Thrips palmi (melon thrips): 117649312
Help
Entry
117649312 CDS
T08251
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03030
DNA replication
tpal03410
Base excision repair
tpal03420
Nucleotide excision repair
tpal03430
Mismatch repair
tpal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117649312
03410 Base excision repair
117649312
03420 Nucleotide excision repair
117649312
03430 Mismatch repair
117649312
03440 Homologous recombination
117649312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpal03032
]
117649312
03400 DNA repair and recombination proteins [BR:
tpal03400
]
117649312
Enzymes [BR:
tpal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117649312
DNA replication proteins [BR:
tpal03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
117649312
DNA repair and recombination proteins [BR:
tpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
117649312
MMR (mismatch excision repair)
DNA polymerase delta complex
117649312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DUF6356
Motif
Other DBs
NCBI-GeneID:
117649312
NCBI-ProteinID:
XP_034247843
UniProt:
A0A6P8ZRP1
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MDKRKQPFGKSPAPPKRPRADDDEDDEFPGTFEEELAFMDANEAEMVEATGEGPDTNQTS
VKWSRPAPPPLDPQKDNLTFQQIDVDHYTGSPMAGMPGAQSGPVPVMRLYGVTMEGNSVC
CHVHGFTPYFFVSTPNGFNDSHCKPFKDSLNKAVLADMKGNRDNVQEAVLAVEIVKKQSL
YGYRGDDMQQFLRVTVALPRLIAPSKRLLEKGDVFTALGTHAFTSYESNIDYDIRYMVDA
NMVGCNWIELPTGHWKMRQKNSSTLPFVSRCQLEVDVSWEKLISHQPEGEWAKVAPFRIL
SFDIECAGRKGIFPEPDHDPVIQIANMVIKQGEAEPFIRNVFTLNTCAPIVGCQVISCDK
ETEMLEKWADFVREVDPDIFTGYNITNFDFPYLINRAKHLTVRNFSFLGRIKNIQSVIKD
TQLYSKQMGRRENKSVNFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSV
ISDLQNGTAQTRRRLAVYCLKDAYLPLRLLEKLMCIINYMEMARVTGVTLGSLLTRGQQI
KVVSQLLRKAKEHDYIMPTYQSSGGEDQYEGATVIEPKRGYYGDPISTLDFSSLYPSIMM
AHNLCYTTLLQGNSKEKLGLTADQYSRTPANNYFVKASVRKGLLPDILESLLNARKKAKA
DLKKETDPFKQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTK
TEVESKYRIENGYEYDAVVIYGDTDSVMVKFGVKTLEEAMRLGQEAAEYVTSKFIKPIKL
EFEKVYFPYLLINKKRYAGLYFTRADKYDKMDCKGLETVRRDNCPLVANMMNTCLQKILI
DRNPDGAVAYAKQIISDLLCNRIDISNLVITKELTKSDYAAKQAHVELAAKMKKRDPGTA
PKLGDRVPYVLISASKGTPAYMKAEDPIYVLENSIPLDFTYYLENQLSKPLLRIFSPILG
DKADSILLRGDHTRTRAVVTSRVGALSAFTVKRQTCLGCKAVLPKDQESNALCSHCSPNE
AKLFLSELTKYRTLEDRFSRLWTECQRCQGSLHEEVLCTSRDCPIFYMRKKIQIELDTQD
KSLQRFGDPTW
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggataaacggaagcaacctttcggcaaaagccctgcgccgccgaaacgtccacgggct
gacgacgatgaagatgatgaatttcccggtacctttgaagaggagttggcattcatggat
gccaatgaggcagaaatggtcgaggctacaggagagggaccagacactaatcagacctca
gtgaaatggagccgtcctgcccctcctcccttggatccacaaaaggacaatttaactttt
caacagatcgatgtggaccattacactgggagtcccatggctggaatgcctggtgctcag
agtggaccagttcctgtgatgcggctctatggtgttacaatggagggtaattcagtgtgt
tgtcatgttcatggtttcactccatatttttttgtatcaaccccaaatggattcaatgat
agtcactgcaagccatttaaggattctttaaataaagctgttttagctgatatgaaagga
