Thrips palmi (melon thrips): 117647516
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Entry
117647516 CDS
T08251
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpal04121
]
117647516
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
117647516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
117647516
NCBI-ProteinID:
XP_034245171
UniProt:
A0A6P8Z5Q2
LinkDB
All DBs
Position
Unknown
AA seq
2233 aa
AA seq
DB search
MVEWEEGDRMSFYDSDRFEEDSMCSWSTEPESLCNNWRGWKKQSNQQTTVSHYNSSKKFY
EDGVPSLSELCARTVAAHIPFELVEHVYPPVPEQLQLRIAYWSFPDNEEDIRLYSCLANG
SADEFLRGEALFQKRAIKSPLQIGFHLSASVAPPAAVNPLDATYNVAVTFDRRRITSCNC
TCTSTAYWCSHVVAVCLYRIHLPMHVCLRAPVSESLSRLHRDQLQKFAQYLISELPQQIL
PTAQRLLDQLLSTQQTAINSVCGAPDPTAGASVNDLTSWYLDEKTLHDNIKKILVKFCVP
APIVFSDVNYLSTTAPPAAAEWSSLLRPLRGREPEGMWNLLSIVREMFKRNDRNAIPLLE
IITEEVLACEQILLWWFNTKVAMHSGASGHGGGKHGSVNSNSQASQHACSSLCDEIVVLW
RLAALNPGLGPDERELLRVQFHDWHVNIVQKVTKARGMTSATTGVQFNNNQNNATPPSTI
SNSKTNAFRSDLEVFPGFRPALEASFLDWDDYPIPGITYQHGVSELYHCPFTCFRHAGEA
SRSDNVVNQVNSSQAVLNCQLPNTHHPHHFHHHNPHLQHNSGSSSKTQRVARTTPYATEF
PSFIGKCPFNIPFGGSLARADGNRSSVSSEGFCENDNEGELLPIPINLPMVLATGRGSNS
SSSSGNNSSSSSNSGDRNHLRTGARPKEFPPSSAGEASGWSKDVKDIEIDNINCFGFDEV
EHAFLEASRAGSCFPKEAKQSSSLDVEDEEDVGLFDVACSSRCTDSKEKKPSSKSPSEAS
HSKSIKENEQAATAPDAAETSTISNDSGAGEEGACGPAPSSSAEAESERRPSKDDSVSSS
TSDSYHLSGDDYTVYYYDPKASGGTDAEKTATQETDSEKKEEKPSSSIDKLLENVKKETD
PWENLFARAEGLHAHGHSKDACHLAVQLAEELLDNPPELMIDVPPLISRGKRKKQVNPAS
HQLSCLATATLSKCAFLCQVLAENRDHFHLAFRVGLFGLLMARPPASTKPLEVKLANQEI
ELVGLLKKIPLGTAEVSIIRDHAQMLKDGTLKSRGEALLPTMLASFIFEVLVSPNGSNGF
TVRDFKGQLMPNSTLRWTSDERLGFEAAVAAMGLKANVSEADHPLLCEGTRRQRGDLAIA
LLSHYKDDPEKVARIMDKLLDRDVHQLIKTPLLPCYYTSNPPTRSLNRSRRDEARQREAA
QNAQVSTSTNAATGSGSNSASPGPAPSTPSAPTSGAAEAGLVPDGSLAGSRPHSSTSAEL
DQGLSVLSLNSHQTPTAPTGSAAPASSVPTATTSTATASTSRPKESTRYKNKRTYPSLPN
QPSESGAHFMFELAKTVLVKAGGNSSTSLFTQASTSTGNHHGPHRALHMCAFQIGLYALG
LHNCVSPNWLSRTYSSHVSWITGQAMEIGAPAISFLIDTWEGHLTPPEAVSIADRASRGC
DPNIVSAAAELALSCLPHSHALNPNEIQRAILQCKEQSDQMLEQSCLTVETAAKGGGVYP
EVLFQVARYWYELFMKHCSGSELPIEFDIPEPVFTMEANNMMVLDPGPAAGGMGGVGVAN
SLANNMANSMASIANAMMPPQSMPVNMMSVPFGMSPYGFAMPGSMAGSMAASHHPMQPMQ
PMQSMQNVNAFSVPQRMPPPPSYPMYLPNCPNQYQYPPSSGAHPSTYNAMPHSQQAMPFY
PNMSMRQGMAQGMAQGMAQGMAQSAGPTPVLTHTVFELRAPGNPQQGQGLQGQGLQGQMQ
GQGLQGQGLQGQGLQGQGLQGQGLQGQGLQGQMQGQQPMPQSQPQMGQQMNLPPSLRQIQ
LPMRNVQQMPMAAFQTLSMQQGMPQGMQPGMPQGMPQGMQQGMQQGMHQDMQMPVQQVQQ
QQSAPSCQDGGACAQLGQGGQGGAENMSISQEGPEYCELSTGSGLGQGQGQGQGQGQSQG
