Thrips palmi (melon thrips): 117647031
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Entry
117647031 CDS
T08251
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117647031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117647031
Spliceosome [BR:
tpal03041
]
Complex C
Other components
Step II factors
117647031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
PQQ_2
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
117647031
NCBI-ProteinID:
XP_034244403
UniProt:
A0A6P8YWA8
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MLELQAYGSGSDSDGEPQNDAEPTALHLQPMDTSLKSKMVALCAAPHVVPLGANDPRPLV
DRTTKEISFNLKYEDLFAPELGPQNPNQTQQQKAARNMLSGFVEAAHMDAFQFENQRRTF
TSYGYALDPSVDANTVEGAKSIGSDLALQEAGGKTVFESTSKRPLDKRKRNKNDNPDDIE
GFLGPWGTYVDEKRVMKPNEEESAELEEILAKRQKKGKQIDERPLEEKTVLHIKEPFDYQ
GRSFMHPPQDVGVNLKSEVPPDRCFLPKNLIHTWEGHTKGISAIRWLPKTAHLLLSCSMD
CRVKIWEVYNDRRCVRTYYGHRQAVRDIAFNNTGTHFLSAAYDRYVKLWDTETGECVSRF
TSRKTPYCCKFHPDEDKQHLFVAGTSDKKIICWDTRSGEIVQEYDRHLGSVNTITFVDEN
RRFVTTSDDKSLRVWEWDIPVDMKYIADPSMHSMPAVTLSPNYKWLACQSMDNKIVVFSA
LNRFKMNRKKTFSGHMVAGYACSIDFSPDMSYVISGDADGKVYVWDWKTTKLFKKWKAHD
GVCISTLWHPHEPSKVVSAGWDGVLKFWD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgctggagctccaagcgtacggcagtggcagcgacagtgacggtgagcctcaaaatgac
gcagagccgacggcgctacacctgcaacccatggacacttcgttaaaatcgaaaatggtt
gctctctgtgctgcgcctcatgtcgtaccactgggtgccaacgatccccgcccacttgtc
gataggaccactaaagaaatttcatttaaccttaagtatgaagacctgtttgctcctgaa
ctgggacctcaaaatcccaatcaaactcagcagcagaaagcagcaaggaatatgttgtca
gggtttgtggaggctgctcacatggatgctttccagtttgagaatcagcgccgaacattt
acaagctatggttatgcattagaccccagtgtagatgcaaacactgttgaaggtgccaaa
tccattggctcagacttagcactgcaggaagctggaggtaaaacagtgtttgaatcaact
agcaaacgacctctggataaacggaaaagaaataagaatgacaacccagatgacatagag
gggtttttgggtccttggggcacctatgttgatgaaaagagagttatgaaacccaatgag
gaagagtctgcggaactagaagagatcttggctaaaagacaaaagaaaggaaaacagatt
gatgaaaggcctctggaagaaaagacagttctacacatcaaggaacctttcgactaccaa
ggccgttcatttatgcatcctcctcaggatgttggggtgaatctgaaatcagaagttccc
ccagatcgttgcttcttgcctaagaatcttattcatacatgggaaggccatacaaaagga
atatctgctatcagatggttacccaaaacagctcatttgctgctgtcttgtagtatggat
tgcagagtaaagatttgggaagtttacaatgatcgccgttgtgtcagaacttactatgga
catcgccaagctgtccgtgatattgcattcaacaacactggaacacatttcttgtctgct
gcttatgatagatatgtcaaattatgggatactgaaaccggagagtgtgtatctcgattc
accagccgaaaaaccccatactgctgtaaatttcatcctgatgaagataaacagcacctg
tttgttgccggaacgtcagacaagaaaatcatctgttgggatacacgttctggagaaatt
gttcaggaatatgatcggcacttgggctcagttaataccattacttttgttgatgaaaac
cgtcgcttcgttacgacttcagatgacaagagtttgagagtgtgggaatgggacattcct
gtggacatgaagtacattgcagaccccagcatgcactcaatgccagcagtaacactctcc
cctaattacaagtggttagcctgccagtccatggacaacaagattgttgttttctctgct
ctgaaccgattcaaaatgaataggaagaagactttctctggtcacatggttgcaggatat
gcttgctccattgacttttcacctgatatgagctatgtcatttctggagatgccgatggg
aaagtttatgtatgggattggaagacaaccaagcttttcaagaaatggaaagctcatgac
ggtgtttgtatttcaactttgtggcatcctcatgagccgagtaaggttgtctctgcaggc
tgggatggtgttctcaaattttgggattag
DBGET
integrated database retrieval system