aatcgtgacaatgttcaagaagctgtgctagctgttgaaattgtcaagaagcaaagtttg
tatgggtatcgtggtgatgatatgcagcagtttcttcgtgtgacagtggcactgcctcgc
ctcattgcaccttccaagagattgcttgaaaaaggtgatgtgtttactgccttaggtact
cacgccttcactagctatgagtcaaacattgattatgacatcaggtacatggtggatgca
aatatggtcggttgcaattggattgagctgccaactggacactggaagatgaggcaaaaa
aatagctcaacccttccatttgtatcaagatgtcaacttgaagtggatgtctcatgggaa
aagttaatctctcatcaacctgagggagaatgggcaaaggtggctcccttccgtattctc
agttttgatattgaatgtgctggacggaaaggtattttcccagaaccagaccatgatcca
gtcattcaaattgccaacatggttatcaaacaaggggaagcagaacctttcatacggaat
gttttcaccttaaacacatgtgctcccattgtggggtgccaagtcatcagctgtgataaa
gaaactgaaatgctagagaaatgggcagattttgtaagggaagttgatcctgatattttc
actggctacaacatcacaaactttgattttccatacttgattaatagagccaaacatttg
actgtgcgcaacttttcattcttgggaagaattaaaaacatccaatctgtcatcaaagat
acacagttgtatagtaaacaaatgggccgtcgagaaaataagagtgtcaactttgagggc
cgagtaccttttgacttgcttcttgtgcttgtccgagattataagttgagatcttacact
ttgaacgctgtcagttaccatttccttcaggaacaaaaagaagatgtgcatcactcagtc
atctcagaccttcaaaacggcactgctcagactcgccgccgtctggctgtttactgcctc
aaagacgcctatcttccactgagattgttagaaaagctgatgtgcatcatcaactacatg
gaaatggctcgtgtaactggagtgactctgggtagtctgcttactagaggccagcaaata
aaagttgtttctcaacttttgcgtaaagccaaggagcatgactacatcatgcccacctac
caaagcagtggaggggaggaccaatatgaaggtgccactgttattgaacctaagagaggg
tattatggtgacccgatctcaactctggatttcagttctctataccccagcatcatgatg
gcccataacttgtgttacacaacacttctccagggtaactcgaaggaaaaacttggactg
acggctgatcagtactcacgaacccctgccaacaattactttgtgaaagcatcggtacgc
aaagggcttctgccggacattctggagagtctgttgaatgctcgtaaaaaagccaaagca
gacctaaagaaagaaacggatccctttaagcagaaagtgcttgatggtcgtcagttagct
ttaaagatttctgccaattcagtctatggtttcacaggcgcccaagtaggaaaactgcca
tgccttgaaatatctggaagtgtcacagcttatggtcgtaccatgattgaacaaaccaag
actgaggttgaatcgaaatatcgcattgaaaatggatatgaatatgatgctgttgtaatt
tatggagacacggattctgtgatggttaaatttggtgtcaaaactttggaggaagccatg
agattaggtcaagaagctgctgaatatgttacatctaaattcattaaacctatcaaacta
gaatttgaaaaagtgtattttccctaccttttaattaacaagaaaaggtatgctggatta
tacttcactcgagctgataagtatgacaaaatggactgcaaaggattagaaacagttcgt
cgtgataattgtcctttagttgccaacatgatgaacacatgtctgcagaagattcttatt
gaccgtaatcctgatggtgctgttgcatatgccaaacagattatttctgatctactgtgc
aatcgcatcgatatatctaatttagttattaccaaagaattgaccaagtctgattatgca
gctaaacaagcccatgttgaactagctgcaaaaatgaaaaagcgagatcctggaactgcg
ccaaagcttggagatcgagtgccctatgtgctgatctctgcctctaaaggaaccccagcc
tacatgaaagcagaggatcccatctatgtccttgaaaatagtattccacttgattttacc
tattacttagaaaaccaactgtcaaagccattgctgagaatattttctccaattttggga
gacaaggcagattccatattactccgtggtgaccacactcgcactcgagccgtggtcacg
tcgcgggtcggtgctctatctgccttcactgtcaagcgccagacctgtctggggtgcaag
gcggttttgcccaaagaccaagagagcaatgcactgtgttcacattgctccccaaatgaa
gccaagttgttcctctcagaattgacaaaatatcgcactttggaagacaggttcagcaga
ttgtggaccgaatgtcagaggtgtcaagggtcattacatgaagaggtcctgtgcaccagc
cgagactgtcccatcttctacatgcgtaagaaaatccaaattgaacttgatactcaagac
aaatctctccagcgttttggtgacccaacttggtga
DBGET
integrated database retrieval system
