Thrips palmi (melon thrips): 117648592
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Entry
117648592 CDS
T08251
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117648592
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117648592
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3730
Focadhesin
CTNNBL
Motif
Other DBs
NCBI-GeneID:
117648592
NCBI-ProteinID:
XP_034247053
UniProt:
A0A6P8Z3K6
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Position
Unknown
AA seq
1211 aa
AA seq
DB search
MMEETVGNSREINAKLIDPVSVLKEITKLVSGIKKNDSKQRFNETPEMKQLRVLICDKIP
VRSVTACQGLLSLVEDNILPPIHAISLLVSAFSNIQNYSGVTAALGVLLRWDMNVRPKPY
ECPFSLYPVQHPLITLLKQKKDTWADVYRLVQNFFFHSEKCIKKENISLLQPLLLYVLCD
PQTTPHLPPESRQKTWALMLHFLDDLSVRQLVFQSIPWFQISDESRCVETGMLLLDLCES
SLRIRDGQLCVALAPLAAASIRNLVTRGADPEPCLATVFQLLCISPNAASCVMLLLADTI
TVCPASFLAPILKSCKEIFDLHACSEVSMYAVVSALLPWLASPSVLTREALQLGTKLLLE
IREAPSSYWSNTTSRLCANPWFRLLRHSFENVHEAAELCRVSESWRSEAEVKEWLTFVKT
SSPLFIARFSSYFCALLISGASDEVEEEGNEIIWAPLSVLVWLVKDEPEVSGRVTLALLY
QLAQEKRPLHQVALLRAIAAMGKHEENMVLVLGVLKSLSMGGFYSSTLALDLYLRVWKAQ
PRAYRFLHELLTTPFKGDNPDLIWELNIAKAAAIREICYTNPDAHGSELVPVLSQVLSQN
TTAEGSIASALAVQGITSLCRSGVMDVVSTWRGLSPKLLRDKRPDVIVSLCELLSVVSCL
STTTGKYEEFIAEVIVTLWGWIQHSNSEVACAALRALSEFHLNQLTLKTVPAAFRTNLKL
PPSFCKTPIDAARDPVDVLPYIPGDCWKQVLQGLGKLEDRKDAVCNMLACFMRHEIKLFH
RGLYNQLPSKPEPTSYEHLHDSSILKTMFGICYQTSKHEPMLVALALSILSNVFPRPLPP
VSWNFLEEKLKLGGTVRGHCLKILAMQCQASQSANRILLVVLSSLNLPDDIEDCKILFSM
LNYLGQGIPPNHLGPFVNKCILYATETFKNEEPSEESLLKSFLGHLKLALQSQDVHKANT
TALANITESLVNHLDMSHQIFDSFIECALVLPAKNVERIISPTLWWETSPDKIESAVRVS
SAIAMAQDSDMPLAALNECIDVCTAADSKAHECILEAIINVVRICRSHESNSRWLLQMLG
RIQAVKASQDNDSQQKQQVLHSYCDLFMVTVIALAGHDILTGDPKIIASSSQDRLLLFPQ
ALSALLDANETWRSLTTQVIEWLYDMSTASEVPSLLSQTFRLAITPLRYHQHFKKTTVWM
RILSSQQGCTL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggagactgtgggaaacagtagagaaattaatgccaaacttattgatccagtg
tcagtgctcaaggaaattacaaagcttgttagtggaataaaaaagaatgattcaaaacag
aggtttaatgagacccctgaaatgaaacagttgcgtgtcttgatctgcgataagatacct
gttcgctctgttaccgcttgccaagggcttctctcacttgttgaagacaacattttacct
cctatacatgctatttcattgctggtgtctgcattttctaatatccagaattattcaggt
gtgactgctgcactaggtgtgttgctgcgatgggacatgaatgttcgacccaagccatat
gagtgcccattttccttgtacccagttcaacacccccttattactctcctgaaacagaaa
aaagacacctgggccgatgtttatcgacttgttcaaaatttcttcttccactctgaaaaa
tgcatcaagaaggaaaatatatcattattgcaacccctattgctgtatgtactttgcgat
ccacaaacaactcctcatttgcctccagagagccgtcaaaaaacctgggcattgatgctt
cattttttggatgatttatctgttaggcaactagttttccagagcattccatggttccag
atttcagatgaatctcgctgtgtggagacaggaatgctgcttctggacctttgtgagtct
tcacttagaattcgcgatgggcaattgtgtgttgctctggctcctctagcagcagcatcg
atccgcaacctggtaactcgaggagcagacccggaaccctgccttgctacagtgttccaa
ctcctttgcatctcccccaatgcagctagttgtgtaatgctgttgcttgcagatactata
actgtttgtcctgcatcattccttgctccaatcttgaagtcttgcaaggaaatatttgac
