Thrips palmi (melon thrips): 117649842
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Entry
117649842 CDS
T08251
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpal03021
]
117649842
Transcription machinery [BR:
tpal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117649842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_2
ARM_ECM29
Vac14_Fab1_bd
Arm
MgtE_N
Motif
Other DBs
NCBI-GeneID:
117649842
NCBI-ProteinID:
XP_034248884
UniProt:
A0A6P8ZUJ9
LinkDB
All DBs
Position
Unknown
AA seq
1859 aa
AA seq
DB search
MTSRLDRLFVLLENGSSAVTRKAAACQLGEVQRLHPHELHNLLGRIHTYLHSPNWETRVA
AGQAVQAILSNVPEWDPPGCFKSEEGSSASHSLFQMGRLTFKKFDVDQVMANSAHLLGSE
GREYNTDESLAGLDTKERLARQRQQVNAQLGLDTMAVLGVDTSDIVSEEDIACASVLLPK
AESKKSISEMLGQGPCGTENFKLRRLSRANSKLNALGDLDNTGEPDCKRIKLEDSNEINF
KSEDLAQLAMPGNGESVPDGTGSWGDTIDWPFEFFCDQLCRDLFSSKWEVRHGAATALRE
FVKIHGPGAGKQANVSQTEMEALHQQCLEDIALRLLCVLGLDRFGDFVSDQVTAPVRETC
AQALGMVLQLLPPEGVQCTLKVLLQLLKHEEWQARHGGLLGLKYVLAVREDLLGELLPLA
YPHIMEGLADPVDDVGAVAASALIPVAETVINLMGNQVDGTIQQLWDLLEEQDELAAACN
SFMGLLAALLSVPKCQTLLSPLPLSVVVPRLWPFLSHNTSSVRRATLQTLFTLTGSQNID
WTLEVLQAALRHVFQMVLLEPIREIQLLAEKVWINLLQNSPLSQLLLAACPYVTTWLCLT
MQPAKVSFDNSVLIHCVRESSEKSTRRTKAFSSLESNCGGTVPKLYIGGGQTVPASSHDP
NVVQARVIACRMLGALSCYLVQKAPGVIYTPDVESPVECYTRVMLVHLNSKSALQRMVAA
LVLMEWGKRHNQVKLNTEGLAVNNEAMPCPVNLSSCLHSCLNESIYYDEIAHAYTKLLQD
AWDFVALLKHYKLSVPGYDGNKQVLTLEQIQQLVGTVSEELLSQQKLKPKVMDTLEQSRK
NIQKAVAQTMSDQSVLHIMTQAAIANAVIMLNCLPEKLHPVCKSVMESIKREENDMLQSL
SAECLASLIDMATSRTPCPVDKIITNLCIFLRSDPEFTPQIKPSLDNNAHNSAQNSARTV
VAGAAASHKLNNFNGIPTLVNQQKSAERAIYRRSNSTGRGPGRPPIHDLPPEDLFPADEE
AHKRNQIMRRGATFALKSVTAHFGNALPTKLPKLWEIITGQIQPKPDTVPLDLSKVAGDQ
AAKELIADLQVLEVTSDALQRDLLPEIISYLPQLCQLLTHTYSAVRHMAARCIGVLASLS
SAPVMEQVVTRVLPLLGVVHNDTYRQGAMEAIMCIIEKLQTNIIPFVVVLIVPLLGRMSD
HDQSVRMCATHSFATLIQLMPLDGGVPDSPDVSSEFAKHKQAEKQFLGQLFNPKSISDFK
IPVPINAQLRSYQQSGVNWLAFLNQYKLHGILCDDMGLGKTLQSICILASDHYNRAVNYK
KTRNADSAPLQSLVICPPTLTGHWVYEVEKFLPKKYLNPLQYAGPPVEREKLRSTFKSYN
LIVASYDIVRKDIDFFSAIRWNYCILDEGQYIKNGKTKASKAIKQLVANHRLILSGTPIQ
NNVLELWSLFDFLMPGFLGTEKQFNARYSRPILASREAKSSAKEQEASVLAMEALHRQVL
PFLLRRVKEDVLHDLPPKITQDYYCELSPLQQRLYEDFARTPAHQSLAETIAHSDAAANA
LQANTHIFQALRYLQKVCNHPRLVLGPSHPEYDKIAAELHLQKSDLQDIQHAAKLPALRQ
LLLDCGIGAEPSSVTSGQPGDIAINQHRALIFCQLQVMLDIVEDDLLKKHMPGVSYLRLD
GSVPATQRQAVVQRFNKDPSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMD
RAHRIGQKKVVNVYRLITRSTLEEKIMGLQKFKMLTANTVISSENASMETMGTDQLLDLF
SLDGKAKTPNGSSNSIANVGGLTGGSVQSMLNTLPDLWDAKEYEEEYDMKTFMSTLRKN
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccggctggatcgattatttgtcctgcttgaaaatgggtcctctgctgttacc
cgcaaagctgctgcttgccagttgggtgaagttcaaagactgcatccacatgaactccac
aacttgttgggtcgaatccacacttatttacacagtccaaactgggaaacaagagtagca
gcaggacaggctgttcaagcaatacttagcaatgtgccagagtgggacccacctggatgt
