Thrips palmi (melon thrips): 117647628
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Entry
117647628 CDS
T08251
Name
(RefSeq) nucleolar protein 6 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117647628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpal03009
]
117647628
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117647628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap_D2
Nrap
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
117647628
NCBI-ProteinID:
XP_034245387
UniProt:
A0A6P8ZBN0
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MSVSVSHLRCVFVNFELILFAVEPKFLKQKPVKKNVQYESDESLGADESEDLQFAFNLGG
TPVENDVDDDYIDDDDDEHDGSSEEDGDDVLETLENNFENKDTRKRKNSENVDGSDATSL
KKRKKSKTADLQKPPTAQEVARLRETENLFHSSLFRLQIEEMIGEISIKKKRISSFIEWF
SSLKQCLSKIKSGEVLELMDQDWLENLGVSIPVVQEPFSLKGSFNFIPPSSISIVGSHAI
GCSLGPHLNVDIAIEMPSKCFQGSDHINHRYHRKRALYLCQVIAHLKASGIISSKEDFVP
RFELPRASNPLIPVVVVVPTGALQGRAQVHLHITVPEETFKLSKLNPSKNSVRSKWLFNE
KTVSEGKDYATPIHNASILADLVAKQNETLKLETLEDFKNIKDGIILLKVWLRQRELDQG
YSAFGSYLMTMLVVYLLRSRRLSSHMSSYQVARTVWNFLKESDWTSDGGGLTLCDKTTGG
APSLSEFHEHYEVVFVDYTGYCNLAAHLDAISFKRIKLESAMAVQYLDNPSVNSFQALFM
KTAPFYRRFDHILCFTNISSLEEMNKKFASKKEKLDKGHHSIGLAAYLLLKVLQKGLGKR
VSEWGIHIPQKVSWQIADQPTPSQGPLLIGINLDSEHAYSVLDKGPPADMPQAEEFRKFW
GDKSELRRFQDGSISEAVVWLSEKDITLSQRRVINRQITEYLLKTKLGLDTSKCLVYLAD
QLEETLALTKCKPATFSYGTGEEATLAVLSALDKLAAQLRGLSDLPLDISGVQGSSPVCR
YTDVFPPLSTDSHCRPGRFITKAKENCNVLAAKAHYSHAPDYVSPVEVVLQLALSGKWPD
DAQAVRRVRTAFAIQIAESLRTQCGLTTQAFPNYVDVVKDGFVFRLRVAYQREPALLRQF
VMPDGMVKIVDNKEAQILEREINYLPKITSFLHGLHQQQPAFGPAACLAKRWISSHMIRW
SHFPEDAIELLVAHLFLCPEPFSPPAQPQIAFLRFLHLLSSTNWHLEPIILNFNNDMNRE
IVQEIEHRFTSERAQLPALFIATPSEHLNSSWTKEAPSLTILARVALLAAESLKVLQSCY
LTESHLETNMWKQIFRPSLDCYNIIIHLNPSMISRNSQWIDAKVSEKIFALNPYKKGDNE
KIPVVGYDAVQCYLQDLEEAYSDFAMFFHDLYGGNVIGVVWKPPAMEPKDFKISHMNGRK
LEVNPTQLTLNKEALVEDFYILGKGLVKSIDVKDSSV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtttcagtttcccatttacgttgtgtttttgtaaactttgaattaattttattt
gctgttgaaccaaaatttttgaaacagaagcctgtaaagaaaaatgttcaatacgaaagc
gatgagtccttaggtgctgacgagagtgaagatcttcagtttgctttcaacttgggagga
acccctgtggaaaacgatgttgatgatgactatattgatgacgatgacgatgaacatgac
ggctcttcagaggaagacggtgatgatgtgttggagactttagaaaataattttgaaaat
aaagatacccgcaagcgaaaaaattccgagaatgtggatggatctgatgcaacttcgtta
aaaaagagaaaaaagagtaaaacagctgatttgcagaaaccccctacagctcaagaagta
gctcgtttacgtgagactgaaaatctctttcactcaagtctgtttcgtcttcaaattgaa
gagatgattggtgaaataagtatcaagaaaaagcgaatttcatccttcattgaatggttt
tcttccttaaaacagtgtctttcaaaaattaaatcaggagaggtgttagagctaatggat
caagactggcttgaaaatttgggtgtatcaattcctgtagttcaagaaccattctctttg
aaaggatccttcaatttcatccctccatcatccatatccattgttggctcccatgccatt
ggttgtagccttggccctcacttaaatgtggatattgctattgaaatgccttcaaaatgt
tttcaaggcagtgatcacataaatcataggtatcaccgcaaacgcgctctttacctttgc
caagtgattgctcaccttaaagcaagtggcataatatccagcaaagaggactttgttcct
cgttttgaattgccacgagcatctaatcctcttatacctgttgttgttgttgtgccaact
