KEGG   Thrips palmi (melon thrips): 117647031
Entry
117647031         CDS       T08251                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117647031
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpal03041]
    117647031
Spliceosome [BR:tpal03041]
 Complex C
  Other components
   Step II factors
    117647031
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_NOL10_N PQQ_2 Beta-prop_DCAF12 WD_LRWD1 Beta-prop_HPS5 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 117647031
NCBI-ProteinID: XP_034244403
UniProt: A0A6P8YWA8
LinkDB
Position
Unknown
AA seq 569 aa
MLELQAYGSGSDSDGEPQNDAEPTALHLQPMDTSLKSKMVALCAAPHVVPLGANDPRPLV
DRTTKEISFNLKYEDLFAPELGPQNPNQTQQQKAARNMLSGFVEAAHMDAFQFENQRRTF
TSYGYALDPSVDANTVEGAKSIGSDLALQEAGGKTVFESTSKRPLDKRKRNKNDNPDDIE
GFLGPWGTYVDEKRVMKPNEEESAELEEILAKRQKKGKQIDERPLEEKTVLHIKEPFDYQ
GRSFMHPPQDVGVNLKSEVPPDRCFLPKNLIHTWEGHTKGISAIRWLPKTAHLLLSCSMD
CRVKIWEVYNDRRCVRTYYGHRQAVRDIAFNNTGTHFLSAAYDRYVKLWDTETGECVSRF
TSRKTPYCCKFHPDEDKQHLFVAGTSDKKIICWDTRSGEIVQEYDRHLGSVNTITFVDEN
RRFVTTSDDKSLRVWEWDIPVDMKYIADPSMHSMPAVTLSPNYKWLACQSMDNKIVVFSA
LNRFKMNRKKTFSGHMVAGYACSIDFSPDMSYVISGDADGKVYVWDWKTTKLFKKWKAHD
GVCISTLWHPHEPSKVVSAGWDGVLKFWD
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgctggagctccaagcgtacggcagtggcagcgacagtgacggtgagcctcaaaatgac
gcagagccgacggcgctacacctgcaacccatggacacttcgttaaaatcgaaaatggtt
gctctctgtgctgcgcctcatgtcgtaccactgggtgccaacgatccccgcccacttgtc
gataggaccactaaagaaatttcatttaaccttaagtatgaagacctgtttgctcctgaa
ctgggacctcaaaatcccaatcaaactcagcagcagaaagcagcaaggaatatgttgtca
gggtttgtggaggctgctcacatggatgctttccagtttgagaatcagcgccgaacattt
acaagctatggttatgcattagaccccagtgtagatgcaaacactgttgaaggtgccaaa
tccattggctcagacttagcactgcaggaagctggaggtaaaacagtgtttgaatcaact
agcaaacgacctctggataaacggaaaagaaataagaatgacaacccagatgacatagag
gggtttttgggtccttggggcacctatgttgatgaaaagagagttatgaaacccaatgag
gaagagtctgcggaactagaagagatcttggctaaaagacaaaagaaaggaaaacagatt
gatgaaaggcctctggaagaaaagacagttctacacatcaaggaacctttcgactaccaa
ggccgttcatttatgcatcctcctcaggatgttggggtgaatctgaaatcagaagttccc
ccagatcgttgcttcttgcctaagaatcttattcatacatgggaaggccatacaaaagga
atatctgctatcagatggttacccaaaacagctcatttgctgctgtcttgtagtatggat
tgcagagtaaagatttgggaagtttacaatgatcgccgttgtgtcagaacttactatgga
catcgccaagctgtccgtgatattgcattcaacaacactggaacacatttcttgtctgct
gcttatgatagatatgtcaaattatgggatactgaaaccggagagtgtgtatctcgattc
accagccgaaaaaccccatactgctgtaaatttcatcctgatgaagataaacagcacctg
tttgttgccggaacgtcagacaagaaaatcatctgttgggatacacgttctggagaaatt
gttcaggaatatgatcggcacttgggctcagttaataccattacttttgttgatgaaaac
cgtcgcttcgttacgacttcagatgacaagagtttgagagtgtgggaatgggacattcct
gtggacatgaagtacattgcagaccccagcatgcactcaatgccagcagtaacactctcc
cctaattacaagtggttagcctgccagtccatggacaacaagattgttgttttctctgct
ctgaaccgattcaaaatgaataggaagaagactttctctggtcacatggttgcaggatat
gcttgctccattgacttttcacctgatatgagctatgtcatttctggagatgccgatggg
aaagtttatgtatgggattggaagacaaccaagcttttcaagaaatggaaagctcatgac
ggtgtttgtatttcaactttgtggcatcctcatgagccgagtaaggttgtctctgcaggc
tgggatggtgttctcaaattttgggattag

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