Thrips palmi (melon thrips): 117649049
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Entry
117649049 CDS
T08251
Name
(RefSeq) protein patched homolog 2-like isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tpal04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117649049
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117649049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpal02000
]
117649049
Transporters [BR:
tpal02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
117649049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
ACR_tran
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
117649049
NCBI-ProteinID:
XP_034247319
UniProt:
A0A6P8ZRB6
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MEQEPRKASHDKKCQQKCTYRYIAYIEETFHNHGERVAQNPRMCILIAFLSVLAMVAGFL
CFRQERNPLRLWIPEDSHFYTDTNWLMAEYGEGLRLQTVLITAPDVLQPNVMQQLLKIHE
LLVNPIGPTTAWEDICFKVPIIGFNVEESRIRREVEGSRLSDEINTSFNEAFFKEGANPS
VSGPPNIQQMMTDETFDPSILLGTTLYCSIVKNMELGCLQQNLLDLWRFSETKMRNLTKA
KMISDLNSTIFSPTLGHPISYKSLLGGITYDENGVIISAKALMTLYAVHVNFSTVNMDEV
GNQGGTADWANGPGLEWESYFLKIMHKVAANSTGMEIFYEAGRSFGDISASGMFQDMDKI
FIGVILMLVYIQVQQTNRSWVETRMIPSMVGLLCVGLAFVSSCGLCSLVGIPYGPVHTSL
PFLLLGIGVDDMFVILNCWNSLPNQDKILPIPQRMGVAMRHAGLSISITSVTDFVAFLIG
STTILPSLRSFCLYAGVGVLITFILQSTLFVAALALDQTRLEAGRNCVIPCVRHTPPKLH
DVEYFSQCSYGLNFIYSNVIMTKFGKIFVILVTVVFVSASVIGNLRIKQEFKPEWFLDNE
SHLYKFLEKRNEFFPDFGNSAGIYMGQLHYNEELKKIGLLVEQLKNHSDILMNVEDWWSG
FQRYVKFHFRKDIESEVLSDSDFNQYISQYLFSPSGARFQKNFRFSEPLECGKPASNITV
ASIDFFFRKFESSEQSVPAMNAVKFLVVNANFTSGDRFATVWAKVFANWVTDEVIAFELV
RNIVLAILAVAVTTFILLGSIYASALVLSCVILTLVNTIGYMYFWGLTIDLVSSIALVLA
VGLCVDFAAHIAYAFMGVKGPRNERAMFAVSYIGGAVLHGGATTLLALSVLVFSNSYIFT
AFFKVFLLVIVLGLFHGIVFLPVVLSVIGPKPYPNAKQLQCNIVNDQALEPVNEGLSFIS
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggaaccaaggaaagcatcgcacgacaaaaagtgtcaacaaaagtgcacttat
cgatacattgcatacattgaagaaacattccacaatcatggagaaagagtggcacaaaat
ccgagaatgtgtatactgattgcattcttgtctgtcctggcgatggtggctggatttctt
tgctttaggcaagagagaaatccacttcgcttgtggatacctgaggactctcacttttac
actgatacaaattggttaatggctgagtatggcgaaggcctaagattacaaactgttctg
atcactgctccagatgtcctacagccaaatgtaatgcaacagcttttgaaaatccatgag
ttacttgtcaaccctataggtccaacaactgcttgggaagatatttgcttcaaagtccca
attattggttttaatgtagaggagtcaagaatacgtcgagaagtggaaggatctagattg
tctgacgagatcaatacctcattcaacgaagccttttttaaagaaggtgcgaacccaagt
gtatctggaccccccaatattcagcaaatgatgaccgatgagacatttgatccatcaatt
ctacttggtactactttgtactgtagcatagtcaaaaacatggaacttggttgtttgcaa
cagaatctgttagatctctggaggttcagtgaaactaaaatgaggaatctcaccaaggca
aaaatgataagtgatctcaatagtacaatatttagcccaactttagggcacccaatttct
tataaatcactacttggtggcataacttatgatgaaaatggagtcataatttctgccaaa
gctttgatgactctgtatgcagttcatgtcaacttttcaactgtgaatatggatgaggtt
ggcaaccaaggtggcactgcagattgggcaaatggaccaggtctagaatgggaatcctat
tttttaaaaataatgcacaaagttgctgcaaatagcacagggatggaaattttctatgaa
gctggaagaagctttggagacataagtgcttcaggaatgttccaggacatggacaaaatt
ttcattggtgtaattttaatgctggtttacattcaagtgcaacagaccaacagaagctgg
gtagaaactcgaatgatacccagcatggtaggcctcctgtgtgttggcttggcttttgtg
tcatcatgtggcctctgttctcttgtgggtattccctatggccctgttcacacatccctc
cccttcctgttattgggaatcggtgttgacgatatgtttgtaatactcaactgttggaac
tcattaccaaaccaagataaaatcttaccaataccccaacgcatgggagtggctatgcgt
catgctggtctatcaatcagtatcacaagtgtcacagattttgtggcatttttgattggg
tctacaactattttaccttctttgcgatccttctgcttgtacgctggagtgggggtgctc
ataacattcattcttcagtcaaccctttttgtggctgctcttgcccttgatcaaacacgc
ctggaagcagggcgcaactgcgtgataccatgtgtgcggcacacaccgccaaaactccat
gatgttgagtacttttcgcagtgctcttacggtcttaattttatttattcgaatgtaatc
atgaccaaatttggaaagatatttgttattcttgtaactgttgtgtttgtgagtgcttcg
gttatcggaaatttaagaattaaacaagagtttaagcctgagtggtttttggacaatgaa
agtcatctgtacaagttcctagagaaacgcaatgaattcttccctgactttggcaatagt
gctggaatatacatgggtcaactgcactataatgaagaattgaaaaaaattgggctcctt
gttgagcagttaaaaaatcacagtgatattttaatgaatgttgaagactggtggtcaggt
tttcaaagatatgtgaagttccactttaggaaagacatagagagtgaagttctcagtgat
agtgatttcaatcaatatatatctcagtatctttttagtccatctggagctcgctttcaa
aaaaacttcaggttctctgagcctcttgagtgtggcaaaccggcctccaatattactgtt
gccagtattgactttttcttcagaaaatttgaaagttctgaacaaagtgtacctgcaatg
aatgctgtgaaattcctggtggtgaatgccaactttacctctggtgaccgatttgctact
gtgtgggcaaaagtgtttgctaattgggtcactgatgaggtgattgcatttgaacttgtt
cgaaacattgtgctggctattttagctgtggcagtaacaacatttattctcctgggatct
atatatgcaagcgctttggttctctcatgtgtcattcttactctggtgaacaccattgga
tatatgtacttttggggtttaaccattgaccttgtttcaagtattgctttggtcctggct
gtcggtctgtgtgttgattttgctgcccacattgcctatgcattcatgggtgttaaaggg
ccccggaatgaaagagcgatgtttgcggtgtcttacattggaggtgcagttttacatggt
ggagcgaccactttgttagccctttcagtccttgtcttttctaattcttacatcttcact
gcatttttcaaggtattccttttggtaatagtacttggacttttccatggtattgtcttt
ctgccagttgtcttgagtgtaattggcccaaaaccttatccaaatgcaaagcaacttcaa
tgtaacattgttaatgaccaagctttagagcctgtgaatgaagggctgtcattcatctca
tga
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