Thrips palmi (melon thrips): 117647054
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Entry
117647054 CDS
T08251
Name
(RefSeq) PMS1 protein homolog 1-like isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpal03400
]
117647054
DNA repair and recombination proteins [BR:
tpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117647054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
CHDNT
Motif
Other DBs
NCBI-GeneID:
117647054
NCBI-ProteinID:
XP_034244427
UniProt:
A0A6P8ZAW1
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MSLAQLPAATVKLITSSQIITSTSSAVKELFENALDAGATSVEVKLINFGLDRIEVKDNG
SGISKENTTCMALPHYTSKISNFTDLETLQTYGFRGEALNALCRVGQVTLTTATASDPMA
TVYTLDSSGNICGTKPSHHVQGTTVTVSNLFKNLPVRRQLMGSSRKSQEELKQVESVVKS
LAVIKPNVRVTLSHNKCLIWQKTQCSNLSNSFAQLVGYSTSQQMEMLSLKVNEEISVEML
VPKRNCDISMLAKSTPVFSFIFVNERPVLNKKLIKVLHQQLTVKFKDNFSPRKFAVCMFS
ISVIPSSVDVNLEPNKTKVLIKDEDVVLSEIEKQLQIYYSVPCPEKEIGPNEPVREKRED
LAHSPPLLDSDESGPTKKRKLEDEDTLDDLAVSAAHKTHQLPETNEALDSLIELMDSDND
FLVAESETKRVEPDEKTSQSCQPTGIIDDRPQKTHSNNSEFTFSSACSVTEASREKEKLV
DEDLRDPMEAEHCHINNDDADGAVSASNHFEQQKSKINSERIQAEQIPNANELGSLWEDV
STNDIDDMSVCLDALEFAPEASAADKCNRAVNGQGAGIVGTVEWSMGHVSLPKGDTMKGS
GVLIGKQPRNAADREEVDTGTYQVKQLDMSPTAASVEDHLDGPSMERHNKTTSLKLESPQ
KSPKAFLSPKSPSFVRSSDHLNKTSPGMDSSLQSVSSQMGRRELAAFTKFAREARPQIIL
ENPGIAFTHVATMLSDKWQSLSDTEKEHYEEIARKTATTKKIWKTADKQKKLEWVKKLPE
KQKIAKPSRPPRKETLNSISVDDIRDKVSKASLSIERGQQFYESKSGICLLGQLEPSGTW
VCLEKSVLSILNHSRLQEVVINHRLLSTYALPMIPLPSIQRLDPVILGEAAWKVLVSLPC
KFDELRQTRVISADIIAKNGFKIEMSGDNQHANLTEVAQALNYYGVKELKETLTLGSTWS
VVELFDCRPLRVANHIKSEAMRICRKSPTALSRTMVEELLEYWRTVMLPKDVNCLHAKPI
MAPLYNLVEKAKLCP
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttgcccaacttcctgctgctactgtgaaactgatcacaagttctcaaattata
acctccacctcaagcgctgtaaaagaactttttgaaaatgctctggatgcaggggctacc
tccgtcgaagtaaaattgataaattttggcttggaccgcatcgaggttaaggacaatgga
tctggaattagcaaagaaaacactacctgcatggcacttccacattacacctctaaaatt
tccaatttcactgatttagagacacttcaaacatatggatttcgaggtgaagctttgaat
gccttgtgtcgggttggacaagtcacactgacaactgctacagcttccgaccccatggct
acggtttatacattggattcgtctggaaacatttgtgggactaaaccatcacatcatgtt
caaggtactacagtgacagtgtcaaatctcttcaaaaacctgccagttcgacgccagcta
atgggttctagtcgcaaatcacaggaagaattaaaacaagttgagtctgttgtgaaatct
cttgcagtcatcaaacccaacgtccgtgttactctttctcataataaatgtctcatatgg
caaaagacacagtgctcaaatttatcaaattcttttgcccaacttgtgggctattcaaca
agtcaacagatggaaatgctgtccttaaaagtcaatgaagagatttctgttgaaatgctt
gttcccaaaaggaactgtgacatttctatgttagctaagtcaactcctgttttctctttc
