Thrips palmi (melon thrips): 117648095
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Entry
117648095 CDS
T08251
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04137
Mitophagy - animal
tpal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117648095
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117648095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpal04121
]
117648095
Enzymes [BR:
tpal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
117648095
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117648095
Multi subunit type E3
ERAD complex
117648095
LMBR1L-GP78-UBAC2 complex
117648095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
G2BR
CUE
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
Prok-RING_4
zf-RING_16
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
117648095
NCBI-ProteinID:
XP_034246196
UniProt:
A0A6P8Z7S9
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MPVILVDRLPLPSLKTYTVISVALLSCSVYYAVQVTSEANWKTNATVSQGALVAASMGKA
EEPSFPSALPEAAPEVVQSQLPPLSKTKPPLSTQIAEVITYMVQEPLCIWTLMNMAYCCL
ILLGKLIQRVVFGQLRVSEQQHVKDKFWNFVFYKFIFVFGVINVQYLDEVVLWVAWFSVL
GFLHLLAQLCKDRFEYLSFSPTTPGWSHARLVGLLFAILLLSGFMFLICIAVGFFDGVNT
FAFMAAECVLLTVRTLHVILRYILHLYDMRGSDGGNGGGHEGLARVVTWEKRGPVAYYAE
FVLELAALVVDLLHHLHMLLWSNIFLSMASLVICMQLRFLTHEIQRRFKKHRNYLWVLNH
LEQNYPMASAEELAQNSDNCAICWEKMETARKLPCAHLFHNSCLQSWLEQDTSCPTCRLA
LSMQSPITRDHNHLDHTLLAVDGGADGVQATRRPPANHFFHFDGSRYVSWLPSFSVEVTH
TQLLRADQGPPVQTSQLDAMARQVQQLFPHMPMPVIMDDLRLTRSVEITIENILDGRLVA
PPGRRFREEIPGPTLVTTVPPQLQLTPPSHTTPPDSSEDSVDSTSQDSTVKEEVPSNLGG
RFSKSPTERERILHLRKEQLVQAARRRYLDRQSSQPSLETAAVADPVPDEVLLQNI
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaatccttgttgataggctgcctttgcctagtttgaagacatacactgtgata
agtgttgcattgctatcatgctcagtctactacgctgtacaagttaccagcgaagcgaat
tggaagacaaacgccaccgtatcgcaaggagcgttagtggcagcgtccatgggaaaggca
gaggaaccatcgtttccatctgcgctaccagaagctgcacctgaagtggttcaatcacag
ctgccacctctctcaaagacgaagcctcctcttagcacccagattgcagaagtcatcacc
tacatggtgcaggagccgttatgtatatggaccctgatgaacatggcgtactgctgcctc
atcctgcttggcaagctcatccaacgagttgtctttggccagcttcgagtctctgagcag
caacatgtcaaggataaattttggaactttgtgttctacaaatttatctttgtctttgga
gtcattaatgtgcagtacctggatgaagttgtgctctgggttgcttggttctcagttctg
ggctttttgcatttacttgcacagttatgcaaagatcgttttgaatatctgtctttctcc
ccaacaacccctggctggagtcatgcaaggcttgttgggctcttgtttgcgattctgctt
ttgtcgggatttatgttcctcatttgcatagccgttggtttctttgatggagtgaacacg
tttgcatttatggctgctgagtgcgtccttttaacagtacggactcttcatgtaattctg
cgatacatcctgcatttgtatgatatgcgagggagtgatggaggaaatggaggaggtcac
gaaggcctggcccgtgtggtgacttgggagaaaagaggtccagttgcatactacgccgag
tttgttttagaactggcagcgttggttgtagacctccttcatcaccttcatatgttattg
tggtctaacatattcctctctatggcctcccttgtaatatgcatgcaattacgattctta
actcatgagattcaacgccgtttcaagaaacaccgtaattacctctgggtcctgaatcac
ctagaacagaactatccaatggcctcagctgaggagttggcccaaaactccgataactgt
gccatatgttgggagaaaatggaaacggcaaggaaactcccatgtgctcatctattccac
aattcttgcttgcaatcatggctggagcaggatacttcttgcccaacttgtcgtcttgca
ctttccatgcagagtcccataactcgtgaccataatcatttggatcacactcttctagca
gtggatgggggcgcagatggcgttcaggccaccaggaggcctcctgccaaccatttcttc
cactttgacggttcgcggtacgtttcctggctgcccagtttttctgtcgaggtgactcac
acacagctccttagggcagaccaaggaccccctgttcaaacgtcacaattggatgcaatg
gctcggcaggttcagcagctgtttcctcacatgccaatgccggtcataatggatgactta
cgactcacgcgctctgttgaaataacaattgaaaatattttggatgggcgtttggtcgcc
cctcctggtcgaaggtttcgcgaagagatcccaggtcccactctggtgaccactgttccc
cctcagctccaattgaccccacctagccatacaacaccacctgattcaagcgaggacagt
gtggacagcacttctcaggacagcactgttaaagaagaagtgccatcgaatcttggtggt
cgtttctcaaagtcacccacggaacgagagagaattctacacctacgcaaggaacagctg
gtgcaggctgcccgccgtcgctacctggacagacagtcctctcagccttccttggaaacg
gctgctgttgcagatccagtaccagatgaggttcttttacaaaacatttga
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