KEGG   Thrips palmi (melon thrips): 117646545
Entry
117646545         CDS       T08251                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117646545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpal03041]
    117646545
Spliceosome [BR:tpal03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117646545
 Complex B
    117646545
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_9
Other DBs
NCBI-GeneID: 117646545
NCBI-ProteinID: XP_034243466
UniProt: A0A6P8Z1G8
LinkDB
Position
Unknown
AA seq 442 aa
MGEDSKDRDRDKERDRDKERRRRSRSRDHKKRSRSRDRSRERRKRSRSPVGSPKKDKRSR
RRKPSMYWDVPPPGFEHITPMQYKAMQAAGQIPANLVTETPQAAVPVVGSTITRQARRLY
VGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAM
AFDGINFKGQSLKIRRPHDYQPMPGMSENPSVTVPAYDSLFAAGVISTVVPDSPHKIFIG
GLPNYLNEDQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYFDVSMTDQAIAGLHGMQ
LGDKKLIVQRASVGAKNAQIGQQAPVQIQVPGLTMVGAAGPATEVLCLLNMVTPDELRDE
EEYEDILDDIREECGKYGVVRSLEIPRPIEGVDVPGCGKVFVEFNSIVDCQKAQQSLTGR
KFNNRVVVTSYFDPDKYHRREF
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgggggaggatagcaaggaccgtgatcgcgataaggaaagggacagggacaaggagagg
cgtcgccgatctcgttctcgggaccacaagaaacgatcacgcagccgagatcgcagtcga
gagagaaggaaaagaagccgctcaccagtagggtcaccgaagaaggataaacgatcaaga
agacgaaagccgtccatgtactgggatgtcccgcctccaggctttgagcatatcacacct
atgcagtataaggccatgcaagctgccggacagattcctgctaatctggtcactgaaaca
ccgcaagcagcagttcctgttgttggatctaccattaccaggcaagctcgtcgcttgtat
gttggtaacataccatttggtgtcacagaggaagagatgatggagtttttcaaccagcaa
atgcatttgtctggtttggcccaggcagcaggcaatcctgtcctagcatgtcaaattaat
ttggacaaaaattttgccttcctagagttccggtccattgatgaaacaactcaagccatg
gcctttgatggaatcaacttcaaggggcagagtttgaagatccgcagacctcatgattac
cagcctatgcctgggatgtcagaaaatccttcagttactgttccagcttatgattctctg
tttgcagctggggttatcagtacagttgtcccagattcacctcataagattttcattggt
ggcctacccaactaccttaatgaagaccaggtcaaggagcttttgatgtccttcggtcaa
cttcgtgcattcaatttggtgaaggactctgcaactggactcagcaagggttacgccttc
tgtgaatattttgatgtctccatgactgaccaggctattgctggtcttcatggaatgcaa
ttgggagacaagaaactgattgtacaacgggcgagtgttggtgccaagaatgctcaaatt
ggccagcaagctccagtgcaaatccaagtacctggtctcactatggtgggcgctgctgga
cctgccacagaggttctttgtctgctgaatatggtgacacctgatgaactacgtgatgag
gaagaatatgaagacatccttgatgatatcagagaagagtgtggcaagtatggtgtcgtt
cgttcactggaaatccccaggcctattgaaggagtcgatgtcccaggctgtggaaaagtt
tttgttgagtttaattcgattgtggattgtcagaaagcacagcaaagtctcacagggcgt
aaattcaacaacagagttgttgtcacatcttactttgaccctgataaatatcatcgccga
gaattttaa

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