Thrips palmi (melon thrips): 117649468
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Entry
117649468 CDS
T08251
Name
(RefSeq) structural maintenance of chromosomes protein 1A-like
KO
K06636
structural maintenance of chromosome 1
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpal03036
]
117649468
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117649468
Meiosis-specific proteins
Cohesin complex and associated proteins
117649468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
SbcC_Walker_B
NPV_P10
Tnp_22_trimer
DUF1664
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117649468
NCBI-ProteinID:
XP_034248199
UniProt:
A0A6P8ZSI4
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MAKPILYNVEVENFKTYAGKVMIGPFKPFMAVIGPNGSGKSNFVDAISFALGEKASKLRV
KDLSDLIHGAHIGKPVSESASVTLYFKYVDTSEDASSLTPSFSIFRRVVTRTSQEYFINN
GSVKPVKYLAELNALGLNIKAENFLIYQGKVETVALMDPKQRTGLFEEISGSKAFKRQYN
DLKAEMLGAVESSHLAFLKQRTFRGEYQEAKQERGEVRKYELLLEELREKRVELQLFKLF
CNQNGLTKLEEELSLKQTEVEGMQSDKKESEKKLKHAVKSFGTASRELAKLETEVQDKET
QIKKVKLPFIKAKEEAAHLSKKLETAQSSLKQALDVQKKHLDTLKFLKEELANVRAEEQS
FMESVAEESISQGRSIELEESQAKDYNELKRQAAHLSGSLRQQIESLTREHKSNLDRKEN
ETRKCSSIKDRIAKKSLEKEECMKRCEKLSERISSNEKELQEMLAKQKTFKSSSLSCQEN
IASIQAELSQITAELSDAHMEKHDVNARKKKQVVVGRLKELFPGVYDRLKYLCEPVNRRY
SIALTRVMGKHMNAIVVDKERTARLCIQYLKEQMLDAELFLPLDYIEVKPLQEYLRQIGG
HHTHLLFDVVTYNPPEVRKAILFATRSVLVCDTPDDAMQMAFYNSQKMLTAIALDGTFYQ
KSGLISGGSADLARKAKQWDEKQVAQMQAKKTDLSEKLKSLLKQSRCQSELNIVDCEVKG
YTSRIKLMKEDLEKSLSRIRLIDEELDKLNEAFQGCQPLLNEIEQTIEGQSDKLKTLEKK
VHKLEDRVFSEFCNKIGVPNIRAYEEAGLKVYEEREKKRMEFDNRKNCIKNQLEYEKTVD
TESNIKRWNDEIQNRESALTDAKKLVEDNQNAVTTLTDELKILNDAVKEKRSEVDLKEKE
TDKAKKDVKAIGDTIHGMQKQMLAMETSIGNLHRARRAILIHCHVEGIVLPIVEGDIRSL
VPGRSDESESGSSTSASVSADSQATTSHIVIDYDSLSSNIRKLKGASLKEHETSLKENIA
KLSAKIMSMGSMNLKVAEKLEETSDKLKETNSEIEDARKQARKAINAFEKIKKQRCDAFN
ECFDFVSNEIDVIYKQLTQSTSAMALLTAENVEEPYLGGIAYCCIAPGKPCKPMQSLSGG
EKTIASIALVIALHRHGKAPCLILDEIDAALDNSNIANVARFFDTNKNQFHTIAISLQPA
FYCHADALVGVTVNFREDRKGKKDPESVVFLYDLEVHDQKKN
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcccattttatacaatgttgaagttgaaaacttcaaaacttatgccggcaaa
gtgatgataggaccgttcaagccgttcatggctgttataggacccaatggctcaggaaaa
tctaattttgtcgatgctatctcatttgcattgggagagaaagcatcaaagttaagggtg
aaggacctctctgacctcatccatggagctcacattgggaagccagtttctgaatcagca
tctgtgactttgtacttcaaatatgtggatacgtctgaagatgcttcgtctcttacgcca
tccttctccatatttcgaagggttgtcacaagaacttctcaggaatacttcataaacaac
gggtctgtgaaacctgtcaagtacttggctgagctgaatgccttaggcctcaatatcaaa
gcagagaactttctcatttaccaaggaaaagtagaaacagtagcgctgatggatccaaaa
cagagaacaggtctctttgaggagataagcgggtctaaagcctttaagaggcaatataat
gatttaaaggcagagatgcttggagctgttgaatcaagtcatttagcctttttaaaacag
cgcaccttcagaggagaataccaagaagcaaagcaggagcgaggtgaagttcgtaaatat
gagctgctccttgaggaattgagagaaaagagagttgaattgcaactatttaagcttttt
tgcaatcagaatggcctaacaaagcttgaggaggaattgtctcttaagcaaacagaggta
gaaggaatgcaatcagacaaaaaggaatctgaaaaaaagttgaaacatgctgttaagtct
tttgggacagctagccgtgagctggcaaagctggagacagaggtccaagacaaggaaact
