Thrips palmi (melon thrips): 117649229
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Entry
117649229 CDS
T08251
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117649229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117649229
04121 Ubiquitin system [BR:
tpal04121
]
117649229
03036 Chromosome and associated proteins [BR:
tpal03036
]
117649229
03400 DNA repair and recombination proteins [BR:
tpal03400
]
117649229
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117649229
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117649229
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117649229
DNA repair and recombination proteins [BR:
tpal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
117649229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
BRCT
zf-RING_6
BRCT_2
zf-C3HC4_3
zf-RING_10
Ank_KRIT1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117649229
NCBI-ProteinID:
XP_034247669
UniProt:
A0A6P8ZRI6
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MLVVVTINSATQLLACKIKCINFVRELNLNFAIATALLMRSWSRGVYFRLRQLIELSLFS
LTMAASSEDSAGWKNLKPAMADLQDLLRCWTCNKVFTEPVSYRCGHFFCGHCAKEAGSKC
GSCNVPSLPSEIVPDRIVTAVLGCFQTLSAVINGEREAVCQLAVRAPNMENSSSKSVHSV
DNSAVGINKSPLNGSKPDPPKGKEDSTITKASPAKSEIEKPFVKPSRGRKPSLKGAKKPV
ALKKSEISNEKKSLDCLEKNNPGKKTKLGLDRSLSIDAAVSTASERSKKTGAQDEQFSPD
CFATPKKPRKSNNKLSDVSSISKTKEMNSTVKSTPRKSNTPGRELAKKNHKGETPLHVAC
IKGNIARVRSLLEANATPNTKDNAGWTPLHEAANHGFTEVVELLVKAGAFLDVPGAGNLT
PLHEAVANNHIEIVKLLVAHGADIYARSSDGNTPLDLAISKELKNALLNSSKVEASPKTD
SNTLKSALVQEEAVLYGDHGLTSDEKKQLQTIAATLNVKLVPAFGPDVTHFVAASDDEGS
CPPSLDLLSALLKGTFLLNRDWLELGERNLQDDRFELAGITDFIDAEAPKLSRTNSLKQL
PRLFNGCHFYVTNNAHFNLTNCNLTRADIIALIKAGAGIVLTRQPDPEAIPASEKTVPYH
APRNGALVSTSHFILYSPGKGEPEMKYNMKHCKTLPVEWFINCVLNWQLLDP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtagttgtgactataaacagtgctacacagctactggcatgcaaaataaaatgc
atcaactttgtgcgtgaacttaatcttaattttgcaattgcgacggcattgctaatgcgg
tcttggtctagaggggtgtatttccgactccgtcagttgattgaactatcgttgttttct
ttgacaatggcagcgagttcagaagacagtgcgggttggaaaaatctgaagccagccatg
gcagacttgcaagatttacttaggtgttggacatgcaacaaagttttcacagaacccgtt
agctatcgatgtggccatttcttttgtggccattgtgccaaagaagctgggtcaaaatgc
ggttcgtgcaatgttccttccctgccatcagaaattgtacccgatcggatagtcactgct
gtccttggatgctttcagaccttatctgccgttataaatggggaacgagaagctgtttgt
caacttgctgttcgtgcaccaaatatggaaaatagcagcagtaagtccgtgcacagtgta
gacaacagtgccgtgggaattaataaaagtcccctaaatggatctaaaccagaccctccg
aaaggcaaggaagactcaacaataaccaaagcatctcctgctaagtcggaaattgagaaa
ccatttgttaaaccatccagaggcagaaaaccatctttgaaaggggctaaaaaaccggtt
gcattaaagaagtctgaaatcagtaatgagaaaaaatctttggactgtctggaaaagaac
aatcctggcaaaaagacaaaacttggtttggaccgaagcttaagcattgatgcagctgta
tccacagcatcagaaagaagcaagaagacaggtgcccaggatgaacaattttcacccgat
tgttttgctactcccaagaagcccagaaagagcaacaataaactgtctgatgtttcttcc
atctctaaaaccaaagagatgaactctactgtgaagtcgactccaagaaaaagtaataca
cccggaagagaacttgcgaagaaaaaccacaagggtgagaccccgctacatgttgcttgc
atcaaaggaaatatagcccgtgtgcgctctttactggaagccaatgcaacacctaacact
aaagacaatgcaggctggactccccttcatgaggcagcaaatcatggattcacagaagtg
gttgaacttttagtcaaagctggagctttccttgatgttcctggagctggaaatttgacg
ccacttcatgaggctgtcgcaaataaccatattgagattgttaaacttcttgtggctcat
ggtgcagacatatatgctagatcatcagacggcaacactcctttggatctagctatatct
aaggaactaaaaaacgctcttctcaactcaagcaaggtagaagcatctcccaaaactgat
tcaaatactttaaagtctgctcttgtccaagaagaagcagttctgtatggagaccatggt
cttacttctgatgaaaaaaagcaactccagactattgccgcaactttaaatgttaaactg
gttccagcatttggtcctgatgtaacacattttgttgctgcctctgatgatgaaggctct
tgcccaccatccctggatttattgtcagcattattgaaaggcactttccttttgaataga
gattggctggaacttggtgagagaaatttacaagacgataggtttgaacttgctggcatc
acagatttcatagatgcagaagcacctaaacttagtcgaaccaattccttgaaacagctg
ccgagattattcaatgggtgccacttttatgtcaccaataatgcacacttcaatttaacc
aactgtaatttaaccagagctgatataattgctctcattaaagctggagctggtattgtt
ttgacacgccaacctgacccagaagccatacccgcttcagagaaaacagttccataccat
gctccaagaaatggtgccctagtgtctacctcacacttcatactttactcccccggtaaa
ggggaacctgaaatgaagtataatatgaaacattgtaaaacgcttccagtagaatggttc
attaactgtgtattaaactggcagctcttagatccttag
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