KEGG   Thrips palmi (melon thrips): 117646819
Entry
117646819         CDS       T08251                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117646819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpal03400]
    117646819
DNA repair and recombination proteins [BR:tpal03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     117646819
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 WDR54 Beta-prop_HPS5 Beta-prop_VPS8 WD40_RFWD3 RAWUL Beta-prop_Nup120_160 WD40_like
Other DBs
NCBI-GeneID: 117646819
NCBI-ProteinID: XP_034243940
UniProt: A0A6P8Z1S6
LinkDB
Position
Unknown
AA seq 671 aa
MMTHKTSGSSGKKKVQVSYVIRDEIEPRHRSGVNSLQYSASIQRLYSAGRDGIIRVWNPS
NMKDPLALSMEHHTDWVNDVVLCCGGRNLISASSDTTVKVWNAHKGFCMSTLRTHKDYVK
ALAYAKDREQVASAGLDRAIFLWDINTLTALTASNNVVTTSSVSGNKDSIYSLAMNPSGS
VIVSGSTEKVLRVWDPRTCTKLMKLKGHKDNVKALAVNKDGTQCLSGSSDGTMKLWSLGQ
QRCMQTFHVHDEGVWALLVNDAFTQVLSGGRDRKIFMTDLRNPDRRVLICEESEPILKMI
ATPDQTGVWVATSTSPIKLWNLPKPSTLSESSHPMDYDEAPKPYNSKPDLIIKGGAAIRQ
FNILNDKRHIVTKDTENNVAVYDVLKAVKTEDLGVVDYEEEIKKRHKVIYVPNWFNVDLK
TGMLTIHLGQDENDCFSAWVSTKEAGLSSGEAADQKVNYGNLVLQALLEHWWRPLSNDEE
TDGQGDTPNTGNNTHTRGGNEYFSVPSHTPVILSEVGGRTLYRLLARDAGGETEGVLLNE
TVPAWVVDIVMEKTLPVFIKIPFYLLPHGSSGMRTKKDRLIANDFIQVRKVAEHVLEKVL
GAGSESGSVAAGPANADKESEDVQDSSSLAEEKVELLCNDIMLEPNMDLRTVRHFIWKSS
SDLVLHYRPVK
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgatgactcacaaaactagtgggagcagtggcaagaaaaaagttcaagtttcctatgtc
atcagagatgaaatagagccaagacatcggtctggtgtgaattcattgcaatactcggct
tctatccagagactttattcagctggacgcgatggtatcattagggtgtggaaccctagt
aacatgaaagaccctctcgccctgtctatggagcatcatacagactgggtcaatgatgtt
gtactctgttgtggaggtcgaaacttaatatctgcaagctcagacacaactgtcaaagtc
tggaatgctcacaaaggcttttgtatgtcaacacttcgtactcataaggattatgttaaa
gctcttgcgtatgctaaagatagagaacaagttgcatctgctgggttggatagagcaatc
tttctttgggacataaacaccttaacagctctgactgccagcaacaatgttgtaacaact
tcatctgtaagtggaaataaggattcaatttatagcttagcgatgaatccatctggcagt
gtcattgtcagtggttctactgaaaaagttctcagagtatgggatcctcgcacgtgcact
aaattgatgaagcttaaaggtcataaggataacgtcaaggctttagctgtgaataaagat
gggactcaatgcctttctgggagctcagacggtacaatgaaactatggtcattgggccag
caaaggtgcatgcagacattccatgtgcatgatgagggagtttgggcccttttggtcaat
gatgcatttacacaggtcttgtctggtggtagagatcgtaaaatttttatgactgatctg
cgaaatccagacaggagggttttaatatgtgaagaatctgaaccaattctaaagatgata
gcaacaccggatcagacaggagtttgggttgctacatcaacttcacctatcaaactctgg
aaccttcctaaaccctccactctgtctgagagtagtcatcctatggattatgacgaagct
ccaaagccatataattctaagccagatctcatcatcaagggtggagctgccatacgtcaa
tttaacatattaaatgataaacggcacattgttaccaaagacacagaaaataatgtggct
gtttatgatgttcttaaggctgtcaaaactgaagatttaggtgtagttgattatgaagaa
gaaataaagaagaggcacaaggtgatttatgttcccaactggtttaatgttgatctcaaa
acagggatgcttacaattcacttgggacaggatgaaaatgactgcttctctgcctgggtt
tctactaaagaagcaggtctttcctcaggagaagctgctgaccaaaaagtcaactacggg
aatcttgtgcttcaagctcttcttgagcattggtggcgacccttatcaaatgatgaagaa
acagatggtcaaggcgacactccaaatactggaaacaatactcacactagagggggaaac
gaatacttctcagtcccatcacatactcctgtcattcttagtgaggttggtggcagaact
ctgtatcggctccttgcaagagatgctggtggtgagactgagggagttcttttgaatgaa
acagttccagcctgggtggttgatattgttatggagaagaccctgccagttttcatcaaa
ataccattttatttattacctcatggatcgtcaggaatgcgaacaaaaaaggataggttg
attgcaaatgattttattcaagtccgtaaagttgcggagcatgtactggagaaggttctt
ggagcagggtccgaaagcggctctgtagctgcaggccctgccaatgctgacaaggagtct
gaggatgttcaggactccagctccctggccgaagaaaaagtggaacttctttgcaatgac
attatgctggaaccaaacatggatctgcgaacagtgcgtcacttcatctggaaatcttca
tctgacctcgtactccactaccgaccagtgaaatga

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