Thrips palmi (melon thrips): 117645491
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Entry
117645491 CDS
T08251
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117645491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117645491
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117645491
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117645491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
117645491
NCBI-ProteinID:
XP_034241635
UniProt:
A0A6P8YVS4
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MAATRKLQGEIDRCHKKVAEGVETFEDIWHKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QLKVWIASPDIKDKGPLIEDRKWIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEISCWLVTSIDALNIQLDQFESEIESLLAGKKKRLDKDKQDRMDELKGKLEKHRFHIR
KLETLLRMLDNTAVEVGQIRKIKDDVEYYIEASQEPDFEENEFIYDDIIGLDEIELSGVG
LPSSATTDSNNSNDTGGTPTSTRSGGSPSTSPIQNLNHSSESPTLDAEKKKRDEQMAKVS
PVKPTAVRASQQNSLINTSGLPGIKPVMVTPSKTSTGVAHSTPNNSSPSSLLNHSVGNFA
AVAAANSHPAPPTTPTSNNSNNITSSKSTHSTENGTIPVSSPHSQPPSLSTTVGSSSNQQ
QLHHPAPQLSLVDTRPLGAVGSGSSTSNVSSTSTSNPPPHLQQASAGSTPPPAVSSNNQL
SSIVGSKQLRMQGLQGLQGLVNSMDHHQYNNSTVNCSSPPSPVSSAASPLPTLGASAASL
ATASSAGPIALVSPSPVTSVPTSGLSTSSVTALPTSTPVQTQQQSGQPQPVPQPQLPLQL
QSQPLSQQQQLPQQQPAQQPTLNGPNVGDVAGLSSLKSIAQQAIDRAGLEVPPPETNRSL
LESKMMMPVTTEAHIPPLLGVAPLGPVPLQKEHQRQFQMLDAAFYHLPLPSDSEKLRSYL
ARTPCPSPPYYPQVPLPDTDSLEFYQRLGNETLFFIFYYMEGTKAQYLAAKALKKQSWRF
HTKLMHWYQRHEEPRVINDEYEQGSYIFFDFDNWIQRRREGFTFEYKYLEDRDLN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgacgagaaagctccaaggtgaaatagaccggtgtcataagaaagtcgcagaa
ggcgtagaaacgtttgaagacatctggcacaaagttcacaatgccacaaacagtaaccaa
aaggagaaatatgaggctgatctcaagaaggagattaaaaagttgcagaggttacgggat
cagcttaaagtgtggattgcttctccggatatcaaggacaagggaccgctcattgaagac
cgaaagtggatagaaactcaaatggagaggtttaaagtagtggagcgggaaacaaaaacc
aaagcttactccaaagagggtctcggagctgcacaaaaactggatccagcgcagaaggaa
cgcgaggagatcagctgctggctagtcacatccatcgacgcgctcaatattcagttggac
caatttgagtcagaaatcgagtccctccttgcgggcaagaagaagaggttagataaagac
aagcaagatcgtatggatgagctgaaaggaaagttagagaaacatcgtttccatatccgg
aagctggagacacttctaaggatgttggataatactgcagtggaagtagggcagataaga
aaaattaaagatgatgtggagtattacattgaagcctcgcaagagccagactttgaagaa
aatgagtttatctatgatgacatcattggtcttgatgagatagaactttctggtgtaggt
cttccctcatctgcaacaacagacagtaataacagcaacgatacgggtggaacacctaca
tctacaagatcaggtggatcaccctctacttccccgatacaaaatctcaaccattccagt
gagagccctacccttgatgctgaaaagaagaagagagatgaacaaatggccaaagttagt
cctgtgaaaccaacggcagtgagagccagccagcaaaattcccttataaacacttctggc
cttcctggcatcaaacctgtaatggttacgccaagcaaaacaagtacaggggtggcacat
tcaactccaaacaatagctctccaagctcactattgaatcattctgtgggtaattttgct
gctgtagcagcagcaaatagccatcctgcacctcctaccactccaacttccaataattcg
aacaatatcaccagcagtaaatcaacacatagtacagaaaatggaaccataccagtttca
tcacctcacagccaacctccaagcttaagtaccacagttggatcatcgagtaatcaacag
cagctacaccatccagctccccaactctcattggttgacacaagaccgttaggtgctgtg
ggtagcggaagcagtaccagcaatgttagcagtacgagcacaagcaatcccccgcctcac
ttacaacaggcatctgcaggttcaactcctccccctgctgtttcctccaataatcaactg
tcatccattgttggcagcaaacagttaagaatgcaggggctccaagggctccagggattg
gtcaattctatggatcatcaccagtacaataattcaactgtaaattgctcatcgcctcca
tctcctgtgagcagtgcagcttcaccactaccaaccttaggtgcatcagctgcgtcatta
gccacagcttcatcagctgggccaatagccttggtgtcaccatcacctgtaacctcagta
cccacgtctggacttagcacgtcatcagtgacggcattgcccacatcaacgccagttcaa
acacagcagcagtcaggccaaccccagcctgttcctcagccccaactaccccttcagcta
cagtcgcaaccactaagccagcagcaacagctgccacaacagcagccagcgcagcaaccc
acattaaatggaccgaatgttggtgatgttgccggactgtcttcacttaaaagtattgca
cagcaagctattgatagagcaggtcttgaggttcctcctccagagacaaatagaagcttg
ttggagtccaagatgatgatgcctgtaactacagaagctcatattcctccattattggga
gtagcacctttaggccctgtccctcttcagaaagagcaccaacgtcagttccagatgctt
gacgctgcattttatcatttgccattaccatctgattcagagaagttacgatcttacctt
gcaagaactccatgtccgtcaccaccgtattatcctcaggttcctttgcctgatacagat
tccctagagttctatcagcggctggggaacgaaacacttttcttcatattctattatatg
gaggggaccaaggctcagtaccttgcagccaaggccctgaaaaagcaaagttggagattc
catacaaagttaatgcattggtatcagcgccatgaagagccaagagttatcaatgatgaa
tatgaacagggctcctacatattctttgactttgataattggatccagcgcaggagagaa
gggttcacatttgaatacaagtacttagaagacagggacctgaactga
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