QCQVLSDENSELARLFDVVHPRERQFFLVPDIALEGHDLPALACIPPNPPQISVVEPSEL
AKSEIPEIRRLALRGEPMIQVVQTKGPFVVAVPVAPVNSPAQAMMPNVPPVNPLALVAPQ
CQVHRHQQGYTNTQLRYLLAAYRVGMLALETLARRVHDDRPQAKYARNPPYGEDVKWLLR
VSKKLGNQYLHQFCVCAVSSIVSPFVLHDVALEAAQFLARVNPSMAMQHLRSALTPLVSK
CQQMYIQCLHQKLYHLTTGDYEDFVSIVCSARAAFQITPEGAQQFKEWLQSIKRSKSCKK
DLWAQINAALQAK
NT seq
6702 nt
NT seq
+upstream
nt +downstream
nt
atggtggagtgggaagagggggaccgaatgtccttctatgactcggaccgctttgaggag
gactcgatgtgcagttggagcaccgagcccgagtctctgtgcaacaactggcggggctgg
aagaagcagtccaaccagcagacgaccgtgagccactacaacagctccaagaagttctac
gaggatggagtcccttcattgtctgagctgtgtgcaagaacggttgctgctcacatcccg
ttcgaattggtggagcatgtttaccctccagtaccagagcagctccaactgcgaattgcg
tactggagctttccagacaatgaagaagatatcagactctactcatgtcttgccaatgga
agtgcggatgaattcttgaggggtgaggcactgtttcagaaacgtgctattaagagccct
ttgcaaataggcttccatttaagtgcaagtgtagctccacctgccgcagtcaacccgtta
gatgcaacttataatgtagctgtaacgtttgatagaagaagaataacgtcatgtaattgt
acgtgcacatcaactgcctattggtgttcccatgttgtagctgtttgtttgtaccgtatt
cacttgccaatgcacgtttgtctacgagccccagttagtgaatcgctttcccgtctccat
agagatcaacttcaaaagtttgcccaatatctcattagtgagttgccgcaacaaattcta
ccaactgctcaacggcttcttgatcagctcctctccactcaacaaactgctatcaattca
gtttgtggagctcctgatccgactgcaggagcatcagtgaatgacttaacatcttggtat
cttgatgaaaagactctccatgataatattaagaaaatccttgtcaaattctgtgtccca
gctcctatcgtattcagtgatgtcaactatttaagcaccactgcacccccagctgctgca
gaatggagttctctgttaagaccactcagagggcgagagcctgaaggaatgtggaattta
ctgtcgattgtgcgggaaatgtttaagaggaatgatcgtaatgctattcctctgttggaa
atcatcactgaagaagttttagcttgtgaacagatcctgctgtggtggttcaacaccaaa
gtggccatgcacagtggtgcctctggtcatggaggaggcaagcacggcagtgtaaatagc
aacagccaagccagccagcatgcatgctcttctctgtgtgatgaaattgtcgttctgtgg
agattagctgccttaaatcccggcttgggcccggatgagagagaattgctgcgagtgcag
tttcatgactggcatgtaaatattgtacagaaagtaaccaaagctagaggaatgacctcg
gctaccactggagtccagttcaacaataaccagaacaatgcaactccaccttcaacaata
tccaattctaaaactaatgccttccgttccgacctcgaagttttccctggtttccgacca
gcgttagaagcaagtttcttagactgggatgactatcctattcctgggataacctaccaa
catggagttagcgaactgtatcattgtccattcacttgcttccgacacgctggagaagct
agcagatctgacaatgttgtgaaccaggtcaactcttctcaagctgtgttaaactgccag
ctaccaaacacacatcatccacatcatttccaccatcataatcctcatcttcaacacaat
agcggctccagttccaaaacacaacgagtagcaaggacaactccttacgcaactgaattt
ccttcatttattggcaagtgcccgtttaatattccctttggaggctctctggcacgtgct
gatggcaacaggagcagtgtcagcagcgaaggcttttgtgaaaacgataatgaaggggaa
cttcttcctatacccatcaacttgcctatggtgttagccactggtagagggagtaattct
tcttcaagcagtggaaataatagcagtagttcaagcaacagtggtgacagaaatcattta