ctccatgcttgcagtgaagtctcaatgtacgctgtagtcagtgctttactcccctggctc
gcctctccttccgttctcactagagaggctcttcaattaggtacaaagcttttactcgaa
atacgggaagctccctcaagttactggagcaacacaaccagtcgtttgtgtgccaatcct
tggtttcgccttttgagacattcttttgaaaatgtacatgaagctgcagagctatgcaga
gtcagtgagtcatggcgcagtgaggcagaagtaaaagaatggctaacttttgtgaagact
tcgtcgccattatttatagcgagattttcctcttatttctgtgccctgctgatttctggt
gcttcagatgaagtagaggaagaaggcaatgaaattatttgggcccccttgtctgtgttg
gtgtggctggtcaaagatgagccagaagtaagtggaagagtaacactggctcttctctac
caacttgctcaagaaaagagacctcttcatcaggttgctttactcagagcaatagcagct
atgggaaaacatgaggagaacatggtgcttgttttaggagtgttgaaatcattatctatg
gggggattttattcttctacccttgcattggacctttatcttcgtgtttggaaagcgcaa
ccaagagcatatcgctttttacatgaactcctcacaactccgttcaaaggagataatcca
gatctaatttgggagctgaacattgcaaaagcagcagcaattagagagatatgctacacc
aaccctgatgctcatggttctgaattggtgcctgtcctgtcccaagtgctctctcaaaat
acaaccgcagaaggaagtattgcatccgccttggctgtgcaaggcattaccagcctgtgc
cggtcgggtgtcatggacgtagtgagtacatggcgaggcctctctccaaaactgcttcgg
gacaagagaccagacgttattgttagcctatgtgagcttttgagtgttgtgtcatgcttg
tcaaccacaacaggcaaatatgaggaatttatagcagaagtaatagtgactttgtggggt
tggattcagcattccaattctgaggttgcctgcgctgctttgagagcactttctgaattt
cacctgaaccaactgactctgaaaactgtaccggctgctttccggaccaacttgaagctt
ccgccatcattttgtaaaacaccaattgatgctgctcgtgatccagttgatgttttgccg
tacatacctggagactgttggaagcaagtattacaaggtcttggcaaattagaagataga
aaagatgcagtttgcaacatgttggcctgtttcatgcgacatgagattaaactatttcac
agaggcttgtacaatcaactgccgtccaagccagaacccacatcttacgagcacttacat
gatagcagtattttgaaaacaatgtttggcatttgctatcagaccagtaagcatgaaccc
atgctggttgctcttgcactttcaatcctatctaatgtatttcccagaccgcttccacct
gtcagctggaactttttagaggaaaagctgaagcttggtggcacagtcagagggcactgt
ctaaagatattggccatgcagtgccaagcttcacaatctgccaaccgaattctgcttgtt
gtattatcttcattgaaccttccagatgatattgaggattgcaagattctcttttccatg
ttaaattatctagggcagggtataccaccaaatcatcttggtccatttgtcaacaagtgt
attttgtatgccacagagacttttaaaaatgaagaacccagtgaagaatctctgctgaaa
agttttctgggtcacctaaaattggctctccaatctcaggatgtgcataaagccaataca
actgctctcgctaatataactgagagcctggtgaaccatttagatatgtctcatcaaata
tttgactcattcatagaatgtgcactggtgctgcctgcaaagaatgtggaacgcattatc
tcacctactctgtggtgggaaacatcaccagataaaatcgaaagtgctgtgcgagtgagc
tctgctattgccatggctcaggattctgacatgcccctggctgctctcaatgaatgtatt
gacgtgtgcacagcagcagattccaaggctcatgagtgtatcctggaggctattataaat
gtggtcagaatttgccgaagtcatgaatctaacagccgttggctgctgcagatgttaggc
cgcatccaagctgtcaaagcaagccaagacaatgacagtcaacaaaagcagcaggttttg
cactcatattgtgatctcttcatggttactgttattgctttggctggccacgatatactt
actggtgatcccaaaataattgcttcgagtagtcaagatcgcttgttgttattccctcag
gctctctcagccttgcttgatgcaaatgaaacatggagaagtttaactacacaggtaatt
gaatggctctatgatatgagcacagcatctgaagtgcccagccttctctctcaaactttc
cgtctagctatcactcctctccgctatcaccaacattttaagaaaaccactgtctggatg
cgcattctatcttctcagcaaggttgtaccttatga
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