ggcgcattgcaagggcgagcacaggtacatttgcacataacagtcccagaggagacattc
aaactttccaaactaaatccatccaaaaattctgtgcggtcaaagtggctttttaatgag
aagactgtgagcgaaggaaaagactatgccacacctattcacaacgcaagtattctagct
gatcttgttgcaaaacaaaatgagactttaaagcttgaaacactggaagatttcaaaaac
atcaaagatgggataatacttctcaaagtttggctcaggcaaagggagcttgatcaagga
tattcggcatttggtagttacctgatgaccatgctggtggtttacttgctgcgcagtcgg
aggctctcctctcacatgagcagctatcaagttgctcgtactgtatggaattttttaaag
gagagtgattggacttctgatggaggtggcttgactctatgtgacaaaactactggaggt
gcaccatctctttcagagttccatgagcattatgaagttgtctttgttgattatactggt
tattgcaatcttgccgctcatcttgatgcaatatcttttaaaagaatcaaattagagagt
gcaatggctgtacagtaccttgacaatccatcagttaacagttttcaagctctttttatg
aaaactgcacctttctacagacgttttgatcacattttatgctttacaaacatttcttct
cttgaagaaatgaacaagaagtttgcatcaaaaaaagaaaagcttgacaaaggacatcat
tcaattggattagctgcttatcttttattgaaagttctgcaaaagggcttggggaaaaga
gtatctgaatggggaatccatatcccccaaaaagtatcatggcaaattgcagatcaacca
acaccctcccagggtcctctgttaattgggattaatctggattcagagcatgcctatagt
gttttggacaaaggtccacctgcagatatgcctcaggctgaagaattccggaagttttgg
ggtgataagtcagagttgcggagattccaggatggaagtatttcggaagctgttgtttgg
ctttcagaaaaagatataactctatctcaaagaagagtgatcaatcgccaaatcactgaa
tatcttcttaaaacaaaattaggtttggatacatctaagtgccttgtttatttagcagac
caattggaagaaactttagccttgaccaagtgcaagcctgccacattttcatatggcact
ggtgaggaggcaacactggcggtactttcagctttggacaaactagctgctcagcttcgg
ggcttgtctgacctacccttggatattagcggagttcagggatcatctccagtatgccgt
tatacagatgtattcccaccactctccactgatagccattgtaggcctggaagatttata
acaaaggccaaagaaaattgcaatgttttggctgcaaaagctcattattctcatgcacct
gattatgtttctccagttgaagtggttctgcagctagctttgagtgggaaatggcctgat
gatgcacaggctgtgcgtcgagttcgcacagcatttgctatccagatagccgagagctta
aggactcaatgtggccttactacacaagctttcccaaattatgtggatgtggtcaaggat
ggatttgttttcagactgagagtggcctatcagcgagagcctgccctattacggcagttt
gtcatgcccgatggtatggtcaaaatagtagataacaaggaggcacaaattttagaaaga
gagatcaactacttacctaaaataacaagttttttacacggcttgcatcaacagcaacct
gcatttggcccagctgcatgccttgctaagagatggatttcatctcacatgatacgatgg
agccactttccagaagatgctattgaacttttggtggcccatttgtttctctgtccagaa
ccgttttcacccccagcacagcctcagattgcatttttgagattccttcatttattgtca
tcaactaattggcatttagaaccaataattttgaacttcaacaatgatatgaacagagaa
attgtacaagaaatcgagcatagattcacttcagagcgtgctcaactgccagctcttttc
atagcaaccccctctgaacatcttaattcatcatggaccaaagaagctcccagccttaca
attttggctcgagttgctctcctggcggcagagtccttgaaagtattgcaatcatgttac
ttgactgaaagccatttagaaaccaacatgtggaagcaaatatttagaccatcattggac
tgttacaatataatcattcatttgaatcccagtatgatttctcgcaactcccaatggatt
gatgcgaaggtatctgaaaaaatttttgctctgaatccttataagaaaggtgacaatgag
aaaataccagttgttggatatgatgctgttcaatgttacctacaggatctggaggaggca
tatagtgactttgccatgtttttccatgatctttatggtggcaatgttattggggttgtg
tggaaaccacctgcaatggagcccaaagacttcaagataagccacatgaatggacggaaa
cttgaggtcaatcctactcaacttactctgaacaaggaagctcttgtggaagacttttac
atattagggaaaggacttgtcaaaagtattgatgttaaggatagctcagtttaa
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integrated database retrieval system