agaacgggtgctcgtcccaaggagttccctcccagtagtgctggagaagcctctggttgg
agcaaagatgtcaaggacattgaaatagacaatatcaattgcttcgggtttgacgaggtg
gagcatgcgttccttgaagcttcgagagcaggcagttgcttcccaaaggaggcgaaacaa
agttccagtcttgatgtcgaagacgaagaggatgtgggtctgtttgacgtagcttgctca
tcaagatgcacagattcgaaggaaaagaaaccttcgagtaaaagcccatctgaggcttca
catagcaagtccatcaaagaaaatgaacaggctgctactgccccagatgcagctgaaacc
tccactataagcaatgattctggagcaggagaagaaggtgcctgtgggcctgcaccttca
agcagtgcagaggcagagtcggagaggagaccctccaaggatgactcggtgtcttcctca
acgtcagattcttaccacttatctggtgatgattacacagtgtattactatgacccaaaa
gcctctggtggtaccgatgctgaaaagactgcaactcaagaaactgatagtgaaaagaag
gaagagaaaccaagttcctcaatagataaattacttgaaaatgttaagaaagaaacagat
ccatgggagaatttgtttgcaagggcggagggtttgcatgcacatgggcacagcaaggat
gcatgccatcttgcagtgcagcttgccgaggaactgctggacaatcctcctgaattgatg
attgatgtgccacctttgatcagtcggggcaaaaggaagaagcaggtgaatccagcatct
catcaattgagctgcttggcaaccgctacactctcaaaatgtgctttcttgtgtcaagtc
ctggctgaaaatagagaccacttccacttggcattcagagtgggcctttttggactccta
atggccagacctccagcgagcaccaaaccattggaggttaaattagccaaccaggaaatt
gagcttgttgggcttttaaagaagattcctttagggactgcggaggtctctatcattaga
gatcatgctcaaatgctcaaagatggaaccttaaagagtagaggagaagcattacttcct
accatgttggcatcatttatatttgaagttcttgtgtcgcccaatggcagcaatggattt
acagtacgggatttcaaaggccaactcatgcctaactcaaccctcaggtggacctccgac
gagcgcttgggctttgaggctgcagttgctgctatgggccttaaagccaatgtttctgaa
gctgaccatcctctcctctgtgaaggcactaggaggcaacgtggtgaccttgctattgcc
ttactctctcattacaaggatgacccagaaaaggttgctcgaatcatggacaaacttctt
gatagagatgtgcaccagttaataaagacacctctcttgccttgctactacaccagtaat
cctccaacaaggagcttgaaccgctcacgtagggacgaagctagacagagagaggcagcg
cagaatgcccaagtgtcgacttcaacaaatgcagcaacgggaagtggatccaactctgct
tccccagggccagcaccgtccacccctagtgccccaacatcaggagcagcagaagcaggc
cttgttcctgatggctctttggccggcagccgtcctcatagttctactagtgccgaattg
gaccaaggactgtctgtattgagcctgaatagtcatcaaacaccaactgcaccaacggga
tcagctgcaccagcttcctctgtacccactgcaaccacttccactgccactgcttcgact
tccagacctaaggagtcaaccagatataagaataagagaacctacccctccttgccaaac
caaccatcggaatcaggtgctcacttcatgttcgaactggctaaaactgtccttgtgaaa
gctggtggaaatagcagtacctcgctgttcactcaagccagcacaagtacaggcaatcat
catggtcctcaccgtgccctgcacatgtgtgcattccaaattgggctgtatgccttggga
cttcataattgtgtctctccaaattggcttagcagaacttattcttctcatgtatcatgg
atcactgggcaagccatggaaatcggcgctccagccatttcgttcttgattgacacttgg
gaaggccatcttacaccgccagaagctgtgagcattgcggacagggcgtccagaggttgc
gaccctaacattgtttcagctgcagccgaattggcactgtcatgcctgccacactctcat
gctctgaatccaaatgaaattcagcgagccatacttcagtgtaaggaacagagtgaccaa
