Thrips palmi (melon thrips): 117645024
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Entry
117645024 CDS
T08251
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117645024
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117645024
Spliceosome [BR:
tpal03041
]
Complex C
Other components
Complex C specific factors
117645024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
DEAD
AAA_7
ABC_tran
FERM_M
DUF2922
Cas3-like_C_2
RsgA_GTPase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
117645024
NCBI-ProteinID:
XP_034240793
UniProt:
A0A6P8ZML1
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MAGMRPVFLKPKDDDLVQEDKSDLDADQNTSFIYNPNLSLSLDQHRQRLPVFKNRDHLLY
LLEQYQTVVLVGETGCGKSTQIPQYLYESGWCSDGKLVGVTEPRRVAATTLASRVADEKG
TPLGGLVGYSIRFDDTFDPVNTRIKYMTEGILLREMMADPLLRNYCVIVLDEVHERTLLT
DIIMGLLKKILQKRRTLKLIVASATVDAEQLRDFFNFNVSKDSKQKDSSVIISVQGRLYP
VDVFYVKEPVADYVKASVDTAMKIHDSEPKGDILIFLTGHEEVDRAVSLLKEHASQNRNS
ELKLLPLPMYGSLPYGDQLKVFRPTPRDLRKVVVATNIAETSITISGIVYVIDCGFMKLR
WFNPETQVDSLVLVPTSQASADQRAGRAGRVRSGKAYRLYQEEEFEKLAAATPPEMQRTE
LSGAVLQLKALGINNVLRFNFPSPPPAKNLLSALELLYALNAIDDSGQLTDPLGVQMAEF
PVSPLHSKTLITSGEFGCSEEVASIMAALQVQNIFTKPGGQAAIRARIAHRKFEVAEGDL
LTLLNVVVGFKKQEGSRAKPWCHENFLNYKALKRTDQIRNQIIKLLTKFKIPITSCNGRS
EIVCRCIAAGFFPNAAYLHHSGVYRTVRGGQELHIHPSSVLYTLEQPQWVLFSEIMSTNR
TYMRDLTVVQPDWLEELAPHFYQKRFDND
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctggcatgcgacccgtgtttctgaagccaaaagatgacgacttagtccaagaagat
aagtccgacttggatgcagatcaaaacacatcatttatctacaacccaaacctttctctg
tcattggaccaacaccgacaaagactacctgtcttcaagaaccgagatcacttactgtat
ctgttggagcaatatcaaactgtagttttggttggtgaaactggttgtggcaaaagtact
cagattccacagtacctgtatgaatctggttggtgttctgatggaaaacttgttggtgtt
actgaaccacgcagagttgcagctacaactctagcaagtagagttgcagatgaaaaggga
accccactgggtggtttggtgggatactcaattcggtttgacgatacctttgatcctgtg
aataccaggataaaatacatgaccgagggaattctacttcgcgaaatgatggctgaccct
ttgctgaggaactattgtgtgatagtgctggatgaggtgcatgaacgaaccctcttgact
gatattataatgggacttctgaaaaaaatcctgcaaaaacggcgcaccttgaagctgatt
gtagcctctgcaaccgtagatgctgagcagttacgagactttttcaacttcaatgtttca
aaggactcgaagcaaaaagattcttctgtgataattagtgttcaaggacggttgtatcct
gtggatgtattttatgtcaaagaacctgtagctgattatgtcaaggcctctgtagacaca
gccatgaaaattcatgactctgagcccaaaggagacattctaatattcctcactggacat
gaagaagtagatcgtgcagtgtctcttctaaaagagcacgcatcccagaacagaaacagt
gaattgaagttactgccgctgccaatgtatggttccctgccttatggtgaccagctcaaa
gttttccgaccaactcctagagatcttagaaaagttgtggtcgctacaaatatagctgag
acctcaattacaatttctggaatagtttatgtaatagattgtggatttatgaaactacgt
tggtttaatccagaaacgcaggttgactctctagtgctggttccaacatcacaagcctca
gccgaccaacgtgccgggcgagcaggacgtgtcagatcaggcaaagcttaccgtctgtac
caggaagaagaatttgaaaagctggctgcagccactcctccagaaatgcaaaggacagaa
ttatcaggagctgttttacaattgaaagcattaggcatcaacaatgtgctccgctttaat
tttccatctcctccacctgctaagaaccttctatccgcattagaacttttgtacgcttta
aatgcaattgatgatagcgggcagttaactgatccccttggtgtacagatggctgaattc
ccagtgtcacctcttcactccaaaactctgattacttctggtgagtttggatgctctgag
gaggtggcatcgataatggctgctttgcaggttcaaaacatctttacgaaaccaggagga
caagcagcaatcagagctcgtatagctcatcgtaaatttgaagttgctgaaggtgacttg
ttgactttgttaaacgtggttgtaggcttcaagaagcaggagggctcccgggcaaagcca
tggtgccatgaaaactttttgaattataaggctctaaaaaggactgatcaaataaggaac
caaataatcaaacttctcacaaagtttaagataccaataacttcctgtaatggtaggtct
gaaattgtgtgcaggtgtattgctgctggtttcttccctaatgctgcttatttgcaccac
tccggtgtctaccgcactgttcgaggtggacaagaactccatattcatcccagttcagtt
ttgtacactttggagcaaccccagtgggttctattcagtgaaattatgagcacaaaccgt
acatatatgagggacctgactgttgtacagccagattggttagaagaattagctccacat
ttttatcagaaaagatttgataatgactag
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