caaatcaaaaaagttaaattgccatttattaaggccaaagaggaagctgctcacctgagt
aaaaagctggaaacagcacagtcatctttgaaacaggcattagatgttcagaagaaacat
ttagataccttgaaatttctgaaggaagagctagcaaatgtccgggctgaggaacagagt
tttatggaaagcgttgctgaagagagtatcagtcaaggaaggagtattgaacttgaagaa
tcacaggccaaagattacaatgagttgaagagacaagctgctcacctctcaggttcactc
cgtcagcaaatagaatcccttaccagagaacataaatccaatttagaccgcaaggaaaat
gaaacaagaaaatgttctagcatcaaagacagaattgctaaaaaatctctagaaaaagaa
gaatgcatgaagcgctgtgagaagctctctgagcgcataagttcaaatgagaaagagttg
caagaaatgttggcaaagcagaaaacatttaagtcaagtagtctttcttgccaggagaac
atagcttcaatacaagctgaattaagtcaaataacggctgaattgagtgatgcccacatg
gaaaaacatgatgtgaatgccaggaaaaagaaacaagtggttgttggaagattaaaagaa
ctctttccaggagtgtatgatagattgaagtatttatgtgaaccagtgaacaggagatat
tccattgctcttaccagagtcatgggcaaacacatgaatgccattgttgtggacaaagag
aggactgctaggctttgtatacagtatctcaaagaacaaatgctggatgctgagttattt
ctgccattggattatattgaggtcaaaccattacaagaatatctacgccagataggagga
caccatacacatttactctttgatgttgttacctacaaccctccagaagtcaggaaagct
attctttttgcaacaagaagtgtcttagtatgtgatactccagatgatgctatgcaaatg
gctttttataattctcagaagatgctcacagccattgccctagatggtacattttaccaa
aaaagtggcttaatttctggtggaagtgctgacctggccagaaaagcaaaacagtgggat
gagaaacaagtggctcaaatgcaagcgaaaaagactgatctgtctgaaaagctaaaatct
ttgctcaaacaatctcgatgtcaatctgagctcaatattgtagactgtgaagtaaaggga
tatacaagtagaataaaactgatgaaagaagatctggaaaaatctctttccagaattcgt
ttaatagatgaagagttggacaaattaaatgaagctttccaaggctgccagcctctgtta
aatgaaattgaacaaacgattgaaggtcaaagtgacaagttaaagactctggagaaaaaa
gtgcataaacttgaggaccgtgtgttttctgaattttgtaacaaaattggtgtcccaaac
attagagcttatgaagaagcagggctcaaagtctatgaggaacgtgaaaagaaacgtatg
gagtttgataatcgcaaaaattgcattaaaaaccaacttgaatatgagaagactgtggat
actgaaagtaacatcaaacggtggaatgatgaaatacagaacagagaatctgccttgact
gatgctaagaagttggttgaagataatcagaatgcagtaaccactttgacagatgaatta
aagatattgaatgatgccgttaaagagaagagaagtgaagtcgatttgaaggagaaagag
actgataaggccaagaaagatgtgaaggccattggtgataccattcatggcatgcaaaag
cagatgcttgcaatggaaaccagcattggaaaccttcatcgtgcacgtcgtgctattctg
attcattgtcatgttgaaggaattgtcttaccaatagttgagggggacattagatcactt
gtacctggtagaagtgatgagagtgaaagtggtagttctacaagtgcgagtgtctccgcc
gattctcaagcaacgacttcacacatcgtaattgattatgacagtctctcttctaatatc
agaaagcttaaaggagcttctttaaaagagcatgaaaccagtttaaaagaaaacatagca
aaattatctgcaaagattatgtccatgggttccatgaacttaaaggttgctgaaaaatta
gaagaaacctctgacaagctgaaagaaacaaattccgaaatagaagatgctcggaaacaa
gcaagaaaggctatcaatgcatttgaaaagatcaagaaacagcgctgcgatgccttcaat
gaatgctttgactttgtctctaatgaaattgatgtaatttacaagcaattgactcaatca
acgtctgctatggctctcctgacagcagaaaatgtagaggagccatatttgggtgggatt
gcttattgctgtattgcacctggaaagccctgcaaaccaatgcaaagcctctctggaggg
gagaaaacaattgcttcgattgcattagtcatcgctttacacaggcatggcaaagctcct
tgccttatcctcgatgaaattgatgctgctctcgataattcaaacatagcaaatgttgca
cgtttttttgacaccaacaaaaatcaatttcatactattgccatctctctccagccagca
ttctactgccatgcagatgccttggttggtgtcacagttaatttccgtgaagaccgcaaa
gggaagaaggatcctgaaagtgttgtgttcctgtatgatctggaagtccatgaccagaag
aagaactag
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