Thrips palmi (melon thrips): 117645552
Help
Entry
117645552 CDS
T08251
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117645552
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117645552
Spliceosome [BR:
tpal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117645552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
PRAI
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117645552
NCBI-ProteinID:
XP_034241729
UniProt:
A0A6P8ZN48
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MYGNGYPNQTMYPGGRQGRDRPNFDSFPGQGPQNWYPRGPMSKNVMQGKGSMGPGLISNN
APEHCDTGSHMLQTFNMNGSHNTMRAGQPPRFPRGDQQFKSRFWANSNQQNNGMKQDQTM
KNNLKNKQPGENLRKPQWDLNVLQQFAKDFYVPHSNVAGRSDDEVRVYRESREITVKGKN
VPNPNQAFEEGNFPEFVVQEILKQGFSEPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAY
MLPAAVHISNQPQLSRGDGPIALVLAPTRELAQQIQSVARDFGSSSLIRNTCVFGGAPKG
PQARDLERGVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQ
IRPDRQVLMWSATWPKEVQALAEDFLTDYIQINIGSLDLAANHNIRQIIEVCQEHEKEEK
LSKLLREINGKAIVFVETKKKVDDVTKLIQREGWQAISIHGDKSQPERDHVLAEFRSGKS
NILVATDVAARGLDVEDVKFVINFDYPNTAEDYIHRIGRTGRCLQSGTAYAFFTPNNQRQ
AKELIGVLQEANQPVNPALAELANMARSQYGGRNRWNKYSTKDNSNGDRNQNRQNGQNWH
SNNNDNRVNGMGNGMGNNSPRFSGPNANNYRNPGENRGNYQKSGFQNGYQNGYGQSNGYH
GQQNGYHGQQNGYHNQNGFAQNGYGGQNGYQNNRGFGNQGARSGFQNNRYNNRYNNNYAN
SQGGHNGQMFNMPPPFMMQPTADGGVQSLINNKFFQTNRPPQASGACAYQSMSPSAYGGY
QTPVAYYGYSQPQAVQQ
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcaacgggtatccgaatcagacgatgtacccaggtgggagacaaggacgggac
agaccaaactttgactcttttccggggcaagggccacaaaattggtatccaaggggccct
atgagtaaaaatgttatgcaagggaaaggttcaatgggcccagggctgataagcaacaat
gctccagagcactgtgacacaggcagccatatgctacaaacttttaacatgaatggatcc
cataataccatgagggctgggcagccaccccggtttcccagaggggatcaacaattcaaa
agccgcttctgggccaactcaaatcagcagaacaatggcatgaagcaggatcagactatg
aagaacaaccttaaaaacaaacaacctggggaaaatttgcgcaagcctcagtgggatctc
aatgttctccaacagttcgctaaggacttttatgttcctcactctaatgtggctggcagg
tcagatgatgaagtgagagtgtaccgtgagagccgtgaaataacagtgaagggaaaaaat
gttcccaatcccaatcaggcttttgaagaaggaaatttccccgagtttgtcgtgcaggaa
attctcaagcaggggttctctgaacctacacccatccaggctcaaggatggcccattgca
ttgtctggccgtgacatggttggcattgctcaaactggatctggaaagactttagcttac
atgctgccagctgctgtgcacatcagcaaccagcctcaactctcccggggagatggtccc
attgccctggtgcttgccccaaccagggagctggcgcaacagattcaaagtgttgcccgt
gactttggctcgtcatcactaatcaggaacacctgtgtgtttggcggtgcacccaaaggg
cctcaggctcgtgatttggaacgaggagttgaaattgtaattgccactcctggacgcctg
attgactttttggagagaggcaccaccaacctaaggaggtgcacttaccttgtgttggat
gaagccgatcgcatgcttgatatgggctttgagccgcaaatccgcaagatcattgagcag
attaggcctgacagacaagtgctcatgtggtcagcaacatggcctaaggaagtccaggct
ttggctgaagattttcttactgattacattcagatcaacattggatctcttgatctagct
gccaaccacaacattcgtcagattattgaagtctgtcaggagcatgagaaggaagagaag
ttgtcaaagctcctgagagaaatcaatggcaaggctattgtgtttgttgaaacgaagaag
aaggtggatgatgttacaaaactgatccagagagaaggctggcaagcaatcagtattcat
ggtgacaaatctcagccggagcgtgaccatgttcttgctgagttccgcagtggcaaatcg
aatatcttggtcgcaacagatgtagctgcgcgaggcttggatgtggaagatgttaaattt
gtcatcaacttcgactaccccaacactgctgaggactacattcatcgcattggacgtact
ggtcgatgcctgcagagtgggacagcgtatgcctttttcacccctaacaaccagcgccag
gctaaggaattgatcggagtgttgcaagaggccaatcaacctgtcaaccctgctttggct
gaattggctaatatggctcgcagtcaatatggaggacgcaaccgttggaacaagtacagt
accaaggacaattcaaatggtgaccgtaaccaaaatcgccaaaatgggcagaattggcac
agcaacaacaatgataacagggtgaatggcatgggaaatggcatgggcaacaactctcct
cgtttcagtgggcccaatgctaacaactaccgcaacccaggtgaaaaccgtggaaactac
cagaagagtggattccaaaatggataccagaatggctatggccagtcaaatggctaccat
gggcagcagaatggctatcatggacagcagaatggttaccacaatcagaacggatttgcc
caaaatggatatggaggccagaatggctaccagaacaaccgcggatttggtaatcaaggt
gctcgcagcggattccagaacaaccgttacaacaaccgatacaacaacaactatgccaac
agtcaaggaggccacaatggtcaaatgttcaacatgccgcctccattcatgatgcagcca
acagctgatggtggcgtgcagagcctgatcaacaacaagtttttccagaccaacaggccc
ccacaggccagcggagcctgcgcataccaaagtatgtctccgagtgcttatggaggctac
cagaccccagtggcttattacggctactctcagccacaagctgtgcagcagtag
DBGET
integrated database retrieval system
