Thrips palmi (melon thrips): 117645188
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Entry
117645188 CDS
T08251
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117645188
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117645188
Spliceosome [BR:
tpal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117645188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117645188
NCBI-ProteinID:
XP_034241094
UniProt:
A0A6P8ZMS1
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MGRYDRRGSRDRDRDRRRSRSRSRDRRRRSRSRSRSRDRFRDRDFGRGGGGGRGGGGRGS
QPGGNLRKPRWDTSRLEPFKKDFYVPHPDTSSRPQHEVEEYRKSKEITLKGRNVPSPILS
FEESSFPDYVLREVRRAGFKDPTPIQAQGWPIALSGRDMVGIAMTGSGKTLSYTLPAIVH
INNQPRLQRGDGPIALILAPTRELAQQIQQVADDFGRSSQIRNTCIFGGAPKAPQARDLE
RGVEIVIATPGRLIDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQT
LMWSATWPKEVRNLAEEFLRDYTQLNVGSLQLSANHNILQIVDVCQEYEKESKLSTLLKE
IMAEKENKSIVFIETKRRVDEITRKMKRDGWPASCIHGDKTQQERDWVLQDFRSGKSPIL
VATDVAARGLDVEDVKFVINFDYPSSSEDYVHRIGRTGRSQRTGTAYTFFTSQNAKQASD
LVAVLKEANQVINPKLMEMAESSRGFGGGRSRNRWRGGRGRGGGGGRSRSRSPRSRSRSR
SRSPRRRDRSYSRDDRSGDPQTGGLLPTLVSLHMPLDPAALQTRDFLPGRLPGSLATFTN
SPSHLPTSYNSPSYVSTLYSLGNSGAAYSVLPDKIVYSDNQRVRW
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgggacgttacgatagacgagggtctcgcgacagggacagggatcgtcgcagaagccgg
agtagaagtcgggacaggaggaggcgcagcagatcacgcagccgaagcagggacaggttc
agggacagggactttggacgcggtggcggcggcgggcgtggcggtggtggccgtggcagc
cagcctggaggaaacctgagaaagcccagatgggacactagccgcctggagccgttcaag
aaggatttctatgttccacatcctgatacttctagcagacctcagcatgaagttgaagaa
tatcgtaagagtaaggagattactctgaaaggacgcaatgtcccaagtcccatcctgtcc
tttgaagaatcaagtttcccagattacgttctgagagaagtgaggagagctggctttaag
gatccaacccctatccaggcacagggctggcccattgctttgagtggaagggacatggtt
ggcattgccatgactggctcaggaaagacattatcatacacactgccagcaatagtccac
atcaacaaccaaccgaggctacagagaggtgacggccctattgcccttattcttgctcca
actcgtgagttggctcagcagatccagcaagttgctgatgactttggtagatcctcacaa
atcaggaatacatgcatttttggcggagcacctaaggcacctcaggctcgtgacttggaa
aggggtgttgaaattgtaattgcaactccgggtcgattgattgatttccttgaaagtgga
cgcaccaatctaaaacgctgcacataccttgtactcgatgaagctgatagaatgttggac
atgggctttgaaccccagatccggaagattattgatcaaattagacctgaccgtcagaca
ttgatgtggtctgcaacttggccaaaagaagtgcgaaaccttgctgaagagtttctcaga
gactacacccaactgaatgttggctctctccaactctcagccaaccataacattcttcaa
attgttgatgtatgccaagaatatgagaaagagagcaagttgagcacacttctcaaagaa
attatggctgaaaaggagaacaagagcatcgtgtttattgagacaaagcgacgggtagac
gagataactcgtaaaatgaaacgtgatggttggcctgcctcatgcatccatggagacaaa
actcaacaagaacgagactgggtgctacaagattttaggtcggggaagtctcctattctg
gtggccacagatgtagcagctcgtggacttgatgttgaagatgtcaagtttgtcatcaat
tttgactatccctcctcgtcggaagactacgtacatcgcatcggcagaaccggtcgctcc
caacgaactggcactgcctatactttcttcacatctcagaatgccaagcaggcttctgat
ttggtcgctgtcctcaaagaggccaatcaagtcattaacccaaaactgatggaaatggct
gaatcgtctcgtggatttggtggtgggagaagccgcaatcgctggcgcggtggtcgcggc
cgtggaggcggtggcggccggtctcgtagccgcagccctcgcagccgtagccgaagcaga
agccgcagcccccggaggcgagacaggagctactcccgggacgatagatcaggagacccc
cagactggaggtttgttgcccactctggtgtccctgcacatgccactagatccagcagct
ctgcaaactcgagattttctacctggccgcctgccgggcagtttagcaacattcactaac
tctccctctcaccttcccacttcatacaacagcccttcctatgtatcaacactgtacagt
ctaggtaactcaggtgctgcttactcagtattgcctgataagattgtatacagtgataat
cagagggttcgttggtag
DBGET
integrated database retrieval system
