Thrips palmi (melon thrips): 117648670
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Entry
117648670 CDS
T08251
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117648670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117648670
Spliceosome [BR:
tpal03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117648670
Complex C
U4/U6.U5 tri-SnRNP related factors
117648670
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
117648670
NCBI-ProteinID:
XP_034247216
UniProt:
A0A6P8Z9P3
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All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MANRTVKDAKSVRGTNPQYIVEKIIRSRIYDSKYWKEECFALTAELLVDKAMELRFIGGV
FGGNIKPTPFLCLILKMLQIQPEKDIIVEFIKNEEFKYVRALGATYMRLVGTSIDCYKYL
EPLLNDGRKLRQQNRDGAYILTYMDEFIDSLLRDERVVDVILPRIQKRYVLEENNELEPK
VSALEDDLDDNMESSGDEEEVMDVQPPAKVEKSRRASPSADKDRAKDRDRRHRSRERDRD
RDRDRRLEDKKHRSRSRERERDRGRDYDRDRRHRSKDRDRDRGHRIEKDDRRHKEKDRVH
EKERDRDRGRDRERERDKDRGRDRDRDRNRDRDRARY
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcgcactgtcaaagacgccaaatcggtgcgaggaacgaaccctcagtacatt
gtggagaagatcatacgttctcgtatctatgacagcaagtattggaaggaagaatgcttt
gcgttgactgcagaattgttggtggacaaagccatggaacttcggttcattggcggagtg
tttggtggaaatattaagcccacaccattcctttgcctcatcttaaagatgctccaaatt
caacccgaaaaagacattattgttgaatttataaaaaatgaagaatttaagtatgttcga
gcacttggtgccacatacatgagattagttggcacttcaatagactgctataaatatttg
gagccccttctcaatgatggtcgcaagttacgtcagcagaacagagatggtgcatacatt
ctcacgtacatggacgagtttattgacagcttgctaagagatgagcgagttgttgatgta
attttacctcgcatccagaaaaggtacgttttagaagaaaacaatgagctggagcccaaa
gtatctgctctggaagacgatcttgatgacaacatggagtcttctggtgatgaagaggaa
gttatggatgttcaacctccagccaaagtggagaaaagtagacgtgcatctccatccgca
gacaaggacagagcaaaggatagagaccgccgtcatcgcagcagggaacgggatagagac
cgagacagagatagaagacttgaagacaagaagcatcgcagtcgcagtagagaaagagaa
agagatcgaggccgtgactatgatagagacagaagacatcgctcaaaggacagagatcgt
gaccgtggtcatcgcatagaaaaagatgatcgaaggcacaaggaaaaggatagagttcat
gaaaaagagagggaccgcgaccgaggcagagatcgggaaagagagagagacaaagatcgt
ggcagagaccgtgacagagaccgaaatcgtgatagagatcgtgccagatattaa
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