVGGNEFTVEELFGEGLNWAGCTMIVLLGQQRRFEALDFC
YHILRVQRVDGKDEVVKGIPLKKMVDRIRRFQVLNSQIFAILNKFLKSSEIDTTSIEHVR
CFPPPPPASMSHYHSRSEQYNQTGHHS
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgacaaggtgacgttgtcggacgctctctccaacgtcgatgttctggacgaa
ttgacgttgccagatgagcagccatgtatcgaagcacagccctgttccattgtgtacaga
gtcaatttcgacaccaactttgaagatcgcaatggcttcgtcactggtatcgccaagtac
attgaggaggctacggttcatgccagcttaaatgagctcctagaggaaggggttgaacat
gcagtgatgctgtacacatggcgttgctgctcccgtgcaatccctcagcctaaatccaat
gagcagccaaatcgtgtggagatttatgagaagacagttgaagtcctggcaccagaagtc
aacaagttactcaacttcatgtactttcagagtaaagcaattgaaagattcacttcagaa
gtcaaacgactttgccaccaagaaaagaggaaggactttatatctgaggcatatatgctg
accctggggaagttcatcaacatgtttgcagtccttgatgaacttaaaaatatgaaatcc
agtgttaaaaatgattattccacctacagacgagctgctcaatttttaaaggtcatggcc
gactctcaaacattgcaagaaagtcagaatttgtcgatgtttctagctactcaaaacaaa
attcgagatacagtcaaagagaacttggagcgagttccaggatttgaagatttattgtct
gatgtagtttctctctgtgttcacatgatggaaactcgaatgtatttggcccctcatgag
aagcacatgctagtgaaagtgatgggatttggcctttttctcatggatggtgaaccacaa
gctctctccaaacttgaccaacggaaaaagttgaatctagccaagattgaccgtatcttc
aaaaaccttgaagttgtgcccttattcggtgacatgcaaattgctccattcaactatatc
aaaagaagcaagaattatgaacctggcaagtggcctttatcctcttctgctgctgcaagc
ccacaatctgatttgatggttcatctacctcaaatacgagacgaccaccaaaagtacatt
gcagagctggcaagatacagcaatgaagttaccacaacgtacaaagagtctcgctcagat
gctgagaacaaggacactgctgatcttgccctgagaggtttgcagcttctctctgagtgg
acaagtgttgtgacagagttgtactcttggaaactgttgcatcctacggatcaccatcag
aacaatcagtgcccagtggaagcagaagaatatgaaagagccactcgttacaactatggg
gatgaagaaaaatatgctctgattgaagtgattgccatgataaaagggctccaagtttta
atagctcgaatggagactgtattcattgattcgattcgcaggaatatctatgctgagctt
caagattttattcagctgtttttgagagaacctttgaggaaagccgtgaaaaataagaaa
gacctgattcgcagtattcttttgtctgttcgtgagacctgtgcagactggcaaagagga
gtggaacctcctggagatccagcattgaagggaaagaaggacccagatagtggctttggt
atcaaagtcccccgtagaaatgtgggcccgtcatccacacagttgtacatggtccgcaca
atgctcgaatctctaattgctgataaatctggcgggaagagaacattgaggaaggatatt
gatggtcaatttttggttcaaattgatcaatttcacaaaaactcatttttctggagttac
cttctcaaattcagtgaatcactgcaggaatgctgtgatttatcacagttgtggtacagg
gagttttatttggagatgaccatgggcagacggattcagaaatgtactgtgcaacaccaa
cataatgatgagtgcaccgacttgatcacaatggaaaaaagaattcagtttccgattgag
atgtcaatgccatggattttaactgaccaaatcttgcgcaacaaggaaccttcaatgatg
gagtatgtgctctatcctttggacttgtacaatgatagtgctcattatgccctcactgtt
tttcggaaacagtttttgtacgacgaagttgaagctgaggtgaacctgtgttttgatcaa
tttgtgtacaagctcagtgaacagatcttcactcattacaagcagcttgccagcagtatt
attctggataagcggtttcgaagtgaatgtgcagccactggtgtttatcttccctatcct
cgagcaaatcgttatgaaacccttttgaaacaacgccatgtactgctgttgggccgctcc
attgatttgaatagactcataacacagcgcatcaatgccgacatgcacaaatctttggat
ttggctatcagcaaatttgaagctggtgatattactggtgttgtggatctggaaagcctt
cttcaagttaaccgtttctgtcacaaattgctgtccaaatttttggccctggatgattat
gatgccatgtttagagaagcaaatcacaatgtgcttgctccctatggaagaataacttta
catgttttctgggaactgaactatgatttccttccaaattactgctacaatgctgcaaca
aatagatttgtgaaatgtcgagggataacattcacacaacctgttcaccgggacaaacct
cctcagatgggacatcagtatctgtggggcagcaaacagctcaacatagccttcacagct
attcatgagcagtacacaggttttgtgggacctttccatttccggacactgtgccgccta
ttggggtatcaaggcattgcagttgttatggaagaactgctgaagattgttaggagtctt
attcaaggaaacctgcttcagtttaccaagatcctgatggatgcgatgcctaagctttgc
aagttaccaagatacgactatggatcaccaggtgttttgggctattatcatgcccaattg
aatgacattgtgcagtacccagatgctaagacagaattgtttcacaatttccgagagctt
ggaaatactatcttactatgtctgttgttggagcaagctttgtctcaagaagaagtctgt
gatttacttcatgcagctcccttccaaaacattctgcctcgtcctttctgcaaagagggc
gaaaaaccagaaaacaaacaaaagagattagaggggaagtatgcagcaatccagatagtg
ccaaatattgagcggttgggcactgcaaagcaagccatgatctctcgcgagggagatctt
ctgactcgagaaagactatgttgtggcttgtccatttttgaggttgttcttactcgactg
aagagcttcctggatgatcctatttgggcgggtcctcctccttcaaacggagtaatgaac
attgatgaatgttctgagttccaccgactgtggtctgctttgcaatttgtttactgcatt
ccagtgggaggcaacgaattcacagtggaggaactttttggggagggtctcaattgggcc
ggttgtaccatgatagtgttgcttggtcaacagaggcgttttgaggccttggatttctgt
tatcacattttaagggtgcaaagagtcgatgggaaggatgaagttgtgaagggcattcca
ttgaagaagatggtagatagaattcgaagattccaggtactcaactcccagatatttgcc
atcctgaataaattcctaaagtcaagtgaaattgacaccacttcaatagagcatgtcaga
tgcttcccaccacctccacctgcctccatgtctcattaccacagcagatcagagcagtac
aatcaaactggtcatcactcataa
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