ttcaaaagtgaagagggttcttctgcttctcattcgctctttcaaatgggtcgtctcacg
ttcaagaaatttgacgtggaccaagtgatggccaacagtgctcatcttcttggttcagaa
ggtagagagtacaacacagatgagtcattagctggtttagataccaaagaacgtcttgct
agacaacggcaacaagtaaatgctcagctaggtttggatactatggcagttcttggggtg
gatacatcagatattgtgtcagaagaagatatagcatgcgcctccgttctattaccaaag
gctgagtcaaagaaatctatatctgaaatgcttggacaaggaccatgtggaactgaaaat
tttaaacttcgccgtctatcacgtgcaaattctaaactaaatgcacttggcgacttggat
aatactggtgaacctgactgcaagcgtataaaactagaagatagtaatgaaattaatttc
aagtcagaagacttagcacaacttgctatgcctggtaatggtgaaagtgtacctgatggt
acaggcagttggggagataccatagattggccatttgaattcttctgtgatcaattatgt
cgagatctgtttagctctaaatgggaggttcgccatggtgcagccacagctttaagagag
tttgttaaaattcatggtcctggtgcagggaaacaagcaaatgtctcccaaacagagatg
gaagccttacatcagcaatgtcttgaagacattgcacttcgtcttctgtgtgtcttgggc
ttagatagatttggtgactttgtgtcagaccaagttacagctcctgtcagggaaacttgt
gctcaagctttgggcatggttctgcaattgttaccacctgaaggtgtccaatgtacgctg
aaggttttgctccagctcttaaaacatgaagagtggcaagccaggcatggaggactgctt
ggtttaaaatatgttttggcagtacgagaggatttactcggagagcttcttcccctggcg
tacccccacattatggaaggccttgctgaccccgttgatgacgttggtgcagtcgcggcc
tctgctctgattcctgtcgccgaaacagtgataaatctcatgggaaatcaagtggatgga
actattcaacaattatgggacttgcttgaagaacaggatgagttagctgcagcatgtaac
agtttcatgggcttgttggctgctcttcttagtgttcccaaatgtcagactttattaagt
ccactaccattgtctgtcgttgttcctcgtttgtggccatttctgagccataacacatca
tctgttcggcgagcaactcttcaaacactctttacccttactgggtcccaaaatattgat
tggaccctggaagtattgcaggctgcgctgcgacatgtgtttcagatggttttattggag
ccaatcagagagatacaactattggctgaaaaggtgtggatcaatctattacaaaattca
cctttatcccaactgttactggcagcttgcccatatgttacaacatggctttgcctaact
atgcaaccagctaaagtatcctttgacaacagtgttttaattcattgtgtcagagaaagc
tcagaaaagagcaccaggaggacaaaagctttttcatctcttgaatcaaattgtggagga
acagtgccaaagctttacattggtgggggccagacagttcctgcatcaagtcacgatcca
aatgttgttcaagcaagagttattgcatgtaggatgcttggtgcactttcatgctattta
gtccaaaaagcacctggcgttatctacacacctgatgtggagtccccagttgagtgctac
acaagagtcatgcttgttcaccttaattccaaatcggccctacagaggatggttgctgct
ctagttcttatggaatggggaaaacgacacaaccaagtgaagctcaatacagaaggcttg
gctgtaaacaatgaagcgatgccgtgtccagtaaatttatcatcatgtcttcattcatgt
ttgaatgaaagtatttactatgatgaaatagctcacgcctacacaaaacttttgcaagat
gcatgggactttgtagcacttttaaagcattacaagctctctgttcctggatatgatggc
aacaaacaggttttgactctggagcagattcagcagttagtaggaactgtttcggaagaa
ctactttctcagcaaaaattaaagccaaaagtgatggacactttggagcaaagtcgcaaa
aacatacagaaagctgttgctcaaactatgtctgatcaatctgttcttcatatcatgact
caagctgctattgcaaatgcagtaattatgttaaactgcttacctgagaaattgcatcct
gtgtgcaagtcggtgatggaatcaatcaaaagagaagaaaatgacatgttgcaatcactg
tctgctgaatgcctagcttctttgattgatatggccacttcacgaaccccatgtcctgtt
gacaaaatcatcactaacctatgtattttccttcgctctgaccctgaattcaccccacaa
ataaagccctctttagacaataatgctcacaatagtgctcaaaactcagcaaggactgtt
gtagcaggagcagctgctagccacaaattaaacaattttaatggtattcctacgctagtt
