Thrips palmi (melon thrips): 117645554
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Entry
117645554 CDS
T08251
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03013
Nucleocytoplasmic transport
tpal03015
mRNA surveillance pathway
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117645554
09122 Translation
03013 Nucleocytoplasmic transport
117645554
03015 mRNA surveillance pathway
117645554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117645554
03041 Spliceosome [BR:
tpal03041
]
117645554
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
117645554
Spliceosome [BR:
tpal03041
]
Common components
Common spliceosomal components
Cap binding complex
117645554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
AATF-Che1
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
117645554
NCBI-ProteinID:
XP_034241731
UniProt:
A0A6P8YWT3
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MSRRRPHDDDDGYERAHRKRRRVSENQEIEDRLETLILRIGEKSTASLESNLEGLASVLE
ADLASFKAKILRILSECAIKMPEKCTVYTTLVGLLNAKNYNFGGEFVEHMVRNFKEALKN
CRWDAARYSLRFLADLVNCHVIAATSLIQLLDNMVDVAKEEGVPNVRKDWYVYSVLSALP
WVGRELYEKKESQLEMLLVKIEVFLNKRSKKHHTALRVWSQDTPHPQEEYLDCLWAQVRK
LRQDNWVEKHIPRPYLAFDSILCEALQHNLPTLLPPPHDPSFEYPMPWVVFRMFDYTDCP
EGPILPGAHSIERFLIEEHLHQILEVNHLERKDCAANLLNFPYKTKIPLEYSIVEIIFAE
LFHMPTPRYLEICYGSILIELCKLQPSTMPQVLAQATEILFMRIDTMNVTCFDRFVAWFS
YHLSNFQFRWSWDDWDFCLQLDLEHPRPKFVKEVLQKALRLSYYQRIKEIMPEVYEPLLP
PKPEPDYKYTHDNAASLPGTTAAHQMVVAVRQKCTPEEVLNVLADLPNPRQDAEVEGEGA
FNPLKIDVFVQTLLNLGSKSFSHSFAAIGKFHFIFKSLAESEEAQICILRNLFSLWKNHQ
QMICVLIDKMLKLQIIECSAVANWIFSREMQSEFTKVYIWEVLHLTIRKMNKHVSRLQRE
LSEARDKIRRHDSDSESEDDRKRRREDHDEKDKPSEEMVERMEEKLEAAQADQKNLFLII
FQRFIMILSEHLVRCDTDNKDYNTFWYKWTIGRLQQVFLAHNEQVQKYSSTLETLLFTQD
LDSHIMDVFHQFTSLRS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcagaagacctcatgatgacgacgacggttatgagcgtgctcaccgcaagagg
aggagggtatcagagaaccaagaaatcgaggatcgcttggagactcttatcctccgaatt
ggagaaaagagtactgcctcgttggagagtaatttggaaggactagcaagtgtacttgaa
gctgatttggccagcttcaaggccaagatcctccgtattctttcagaatgtgcaatcaaa
atgccggaaaagtgcactgtctataccacattagtgggtcttctgaatgccaagaattac
aattttggaggagagttcgtcgaacatatggtcaggaactttaaggaggcattgaaaaac
tgtcgttgggacgccgctcgatattctcttcggtttttggcagatctagtaaattgccat
gttattgctgcaacttccttgattcaattgcttgacaacatggttgatgttgctaaagag
gagggtgtccccaatgtccgcaaagattggtatgtttattctgtcttatcggccttgcca
tgggttggcagagaattatatgagaaaaaagaatctcaacttgaaatgcttctggttaag
atagaggttttccttaacaaaagaagtaagaagcaccatacagctttgagagtttggtct
caagataccccacatcctcaggaggagtacctggattgtctgtgggctcaagtccgaaag
ctgcgtcaggacaactgggttgaaaaacacataccaagaccatatttggcatttgacagc
attctttgcgaagctctgcagcacaacttgcctactctccttcctcctccacatgatcct
agctttgagtaccctatgccttgggttgttttccgaatgtttgactacactgactgccca
gagggtccaattttgcctggggcccattctattgaaagattcctaattgaagaacatttg
catcaaatattagaagtgaatcacctagaaaggaaagattgtgctgctaatttattgaat
tttccatacaagacaaagattcctttggaatattctattgtggaaattatttttgctgag
ttattccacatgcccactcctcgttaccttgaaatctgctatggttccattcttattgaa
ctgtgcaagctgcagcctagtacaatgccgcaagttctagcccaggcaacagaaattctt
ttcatgcgcatagataccatgaatgttacatgctttgatagatttgttgcatggttttct
tatcacttaagcaacttccaattccgttggtcttgggatgattgggatttctgtcttcag
cttgatctggagcaccccagaccaaaatttgtcaaagaggtgctgcagaaggctttacgc
ctctcatattatcagaggataaaagaaatcatgccagaagtttatgaaccactgttgcct
ccaaagccagagccagattacaaatacacccacgataatgctgcgtcgctccccggcacg
acggccgcccatcagatggtggtggcggtgcggcagaagtgcacccccgaggaggtcctc
aacgtcctggccgacctgcccaacccccggcaggacgccgaggtggagggcgagggcgcc
ttcaaccccctcaagatcgacgtgttcgtgcagacgctgctcaacttgggctccaagagt
ttctcgcactcgttcgccgccatcggcaagttccacttcatctttaagtctctcgccgag
tctgaggaggcccagatctgcatcctgcgaaatctcttctccttgtggaagaaccaccag
caaatgatttgtgtgctgattgataaaatgctcaagctgcaaattattgagtgttctgcc
gttgctaactggatcttttcaagagagatgcagtcagagttcaccaaggtgtatatatgg
gaagtcctccacctgaccatccgaaaaatgaacaaacatgtttcaagactacagagggaa
ctgtcagaagcaagggacaaaattcgtagacatgacagtgatagtgagagcgaggatgac
aggaagcgaaggagggaagaccatgatgagaaagataagccatcagaagaaatggttgag
cgaatggaagaaaagctggaagctgcccaagctgaccaaaagaatcttttcctgatcatt
ttccagagatttatcatgattttgtctgagcatcttgtccgatgtgataccgacaacaaa
gactacaacaccttctggtacaaatggaccattggccgtcttcaacaagtattccttgct
cataatgagcaagtccagaagtacagctctacacttgaaaccctgctcttcacacaagac
ttagattcacatatcatggacgtattccatcagttcacatcactgaggtcatag
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