Thrips palmi (melon thrips): 117647246
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Entry
117647246 CDS
T08251
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03030
DNA replication
tpal03410
Base excision repair
tpal03420
Nucleotide excision repair
tpal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117647246
03410 Base excision repair
117647246
03420 Nucleotide excision repair
117647246
03430 Mismatch repair
117647246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpal03032
]
117647246
03400 DNA repair and recombination proteins [BR:
tpal03400
]
117647246
DNA replication proteins [BR:
tpal03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117647246
DNA repair and recombination proteins [BR:
tpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117647246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
AAA_22
Rad17
AAA_30
RuvB_N
AAA_14
nSTAND3
AAA_18
AAA_33
NTPase_1
RNA_helicase
AAA_5
Zeta_toxin
AAA_6
AAA_16
AAA_17
AAA_19
Motif
Other DBs
NCBI-GeneID:
117647246
NCBI-ProteinID:
XP_034244815
UniProt:
A0A6P8Z418
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MSKDIRSFFSVQSSKKGSSTSEVKKKDAQSSSSKKKRNVIESDSDEEVFEVKKKTKKSPS
PDKKKPKIEPKLVSAADIFGSSTVKRTARENSKKSSEFHNDPDFDKALQDLDESNWMDID
SNNAVKETSQLKAGKEASSSKAVKEASSSHGKADSSPKGPSKSPSKSPYFSKEKVVSKSS
EERNLNAFLGKPSTVTEDDNKSNVKKIKLEKDADYVSKASQKISDSSPIKIKKEKEDKEI
ALVVKKEIQEAGPSKVKIEKKSPETSKNQPKKVEIEIPEKDTKPRLEPSPPSYMWVDKYK
PSSIKNIIGQQGDNSNVKKLIRWLSSWHSNHGPGVNKKHNRPAPWAKDDSGAFFKAALLS
GPPGVGKTTTAHLVCKEVGMDVVEFNASDTRSQKLMSKEVSELLSSKSLLPFFQSGGDSK
TSERHVLVMDEVDGMAGNEDRGGVAELITLIKNSKCPVICMCNDRNHPKIRSLAGHCFDL
RFHKPRVEQIRGAMMSVCFKEKVKISPQALDEVIAGTNFDIRQILHNLSMWSSTEKVLNG
DQVKADANTAKKNIKLGPWDAVRKIFSSDDHKSMTIMDKSDLFFHDYNLLPLFVQENYLN
VAPHAAKKQTDTLRHIARAAASISYGDLIEKTIRSTNSWSLLPVQAIYSSVVPGDWMEGH
FKAQIQFPSWLGKNSRGGKMNRLIQELQLHMRLSISGGKEAVNLNYLEPILKAVIHPLVE
EGSQGVPKTLQAMQDYYITRDDLESLLELSRWPGRPDPMAPVDSKVKAALTRAYNKGGVM
TPYALDAPIKKKRATGGGEEGYEEEEGEEGSASESEDDAADAMIKAKKIEKKDKKDARGT
SASSSQASTSGRGSRGGARGGRGRGGGKNERIRLSQELSLLSSKWWSPASLSVNGYLKSG
AVIAFNLQLFLIREDQTCISF
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggatatccgttctttcttctccgtccaatcttccaagaaaggcagtagtacg
tcagaggtgaagaagaaggatgctcaatcaagcagcagcaagaagaagcgaaatgtcatc
gaatcagattctgatgaagaggtgttcgaagtcaagaagaagaccaagaaatctccttca
cctgacaagaagaaacctaaaattgaaccgaaactagtgagtgctgctgatatttttgga
tcaagcactgtgaaaagaacagctcgtgaaaactccaagaaaagctctgaatttcacaat
gacccagattttgacaaagccttacaagatttggatgaatcaaactggatggacattgac
