Thrips palmi (melon thrips): 117646125
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Entry
117646125 CDS
T08251
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03440
Homologous recombination
tpal03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117646125
03460 Fanconi anemia pathway
117646125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpal03032
]
117646125
03400 DNA repair and recombination proteins [BR:
tpal03400
]
117646125
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117646125
DNA replication proteins [BR:
tpal03032
]
Eukaryotic type
DNA Topoisomerases
117646125
DNA repair and recombination proteins [BR:
tpal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117646125
FA (Fanconi anemia) pathway
117646125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Fib-H_N
zf-CCHC
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
117646125
NCBI-ProteinID:
XP_034242734
UniProt:
A0A6P8ZNP9
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MTLWVTLILKSRKDFLRSLHVQCSWFSKAHQNCSDPPATMKILNVAEKNDAAKNIAQQLS
RGTCTRRDGLSKFNKIYEFNYNVRGQNAEMIMTSVSGHLLGLDFAGQYRQWQGCSPVALF
DAPVFTKCIENYENIKRTLEREVRSCQMLIIWTDCDREGERIGFEIIETCQAIKPNIQVF
RARFSEITLPSVQRAINNLEAPNRLLNEAVCVRQELDLRIGAAFTRFQTIRLRQVFPTTL
QDKLISYGSCQFPTLGFVVERFKAIENFIPERFWKIVLSHTVDELTVNFSWKRVRLFEEL
ACQVLFDKVQEHNGAIVEKVVSKPKSKWRPLPLDTIELEKLGSKKLKINAKETMTIAERL
YMQGYISYPRTETNIFPKTMNLPNIVEQQTRDNQWGAFAQNLLQDGPNPRQGKKSDEAHP
PIHPTKYADNLQGNDRKVYEFVVRHFLACCSKDAQGHETIVDIDVNGEKFVASGLRIIAR
NYLDVYPYENWKAKEIHPYEEGQRFQPTKIEMGASETGPPNLLTEADLIALMEKHGIGTD
ATHADHIETIKNRDYVGLEQIYFLPGKLGLGLVDGYDSMGFAMSKPNLRAELEADLQRIV
DGTRNPQEVLAEQIQNYKRVFEQAMEQAAKIDAALAVHLEEQGQPVIENAVRREFRKVCS
CPSCGQDMVIKTKRDGGFYLSCMGYPACRATIWFPASVEQADVSDEVCENCTTRPQKICF
RFKSRMFAPHYPDNYVGCVGGCEVNLVELLGIRSLKELAPRNADVQRNGNPARNTQNANT
QDSGFGSLGNASSGIRRGVGNSSRGNESTIGARGAGSGNSNGGLVPRRQNTNVGDNAIVC
PCNVEAVQRTVRKEGANQGRPFYRCASDSCNFFMWADEGQAAPQGGRNFHQTTLSNFSHV
NNDNSSGSGVTCDCGEPAKSLTVLKDGPNKGRGFYACPKPRETQCKFFQWADEEGASGGG
GGGGGGGGGGGGGGGGGSLRQANNNFNDRGQGGDGGSGLTCNCGDPVRSLTVQKDGPNKG
RVFYACSKPMSSKCNFFVWADEAGQTTGGREGGVGGGGGSGRGRGSGRGRARGSSSSWRG
AGGSRGGTSSNSSKGSKRKCGNCGQEGHFKPKCPNMQ
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgactttatgggtaacattgattttgaagtcacggaaagattttctgcggagtctgcat
gtccagtgcagctggttttccaaagctcaccaaaactgcagtgatccacctgctaccatg
aaaatactcaatgtcgcagagaaaaatgatgcggccaaaaacatagcccaacagctgagt
agaggaacatgcactaggcgagatggcttgagcaaatttaacaaaatttatgagttcaat
tataatgttcgaggacaaaatgctgaaatgattatgacatctgtatctgggcacttactg
ggacttgattttgctggtcagtacaggcaatggcaaggctgcagtcctgttgcattgttc
gatgcccctgttttcacaaaatgtatagaaaattatgaaaacatcaagcgaactcttgaa
agagaagtacgcagctgtcaaatgcttattatatggactgattgtgatagagaaggagag
cgcattggatttgaaataattgaaacgtgtcaagccattaaacccaatatccaagtgttt
agagccagattttctgaaataacccttccttctgtccagagggctattaacaacttagaa