atgttagaacagtcctgcctcactgttgagactgctgctaaaggtggtggagtttatcca
gaggtactcttccaagtagcccgatactggtatgagctattcatgaagcactgctctggc
agcgaactgcccatcgagttcgacattccggagcccgtcttcacgatggaggccaacaac
atgatggtgctggacccgggccccgcggccggcggcatgggtggcgtcggcgttgccaac
agcctggccaacaacatggccaacagcatggctagcatcgccaacgccatgatgcccccg
cagagcatgcccgtcaacatgatgtcggtgcccttcggcatgtcgccctacggcttcgcc
atgccgggcagcatggctggcagcatggcggccagccaccaccccatgcagcccatgcag
ccgatgcagtccatgcagaacgtgaacgccttcagtgtgccgcagcgcatgccgccgccg
ccgtcctacccaatgtacctccccaactgccccaaccagtaccagtacccgcccagctcc
ggcgcgcacccctcgacgtacaacgccatgccgcactcgcagcaggccatgccgttctac
cccaacatgagcatgaggcagggcatggcccagggcatggcccagggcatggcgcagggc
atggcgcagagcgcggggcccacgcccgtcctcacgcacaccgtgttcgagctgcgcgcc
cccggcaacccgcagcagggccagggcctgcaggggcagggcctccaggggcagatgcag
ggccagggcctccagggccagggcctccagggccagggcctccagggccagggcctccag
ggccagggtctccagggccagggcctccaaggccagatgcagggccagcagccgatgccc
cagtcgcagcctcagatgggtcagcaaatgaaccttccgccaagcttacgtcagatccag
ctccccatgcgtaatgtgcagcaaatgcccatggctgcgttccagacgttgtccatgcaa
caagggatgccacagggcatgcagcctgggatgcctcaaggaatgccccaaggcatgcag
cagggcatgcagcaaggaatgcaccaggacatgcaaatgccggtccagcaagtacagcag
cagcagtctgccccgtcgtgtcaagatgggggggcatgcgcccagctcggccaaggcggc
caaggcggcgcggagaacatgagcatatcccaggaggggccggagtactgtgagctttcg
accgggtctgggctgggccagggacaaggccagggacagggccagggacagagccaggga
cagtgccaggtcttgagtgacgagaactcggagctggctcgtctgttcgacgtggtccat
ccgcgcgagcgccagttcttcctggtgccggacattgctctggaggggcacgaccttccc
gcgctggcgtgcatcccgcccaacccgccccagatctcggtggtcgagcccagcgaactg
gccaagtctgagatccccgagatccgccggctggccctgcgcggcgagccgatgatccag
gtggtccagacgaaaggcccgttcgtggtggccgtgccagtggccccggtcaactcgccc
gctcaggccatgatgcccaacgtccctccggttaaccctctggcgttggtcgcgccacag
tgtcaggtgcacaggcatcagcaagggtacactaacacacagctgcgttatttgctggct
gcttaccgagtgggaatgcttgctctggagacccttgctcggagagtgcatgatgaccgc
ccccaggcgaaatacgctcgcaaccccccttacggcgaggatgtcaagtggctcctcaga
gtatcgaagaagcttggcaatcagtacttgcatcagttttgtgtgtgcgctgtaagcagc
atagtgtcaccttttgtgctccatgatgttgcattggaagcggctcagttccttgcacgg
gtgaatcccagtatggctatgcagcatttacgttcagctcttactcctctggtttcaaag
tgtcagcaaatgtatattcaatgccttcatcaaaaattgtatcatttaacaactggtgat
tatgaagattttgtgagcattgtttgctctgcccgagcagcattccaaataactccagag
ggtgctcaacagttcaaagaatggcttcagtctattaagagatctaaatcgtgcaagaaa
gatttgtgggcacagatcaatgcagctcttcaggcaaaatga
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integrated database retrieval system