tccaataatgcagtcaaagagacctctcaactgaaagcaggcaaagaggcatcttcatct
aaagcagtcaaagaagcatcctcatctcatgggaaagctgattcatctcctaaaggacca
tcaaagagtccctctaagagtccttacttttccaaagaaaaggtcgtttcaaaatcatct
gaggagagaaacttgaatgcctttctgggaaagccaagtacagttacagaagatgacaat
aagtccaatgttaaaaagattaaactcgaaaaagatgctgactatgtttcaaaagcaagt
cagaaaatttcagatagtagccccattaagatcaaaaaagaaaaggaagataaggagata
gctctggtcgttaaaaaggaaatacaagaagctgggccttctaaagtaaaaattgaaaag
aagtctcctgagacttctaaaaatcagcctaagaaagtggaaatagagattccagagaaa
gatacgaaaccaaggctagagccctctcctccatcttacatgtgggtagacaagtacaag
ccatcttcaatcaagaacataattggtcagcaaggagacaacagcaatgtgaagaaactc
attcgatggctctcttcatggcactcaaatcatggacctggagttaacaaaaagcataat
cgtccagctccatgggcgaaagatgattctggagcattcttcaaagctgccttgctgtca
ggtccccctggtgtaggaaaaacaacaactgcccatcttgtttgtaaagaagttggtatg
gatgtggtagaatttaatgcatcagacacacggtcacaaaaacttatgagtaaggaagtg
agtgaattgctatctagcaagtctttacttccgtttttccaaagtggtggagattccaaa
acatctgaaagacatgttctggtgatggacgaggttgatggaatggcgggtaatgaagat
agaggtggcgttgcggagctcataactctaatcaaaaactcaaaatgccctgtcatctgc
atgtgcaatgatcgtaatcatccaaaaatccgtagcctcgctggacactgttttgacctc
agatttcataaacctcgtgtagaacaaattaggggagcaatgatgtctgtgtgctttaag
gaaaaagttaagatatcaccccaagctttagatgaagtcattgctgggacaaactttgac
atccgtcagatactgcacaatctctccatgtggagcagtaccgaaaaagttctgaatggt
gatcaagtaaaggctgatgccaatactgcgaagaaaaacatcaaactgggaccatgggat
gctgtacgcaaaatattttctagtgatgaccataaatctatgaccataatggacaagtca
gatctatttttccacgattataatcttctgcccctatttgtacaagagaattacctcaat
gttgcacctcatgctgccaagaaacaaaccgataccttgcgtcatattgcaagggctgct
gcaagtatcagctatggagatttgatagaaaagactatccgaagcactaacagctggagc
ttattgccagttcaggctatctactctagtgtggttcctggtgattggatggaaggtcat
tttaaagctcaaattcaatttccctcttggctaggcaagaactcaagaggtggtaaaatg
aatcgtttgattcaagaattgcaactacacatgcggctaagtatttctggaggaaaagaa
gctgtaaatctgaactacctggagcctattttaaaggcagtaattcacccattagttgag
gaaggttctcagggagtacctaaaactcttcaagccatgcaagactattacattactagg
gatgacctggaaagcttattggagctgagccggtggcccggtcggcctgacccaatggct
ccagttgatagcaaggtaaaggctgctctaacaagggcatacaacaaaggtggagtcatg
actccttatgccctggatgctcccataaagaagaagagagccacaggaggaggggaagaa
gggtatgaagaagaggagggggaggagggtagtgcaagtgaatctgaggatgatgcagct
gatgctatgattaaggccaagaagatagagaaaaaagataagaaagatgcacgagggacc
agtgcgtcatcaagtcaagcctcaacctcgggtcgaggatcccgaggaggtgcaagaggc
ggcaggggcaggggagggggaaaaaatgagagaatcagactgtcacaagagttgtctctt
ttgtcgtcaaaatggtggtctcctgcatccttaagtgtcaatggttatctcaaatcaggt
gctgtgatagcatttaatttacagttatttttaatcagagaagatcaaacttgcatctca
ttttaa
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