Thrips palmi (melon thrips): 117645522
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Entry
117645522 CDS
T08251
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpal03009
]
117645522
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117645522
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
90S particles
Helicases
117645522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
Cas3-like_C_2
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
117645522
NCBI-ProteinID:
XP_034241683
UniProt:
A0A6P8YNZ7
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MEDEKKSFTDLGLSAWIARQCDLIGVKNPTPIQKNCIPHIIKGGDCIGCAKTGSGKTLAF
ALPILNKLCEDPYGIFALVLTPTRELAYQIADQFNVIGKTLSLRTSVIVGGMDMMIQSQE
LSRKPHIVVATPGRLADHLESCDTFSLKRIKFLVLDEADRLLEGRFDHQLKTIFESIPEK
RQTLLFSATLSDSLDRVKAIADEKVFIWSASNEVATVDQLKQSYVLCPPLVRDGYLIETI
RTFRSQDENGSIMIFTDTCKNCQLLSMTLNEVGFENVALHAMAKQKERLAALAKFKSNVV
KILIATDVASRGLDIPAVQLVLNHILPNVPKEYIHRVGRTARAGREGLAVSLITPHDIKL
LHAIEEAINTKLTEYKVDDKEVSKIVTQVSVTKREAEIRLDETDYFERKAINKRKKLILE
GKDPDEEEALAEKRMKLKRKLARKQAKEAAKNRKVPLKSFDDDSD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaaagaagtcgtttacggatctaggccttagtgcttggatcgctcgtcaa
tgtgatttaattggggtgaagaatccaactcctatacagaaaaattgcatacctcacatt
ataaaaggaggggattgtattgggtgtgctaagacaggtagtggtaaaaccctagccttt
gcgctcccgattttgaacaagctttgtgaggatccttacggcatctttgcacttgtcctc
acaccaaccagagaattggcatatcagattgcagatcagttcaatgtaattggaaaaaca
ctaagtcttcgaacaagcgttattgtaggaggaatggacatgatgattcaatcacaagag
ctcagtcgtaaacctcacattgttgttgcaacaccaggcagactagcagatcatttggag
agttgtgacactttcagtttaaaaagaattaaattcctagttttggatgaggctgataga
ctactggaagggcggtttgatcatcagctcaagactatctttgaatcaataccagaaaag
aggcaaactcttctttttagtgctactttatcggattctttggacagagttaaagctatt
gccgatgaaaaggtttttatttggtcggcatcaaacgaggtggcaactgtagatcagctg
aaacaatcttatgttttgtgccctcctctggtgcgtgatggatatttgattgaaactatt
cgtacattcagatctcaagatgaaaacggttcaataatgatatttactgatacctgcaaa
aattgtcaattgctgtccatgacactgaatgaagttggctttgaaaatgttgcccttcat
gctatggcaaagcagaaagaacgccttgcagcactagctaagtttaaatcaaatgttgtt
aaaatactaattgctactgatgtagcaagtagaggattggacattcctgctgttcaactt
gttttaaatcacattctaccaaatgtgccgaaagaatatattcacagagtcggacgtacc
gcaagagcagggcgggaaggtctcgcagtctctttaatcacaccgcatgacatcaagctg
ctccatgctatcgaagaagccatcaacactaaacttactgagtacaaagttgatgataaa
gaagtttctaaaattgttactcaagtctcagttactaagagggaagcagaaataagatta
gatgaaaccgattattttgaaaggaaggctatcaacaaacggaagaaactcatccttgag
gggaaagatccagatgaagaggaggcgctggcagaaaagagaatgaaattgaagcgtaag
ttagcaagaaagcaggctaaagaggctgctaaaaatagaaaggtacctttgaaatctttt
gatgatgattcagattag
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