aatcaacagaagtcggccgagagagccatttatcgtcggtccaattctactgggcgcggt
cctggtagacctcccattcatgaccttcctcctgaagatctttttcctgctgatgaagag
gctcacaaaagaaatcagattatgaggagaggtgccacatttgccttgaagtctgtgact
gcccattttggcaatgctttacccactaaactcccaaagctgtgggaaatcataacaggg
cagattcaacctaaacctgacactgttccactagatctttcaaaagttgctggtgatcaa
gctgcaaaggaattaatagctgatttgcaagtgcttgaagtcacaagtgatgctcttcaa
agggatttattaccagagattatcagctatttgccccaactttgccaacttttgacccac
acatactctgctgttaggcatatggctgcgcgttgcatcggtgttttagcttccctttcc
tcagctcctgtcatggaacaggtggtgactcgagttttaccacttttgggagttgttcat
aatgacacatatcgtcaaggagccatggaagctatcatgtgcatcattgaaaaattgcaa
actaacatcataccatttgttgttgtgttgatagtacctctcctaggccgtatgagtgac
cacgatcaatctgttcgcatgtgtgcaactcatagctttgccacacttattcagctcatg
cctttagatggcggtgttcctgattcaccagatgtttctagtgaatttgcaaagcacaaa
caggctgagaaacaatttttaggacaattgtttaatcctaaaagtatatcagatttcaaa
attcctgtacctattaatgctcaactgcgttcatatcagcagagtggtgtaaattggtta
gctttcttaaatcagtataaattacatggaattctgtgtgatgatatgggccttggaaag
actttgcaatctatctgcatactagccagtgatcattataaccgtgctgttaattataag
aaaactaggaatgctgatagtgcaccattgcaatccttggtcatatgtcccccaacttta
acaggacattgggtttatgaggtggaaaagtttttaccaaagaaatacctgaatcctctt
cagtatgctgggcctccggttgaaagagaaaaattgaggagcacatttaaatcctacaac
ctaatagtggcatcttatgatattgttcgcaaggatatagacttctttagtgctatcaga
tggaattattgcattcttgacgaagggcaatacatcaaaaatggaaagaccaaggcttct
aaggcaatcaaacaactagttgcaaatcataggcttatattatctggaacaccaattcaa
aataatgttttggagctgtggtctttgtttgacttcctaatgcctggtttccttggcact
gagaagcaattcaatgctcgttacagtcgacctattttggccagccgagaagcgaagagc
tctgccaaggaacaggaggcaagtgttttggctatggaagctttgcatcggcaggtactt
ccattcctgctgcgaagagtgaaggaagatgtccttcatgatttaccaccaaagataaca
caggactattattgtgagttgagtccactgcaacagaggctgtatgaagactttgctcgt
acaccagctcaccagtccttagctgagaccattgcacactctgatgcagcagcaaatgct
ttgcaggcaaacactcacatatttcaggctttgcggtaccttcagaaggtgtgcaaccac
ccaaggcttgttttgggaccctcgcatccagagtatgacaaaattgctgcagagcttcat
ttacaaaaaagtgacctacaagatatccagcatgcagctaaactgccagctctcaggcaa
ttgcttttggattgtggcattggtgctgaaccatcctcagtcacatctggacagccaggc
gatattgccatcaaccagcacagagcccttattttctgtcaacttcaagtcatgcttgac
atagtggaggatgacttgttgaagaagcatatgccaggagtttcatacctacgtttggat
ggaagtgtaccggctacccaaagacaggcagttgtacaacgctttaataaggatccatcc
atagatgttttgcttcttacaacacaagttggtgggctaggtctcaacctcactggtgct
gatacggtaatatttgtggaacatgattggaatccaatgaaagacttgcaagcaatggac
cgtgctcacagaataggccagaagaaggttgtaaatgtttaccgcctcataactaggtct
actttagaagagaagattatggggttgcagaagtttaaaatgcttactgctaacactgta
atcagcagtgaaaatgcaagcatggaaacaatggggactgaccagctgctcgacttattc
tcacttgatggcaaggctaagactcctaatggttcatcaaattccattgcaaatgtggga
ggcctaacgggtggcagtgttcagagcatgctcaacaccctaccggacctgtgggacgcc
aaggaatatgaagaagaatatgatatgaagacatttatgagcacgttgaggaagaactaa
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integrated database retrieval system
