Thrips palmi (melon thrips): 117646001
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Entry
117646001 CDS
T08251
Name
(RefSeq) dynein intermediate chain 2, ciliary
KO
K10409
dynein axonemal intermediate chain 1
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117646001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tpal03037
]
117646001
04812 Cytoskeleton proteins [BR:
tpal04812
]
117646001
Cilium and associated proteins [BR:
tpal03037
]
Motile cilia and associated proteins
Dynein arm
117646001
Cytoskeleton proteins [BR:
tpal04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117646001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_WDHD1_1st
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
PEP5_VPS11_N
Beta-prop_WDR11_1st
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
117646001
NCBI-ProteinID:
XP_034242495
UniProt:
A0A6P8YXX3
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MPRSKPVLRPGTSVLKNKASGVKLHGTQGGEGSRVDLEDAENWGRARTLIKPDDQLELSE
AELKEEIARVLTIRTPQLSEGLVIWSHKDAAFVQRAVPAAGVLVLDMPSTCLHIDSAEAR
EQAAYLGSAGRITLAETMTVTKAVPKAVKKESRKGGAEDEEEDEEGDGEGDGDGDGEGEG
EGKEHAGSLSDGAGDAPVQGSETNLQKDEAGDGQAKADASTEAIEGAGEGDEAGVEAGEG
DEASTADGEDGAEDGDAAAEALPSRPVKKVANQFNFCDRAALTYNNPYRTLSTQTEPPPR
DTFSEQVMQWIIYDAYAKDWEDKQAGKEKEVKAVPKQFGRQAERKLDERTNPNSSLNRSI
RAAKTIERMLNQNTSDDIAKDCRYYEDGSDEFREGAGTLLPLWKFFYEPTKKFHVTNICW
NPRYHDMFAVTMGYLEFMKQSPTGAVCVFTMKNPSYPEYVLHTTSSVMTAEFHHEQVNLL
AVGLYDGSVAVYDLQLSSTQQEPVFRSDSVHNKHCDMVWQVTWGQDTPDGELNLYSVSND
GQVFNWVLTSSTLHQTTVISLVLERSAPVAGPDGTTLTITGCGTAIAFHPTNPKVFLVGT
EEGQVFKCSTEYTSMYLLSYGAHHMPVHRIHFNYYLPDIFITCSADWRIKIWEDGRTEPL
FVFDLHCSVGDVQWAPYSSTVFAAVTLDGKAHVYDLNVSRYQPICVQNIVSRKKNRLTRL
AFNKKHPIIVVGDERGTVTSLKLSPNLRVKPKATKKQAHLTPHELEVLKMDKLLALVREP
FILQRPADTDQPPE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctccaagccggtcttacggccggggacctcggtcctgaagaacaaggccagc
ggcgtgaagctgcatggcactcagggcggcgaggggtcccgcgtggacctcgaggacgcg
gagaactgggggcgagcgaggaccctgatcaagcccgacgaccagctggagctcagcgag
gcggaactcaaggaggagatcgcccgcgtgctgaccatccggacgccgcagctgtccgag
gggctggtcatctggtcgcacaaggatgccgcgttcgtgcagcgcgccgtgcccgcggcc
ggcgtcctggtgctggacatgccgtccacgtgcctgcacatcgacagtgccgaggcgcgc
gagcaggccgcctacctgggcagcgcgggccgcatcacgctggccgagaccatgaccgtc
accaaggcggtgcccaaggccgtcaagaaggagagccgcaagggcggcgccgaggacgag
gaggaggacgaggagggcgacggcgagggcgatggggacggcgacggcgaaggcgagggc
gagggcaaggagcacgccggcagcttgagtgacggcgccggcgacgctcctgttcaaggg
tccgagacgaacctccagaaggacgaggcgggggacgggcaggccaaagccgacgccagc
accgaggccatcgagggggcgggggagggcgacgaggccggcgtcgaggccggcgagggc
gacgaggcctccacggcggacggcgaggacggcgccgaggacggtgacgccgcggccgag
gctctgcccagccggcccgtcaagaaggtcgccaaccagttcaacttctgcgaccgcgcc
gcgctcacctacaacaacccctacaggacgctgagcacgcagacggagccgccgccgaga
gacacgttctccgagcaggtcatgcagtggatcatctacgacgcgtacgccaaggactgg
gaggacaagcaggccggcaaggagaaggaagtcaaggcggtgccgaagcagttcgggcgg
caggccgagcgcaagctggacgagcgcaccaaccccaactcgtcgctgaaccgctccatc
cgcgcggccaagaccatcgagcgcatgctcaaccagaacacgtccgacgacatcgccaag
gactgccgctactacgaggacggctccgatgagttccgcgagggcgcgggcacgctgctg
ccgctctggaagttcttctacgagcccaccaagaagttccacgtgaccaacatctgctgg
aacccgcgctaccatgacatgttcgccgtcaccatgggctacctggagttcatgaagcag
tccccgaccggcgccgtgtgcgtgttcaccatgaagaacccgtcgtaccccgagtacgtg
ctgcacaccacgtcctccgtgatgacggccgagttccaccacgagcaggtgaacctgctg
gccgtggggctgtacgacggcagcgtggccgtgtacgacctgcagctgtcctccacgcag
caggagcccgtcttcaggtccgactcggtgcacaacaagcactgcgacatggtgtggcag
gtgacgtggggccaggacacccccgacggcgagctcaacctgtactccgtgtccaacgac
ggccaggtgttcaactgggtgctgacgtccagcacgctgcaccagaccaccgtcatctcc
ctggtcctggagcggagcgcgcccgtcgccggcccggacgggaccaccctcaccatcacc
ggctgcggcacggcgatcgcgttccaccccaccaaccccaaagtgttcctggtgggcacg
gaggaggggcaggtgttcaagtgcagcacggagtacacgtccatgtacctgctgtcgtac
ggcgcgcaccacatgcccgtgcaccgcatccacttcaactactacctgcctgacatcttc
atcacctgctcggccgactggcgcatcaagatctgggaagacggtcgcacggagccgctg
ttcgtgttcgacctgcactgctcggtgggggacgtgcagtgggcgccgtactcgtccacc
gtgttcgcggccgtgaccctggacggcaaggcgcacgtctacgacctcaacgtgagccgc
taccagcccatctgcgtgcagaacattgtgtcccggaagaagaaccggctcacgcgcctc
gccttcaacaagaagcacccgatcatcgtggtcggcgacgaacgggggacggtgacatcg
ctgaagctgtcgccgaacctgcgcgtcaagcccaaggccacgaagaagcaggcgcacctg
acgccgcacgagctggaggtgctcaagatggacaagctgctggccctggtccgggagccc
ttcatcctgcagcggcccgccgacacggaccagccccccgagtag
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