Thrips palmi (melon thrips): 117645505
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Entry
117645505 CDS
T08251
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117645505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117645505
03009 Ribosome biogenesis [BR:
tpal03009
]
117645505
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117645505
Spliceosome [BR:
tpal03041
]
Complex A
U1 snRNP components
U1 related factors
117645505
Complex B
117645505
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
Pre-60S particles
Helicases
117645505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-GeneID:
117645505
NCBI-ProteinID:
XP_034241652
UniProt:
A0A6P8Z4W6
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MNRDRDRGSSRDGRRGGAGGGGRDFGRSGGGSRFGGGGGFGGGGFGGGGFGGGGGFGSSL
KGKQPGERLRKPRWDMSTLQPFRKDFYVPHPNVANRTPQEVAAYRSSVEITVKGTTAPNP
IMYFEEVNFPDYVTAEIRKQGFSQPTPIQAQGWPIAMSGRDMVGIAQTGSGKTLAYILPA
VVHINFQPRIVRNDGPIALVLAPTRELAQQIQQVATDFGSSTYVRNTCVFGGAPKGGQAR
DLERGVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD
RQVLMWSATWPKEVRNLAEEFLTDYIQINVGSLQLSANHNILQIVDVCQEYEKEGKLLKL
LQEIAAEAENKTMIFVETKRKVDEITRALSRYGWHAMAIHGDKSQQERDYVLNEFRNGKI
NILVATDVAARGLDVDDVKFVINYDYPSSSEDYVHRIGRTGRSRQTGTAYAFFTPQNGNK
ANDLISVLQEAKQVVNPKLYELSEMSRSGAFGRSRSRYGGGGGGGGRSGGGFRGGRDDRG
PRGMGGGRSGGLGGGGGLGGGLGGGLGGGLGGGSRGSSFGGSRDDRGSRGSRWGSDQGGA
GYSAKAGAGAGAAARPGFGAPPPLLAGATGAAASGAGYAAMPPGPPPAATNTMASNAMAY
AYANQMNGFAAYTQPPPPLPK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgagacagagataggggtagttcaagagatggacgccgaggaggggcaggaggt
ggtggacgagactttggcagatctggcggaggaagcagattcggtgggggtggtggattt
ggaggaggcggatttggcggaggtggatttggaggtggtggcggctttggaagcagcctg
aagggaaaacagcctggagaacgcctccgtaaacctcgatgggatatgagcactcttcag
ccattcaggaaggacttctatgttccacatcccaatgttgccaacaggacaccacaggaa
gtcgctgcatatcgatccagtgttgaaataactgtaaaggggaccactgctccaaatcca
attatgtattttgaagaagtcaattttcctgactatgtaactgctgagataaggaaacaa
ggattttctcaaccaacaccaattcaagcccaaggatggccgattgccatgagcggcaga
gacatggttggcattgcccaaactggttctggcaaaactttagcttacattttgccagct
gtagttcacatcaactttcaacccaggatagtgcgtaatgatggtccaatagctttagtt
cttgctcctacccgagaattggcccaacagattcagcaagtggcaacagattttggctcc
tctacttatgttcgcaacacatgtgtgtttggaggcgcgcccaagggaggtcaagctcgt
gatttggaaagaggagttgaaattgtgattgctactcctgggcggttaatcgacttcctg
gaacgaggcaccacaaatctacggcggtgtacctatcttgtgttggatgaagctgatcga
atgttagacatgggctttgagcctcaaattcgcaagattattgagcaaatcagacctgac
cgtcaagttctcatgtggtctgctacttggcccaaagaagttcgcaaccttgctgaagag
ttcttgacagattatatccagatcaatgttggctctcttcaactgtctgcaaaccataat
attcttcaaatagttgatgtttgtcaagaatatgaaaaggagggcaagctgcttaaactt
cttcaagaaattgctgctgaagcagaaaacaaaaccatgatttttgttgaaaccaagcgc
aaagttgatgaaattactcgtgcattgtctagatatggatggcatgctatggccattcat
ggagacaaatcacaacaagagagagattatgtactaaatgaattcagaaatggcaagatc
aatattttggtggcaactgatgtagcagctcgagggttagatgttgatgatgttaagttt
gtcatcaactatgactatccttcctcatcggaagactacgtccatcgcattgggcgtact
ggtcggtcacgtcagacaggaactgcctacgccttcttcacaccccaaaatggaaacaaa
gccaatgacctgatcagtgtactccaggaagcaaagcaggtggtcaatcccaagctgtat
gagctgagtgaaatgtccagatctggtgccttcggtcgaagccgcagcaggtacggcggc
ggtggtggcggcggcggccgctctggcggtggcttccgcggaggacgcgacgaccgtggt
cctcgcggcatgggaggcggtcgcagcggcggccttgggggcggcggtggccttggcggt
ggcctcggcggtggcctcggtggcggcctgggcggcggcagccgcggcagcagcttcggc
ggttcgagggacgaccgtggctccaggggctctcgttggggcagcgaccaaggaggcgct
ggatactccgccaaagctggcgcgggggctggcgctgcggctcgaccaggcttcggcgct
cctccacctctcctggccggtgccaccggtgctgcggcgagcggggctgggtacgcagcc
atgccccccggcccgcctcccgccgcaaccaacaccatggccagcaacgccatggcctac
gcctatgccaaccaaatgaacggcttcgcagcctacacgcagccgcctccacctctacct
aagtag
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