Thrips palmi (melon thrips): 117647545
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Entry
117647545 CDS
T08251
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117647545
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117647545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
RuvA_C
Motif
Other DBs
NCBI-GeneID:
117647545
NCBI-ProteinID:
XP_034245228
UniProt:
A0A6P8YYJ0
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MEETSRSHSYVCVKVEHVGVIREKLKEIREKFRVSLHEVPAPQAKPDCGTDADSAGLSVL
FFTVEKSGDASQIEVSQTANRVQCFVDSLCSGLGDHGDDSSYDSDAEAEGEAEAEGDDVR
HQDVSRTTSETLAAEYADYITQQGDAAVSRLEFGIRLGYTEPLVRAALRRLGPNPAQNEL
LAELIRQAQSAQPNAQQPAQHAPSAQHPQHAQHPRRQAGVGAAAAGACAATAADDDAALQ
PRPRLRPIVIDGSNVAMGHGNKEVFSCRGLRLCVDWFRARGHTDITVFVPKWRKEAPRPD
NLITEQAILGELERERLLVYTPSRLVGGKRVVCYDDRYVLRLAADTGGVVVSNDNYRDLA
QENAEFRRVVEQRILMFSFVNDRFMPPEDPLGRSGPSLDQFLRLPAARTDAPPPCPYAKK
CTYGNKCKFSHPERGLLPHKSVTERLAEQAQKHLVAAGLARTGPGKLLKGKSLSLPLDSD
VQPVVRKNPLTRSHSTVPGTGMTGMMPTAASALGAPPSDAAVNAANLHRPLQRQLSLNPT
YDARLAQMRKAMGMPPMQLQPPLQPQMQPPSAAAPVEALPVHAGVSRIASAPESYRTWAQ
QQRRLGGAGGSDPQLQMQLQQSPAWNQALYHHQAQQARHRMHYHLASIFPEELVATAMSL
YPDEVDAQKICAAILSLQTEPKR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacttcaagaagtcactcgtatgtctgtgtgaaagttgagcacgttggtgtc
atccgcgagaaattaaaagagatccgcgaaaagttccgtgtgagtctccacgaagtgcct
gccccccaggcaaaaccagattgtggtacggatgcggattcggcgggcttgagtgtcctg
ttctttaccgtggagaaaagcggggatgcatcccagatcgaagtatctcagacggcgaat
cgagtccagtgcttcgtggactcgctgtgctccgggctgggagaccatggcgacgactcg
agctacgacagcgacgccgaggccgagggggaggcggaggccgagggggacgacgtgagg
caccaggatgtgagccgcaccacctccgagaccctcgccgccgagtacgccgactacatc
actcagcagggggacgcggcggtgtcgcggctcgagttcggcatcaggctgggctacacg
gagccgctggtgcgcgcggcgctgcggcgcctggggcccaaccccgcgcagaatgagctg
ctggccgagctgatccggcaggcgcagtccgcgcagcccaacgcgcagcagcccgcccag
cacgccccgagcgcgcagcacccgcagcacgcgcagcacccccgcaggcaggccggcgtc
ggggcggcggcggccggcgcctgcgcggccacggcggccgacgacgacgccgcgctgcag
ccgcggccgcgactccggcccatcgtcatcgatggcagcaacgtggccatggggcacggc
aacaaggaggtgttctcgtgccgggggctgcgcctgtgcgtggactggttccgcgcgcgg
ggccacaccgacatcaccgtgttcgtgcccaagtggcgcaaggaggcgccgcgccccgac
aacctgatcacggagcaggccatcctgggcgagctggagcgcgagcggctgctggtgtac
acgccgtcgcgcctggtgggcggcaagcgcgtcgtctgctacgacgaccgctacgtgctg
cggctggccgccgacacgggcggcgtcgtcgtcagcaacgacaactaccgggacctggcg
caggagaacgccgagttccggcgcgtcgtggagcagcgcatcctcatgttctcgttcgtc
aacgacaggttcatgcccccggaagacccgctgggacggtcggggccgtcactggaccag
tttctccgtctgcccgccgcccgcaccgacgcgccgccgccctgcccctacgccaagaag
tgcacctacggcaacaagtgcaagttcagccacccggagcgcggcctgctgccgcacaag
tccgtcaccgagaggctggccgagcaggcccagaagcacctggtggccgcggggctggcg
cgcacggggccaggcaagctgctcaaggggaagtccctgagcctgccgctggactcggac
gtgcagcccgtggtgcggaagaacccgttgacgcggtcgcactccaccgtgccggggacg
ggcatgacgggcatgatgccgaccgcggcgtcggccctgggcgcgccccccagcgacgcg
gcggtcaacgcggccaacctgcaccggccgctgcagcgccagctcagcctcaacccgacc
tacgacgcgcggctggcgcagatgcgcaaggccatgggcatgccgccgatgcagctgcag
cctccattgcagccgcagatgcagccgcccagcgcggccgcccccgtcgaggccctcccc
gtgcacgccggcgtctcgcggatcgcctcggcgcccgagtcgtaccggacctgggcgcag
cagcagcgcaggctgggcggcgcgggcggcagcgacccgcaactgcagatgcagctgcag
cagagccccgcctggaaccaggcgctgtaccaccaccaggcccagcaggcgcgccaccgc
atgcactaccacctggcctccatcttccccgaggagctggtcgccaccgccatgagcctc
taccccgacgaggtggacgcccagaagatctgcgccgccatcctgagcctgcagaccgag
cccaagcgttga
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