atttttgtaaatgaaagacctgtgttaaacaaaaaacttatcaaggtcctccatcaacag
ctaacagttaaatttaaagacaatttctctcccaggaaatttgcagtctgtatgttttca
ataagtgtaattccatccagtgttgatgtcaacttggaaccaaacaagactaaagtttta
attaaagatgaggatgtagttttgagtgaaattgaaaagcagcttcaaatctactacagt
gttccatgtcctgaaaaagaaattggtccaaatgaacctgtgagagagaagagggaagat
cttgcccattcaccaccattattggattctgatgaaagtggtcctacaaagaaaaggaaa
ctggaagatgaagatactttggatgatctagcagtttcagctgcacataaaactcaccag
ttaccagaaactaatgaagcattggattcgctgatagagttaatggactcagacaatgac
tttctggtagctgaatctgaaacaaaaagagtggagcctgatgaaaaaacttctcagagt
tgtcagccgacaggcataatagatgatagacctcagaagacgcatagcaataacagtgaa
tttacattctccagtgcttgctctgtgacagaagcttctagagaaaaagaaaaacttgtc
gacgaagatttaagagaccccatggaagctgaacattgccacatcaacaatgatgatgct
gatggtgctgtttctgcctcaaatcattttgaacaacagaaatcaaaaattaactctgaa
agaattcaggctgagcaaattccaaatgcaaatgaactgggcagtttatgggaggatgtt
tccactaatgacattgatgacatgagtgtgtgtcttgatgccttagaatttgcgcctgag
gcctctgcagcagacaagtgcaatagggcagtgaatggacaaggagctggcatcgtcgga
acagtagagtggagcatggggcatgtgagtctacctaagggggacaccatgaagggctct
ggtgttctcattggaaaacaaccaagaaatgcagctgatagggaggaagtggacactggt
acataccaagtgaagcagttggatatgtctcccactgcggcatctgttgaagaccatctc
gatggcccttctatggaaagacacaacaaaaccacgtctctgaagcttgaaagcccacag
aaaagtcctaaggctttcctctcaccaaaaagtccaagttttgttaggtcttctgaccat
ctcaataagacttcaccggggatggatagttcacttcagagtgttagcagtcaaatggga
agaagagagttagctgctttcaccaaatttgcacgtgaagctcgtcctcaaatcatcctt
gaaaatcctggtattgcctttacacatgttgcaacaatgctgtcagataaatggcaatcc
ctttctgatacagaaaaagagcactatgaagaaattgcaagaaagacagctactacaaaa
aagatttggaagactgcagataaacagaagaaattggagtgggtgaaaaagcttccagaa
aaacagaagattgctaagccatcaaggcccccaaggaaagaaacactaaacagtataagt
gtagatgacatcagagacaaagtctctaaggcatccttgtcaattgagagaggtcaacaa
ttttatgaaagcaagtcaggtatttgtctgctcggacagcttgagccaagcggaacttgg
gtttgtttagaaaagtctgtgttgagtatcctgaaccatagtcgattgcaagaagtggtc
attaatcatcggctcttgagcacatatgctcttccaatgataccccttccctccattcag
cgtttggacccagtaattttgggtgaagcagcttggaaagtcctggtgtccctcccatgt
aaatttgacgagttaaggcaaaccagggttatttctgctgatattattgcgaaaaatggt
tttaaaattgagatgtccggagataatcaacatgccaacctaaccgaggtggctcaggca
ctgaattattatggtgtgaaagaactcaaagagacactaacacttggcagtacttggtct
gtagtagaattatttgattgtcgccccctccgtgtggccaaccacatcaagagtgaagca
atgagaatttgtcgtaaatctccaacagccctgagccgaacaatggttgaagaactttta
gagtactggagaactgtcatgctccctaaagatgtcaactgccttcacgccaaaccaatt
atggcccctttatacaaccttgttgaaaaggccaagttgtgtccgtaa
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