gctcctaacagacttttaaatgaggctgtctgtgtaagacaagagttagatttgagaata
ggagctgcctttacaaggtttcaaaccatccgcctgcgacaggtattcccaacaactctt
caagacaaattgattagttacggatcctgtcagtttccaactcttggttttgttgtggaa
cgctttaaagctatagaaaatttcattcctgaacgtttctggaagattgttcttagccac
actgtagacgaattaactgttaatttttcttggaaaagagtgagactatttgaagaactt
gcttgccaagttttgtttgataaggttcaagagcacaatggagccattgttgagaaagtt
gtgagcaaacctaaaagcaaatggagacctcttccactagacactattgaattggaaaaa
ttaggatctaaaaagttgaaaattaatgccaaggaaactatgacaatagctgagcgtttg
tatatgcagggatatataagttatcctcgcacagaaactaatattttccctaagactatg
aacctacccaacatagttgaacagcaaactcgtgacaaccagtggggagcatttgcccag
aacctccttcaggatggcccgaatcctcgccaaggaaagaaatctgatgaggcccatccc
cccattcatcccacaaaatatgccgacaacttgcaaggaaatgacaggaaagtttatgaa
tttgtagtgcgccattttttagcatgttgttcaaaagatgcgcaaggccatgagactatt
gtagacattgatgtcaatggtgagaagtttgtagccagtggtttaagaataattgctcgt
aattacctggatgtgtatccatatgaaaattggaaagcgaaagaaatccatccttacgaa
gaaggtcaaagattccagcctacgaagattgaaatgggagctagtgagacaggtcctcct
aatcttttgactgaagccgacttgattgctcttatggaaaagcatgggataggcactgat
gcaacacatgcagaccacattgaaacaatcaagaaccgtgactatgttggtctagaacaa
atatactttttgccaggaaaattaggtttaggacttgttgatgggtatgatagcatgggc
tttgctatgtccaaaccaaatctacgtgcagagctggaagcagatcttcagaggattgtg
gatggtacccgtaatccgcaggaggttctagcagagcaaattcaaaactacaagagagta
tttgagcaagccatggaacaggctgctaaaattgatgcagctttagctgtgcatttagag
gaacaagggcagcctgttattgaaaatgctgtaagacgtgagtttagaaaggtttgttct
tgcccatcatgtggacaagacatggtgatcaagactaaaagagatggtggcttttattta
tcttgcatgggctatccagcttgccgtgcaacaatttggttccctgcatctgtagagcag
gcggatgtttcagatgaagtttgtgaaaattgtactacaagacctcagaaaatctgtttt
agattcaaatctagaatgtttgctccgcactatcctgacaattatgttggttgtgtggga
gggtgtgaagtaaacttggtagaacttcttggaatacgttcactgaaagagttagcccca
aggaatgcagatgttcaaagaaatgggaatccagctagaaacactcaaaatgccaacact
caagacagtggatttgggagtttggggaatgcctcttctggtatcaggaggggggtagga
aattcctcaagaggcaatgaaagcacaattggagccagaggtgcaggttcaggcaactcc
aatggtgggcttgtcccaagaaggcagaacacaaatgttggtgataatgccattgtgtgc
ccgtgcaatgtggaagctgttcagcggactgtccggaaagaaggagctaatcaaggtcgt
cctttttacaggtgtgctagtgatagctgtaatttttttatgtgggcggatgaaggccaa
gcagcacctcaagggggcagaaatttccatcaaaccaccttatctaatttcagtcatgtt
aataatgataatagcagtggcagtggagtgacatgcgactgtggtgaaccagctaaaagc
ctcactgttctgaaagatggccctaacaaaggtcgtggtttctacgcttgcccaaaacca
agggaaactcagtgcaaatttttccaatgggctgatgaggaaggtgcctctggcggcggc
ggcggtggcggcggcggtggcggcggcggcggtggcggcggcggtggcgggtctctcaga
caagccaataataattttaatgaccgtggtcaaggtggcgatgggggcagtggattaaca
tgcaactgtggtgatccagttagaagcctcactgttcagaaagatggccctaacaaaggt
cgtgtgttctacgcttgctctaaaccaatgagctccaagtgcaacttctttgtctgggct
gacgaagctggtcaaacaacaggaggaagagaaggcggcgtaggtggcggtggcggaagc
ggtagaggcaggggatcaggtcgaggaagagcaagaggcagcagctcaagctggagagga
gcaggcggaagtaggggtggcacctcgagtaatagctctaaaggcagtaagaggaaatgt
ggtaactgtggacaagaaggtcattttaagcccaaatgcccaaatatgcaatga
DBGET
integrated database retrieval system
