Thrips palmi (melon thrips): 117650025
Help
Entry
117650025 CDS
T08251
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04120
Ubiquitin mediated proteolysis
tpal04137
Mitophagy - animal
tpal04144
Endocytosis
tpal04341
Hedgehog signaling pathway - fly
tpal04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117650025
09130 Environmental Information Processing
09132 Signal transduction
04341 Hedgehog signaling pathway - fly
117650025
04350 TGF-beta signaling pathway
117650025
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117650025
04137 Mitophagy - animal
117650025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpal04131
]
117650025
04121 Ubiquitin system [BR:
tpal04121
]
117650025
03029 Mitochondrial biogenesis [BR:
tpal03029
]
117650025
Enzymes [BR:
tpal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117650025
Membrane trafficking [BR:
tpal04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117650025
Autophagy
Mitophagy
Other mitophagy associated proteins
117650025
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
HECT type E3
117650025
Mitochondrial biogenesis [BR:
tpal03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117650025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117650025
NCBI-ProteinID:
XP_034249170
UniProt:
A0A6P8ZVK4
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MSNPGCSRRNGAMKIRLTLLCARNLARKDLFRLPDPFAKISVDGSGQCFSTETSKATLDP
KWNQHFDLYIGKGDGITISVWNNKKIHKKQGGGFLGCVRILSSTVQRLKDTGYQRLDLCK
ASAEDPEPVKGEIVLSLLSRDGHGGVASGGHNAVVDPLGGLSCPEDLPEGWEEKRTTAGR
LYYVNHHTKTTQWYRPNRPTTQPTSNGSTNGLILAQSESDCSSPVTPATPPGPSGPSSPQ
AALPATPPRSQPSVPGSVPGSAPTSPASPSTPSRDQYNNSTGESTQGVERRSNSSANGNA
RPALSPLNGSPSQSQPANKRRSSRQRASQQHQLLLQHQQQLNGRTHNVGQPGDLPPGYEL
RTTQQGQVYFYHIPTGVSTWHDPRIPRELTSTSSANQTGGAELASIMGVDLGPLPPGWEK
RQTQSGRVYYVDHNNRTTQFTDPRLSSAIIQRLYKRQNQQSQATSQVLPQSTVITNEAVV
DSVPPIGTAADRDNINTTNNNTNASLNNSNNSNSRPAQSLIRTPGDGASDESTATTVPAT
PVIPIPPADPDSEGLPKYKRDLVAKQRILRAELQALQPQSGHCRLEVSRAEIFEESYRLV
MKMRTKDMRKRLMVKFRGEEGLDYGGVAREWLFLLSHEMLNPQYGLFQYSREDNYTLQIN
PDSSVNPEHLSYFHFAGRILGIAVFHGHYIDGGFTTPFYKMLLNKPITLEDIEGVDPELH
RSLTWMLENKITGVIDTTFAVEQNSFGVLKVHELKPGGKDEPVTEDNKGLYVKLYVNYRF
MRGIEQQFLALQKGLLELVPAQLLRPFDERELELVICGLGTIDINDWKANTRLKHCTPDT
PVVRWFWLIVESYSEEMRARLLQFVTGSSRVPLQGFKALQGSTGAAGPRLFTIHVIEAPV
ENLPKAHTCFNRIDIPPYESYQKMNEKLSQAVEETCGFAVE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcctggttgtagccggagaaatggcgctatgaagataagactaacccttctc
tgtgcccggaacttagcaagaaaggatttattccgactacccgatccctttgcaaagatt
agtgttgatggctcaggacaatgttttagcacagaaacctctaaagctacactagaccct
aaatggaaccaacattttgacttatatattggtaaaggagatggtataactataagtgtg
tggaataataagaaaatacacaaaaagcaaggtggtggatttttaggttgtgttcggata
ctgtctagcacagttcaacgtttaaaagatactggttatcaaagacttgacttgtgcaaa
gccagtgccgaggatcctgaaccggtaaaaggagaaattgtgttatccttattatcaagg
gatggtcatggtggggttgccagtggtggccacaatgccgttgttgatccactgggaggg
cttagctgcccagaggacttgcctgagggttgggaggagaaacgaaccactgctggacgc
ctctactatgttaaccatcatacaaaaacaactcagtggtatcgcccgaacaggcccacc
acccaacccacctcaaacggctctaccaatggcttgattcttgctcagtcggaatccgat
tgctcttctcccgtaacccctgctacccctcccgggccttcagggccttcatccccccag
gcagcacttcctgccacaccgccacggtcccagcccagtgtgcctggcagtgtgcctggc
agtgcccccacctcacctgcctcaccttcaacaccctcaagagatcaatataataacagc
actggagaaagcacccaaggagttgaaagaagaagcaactcatcagcaaatgggaatgcc
agaccagctctatcacctctcaacggttcaccctcacaatctcagccagcaaacaaacga
cgatcaagccgccaacgagcttctcaacagcatcaacttttacttcaacatcaacagcag
cttaatggtcgaacgcacaatgtgggacagcccggtgacttgccccctggatatgagctc
cgcactacacagcaaggccaagtctatttctaccacattccaaccggtgttagtacttgg
catgaccctcgaataccccgtgaactaaccagtacaagctcagcaaaccaaacaggagga
gctgaacttgcctcaattatgggtgttgaccttggtcctctaccacctggctgggagaag
cgccaaacccaaagtggtcgtgtttattatgttgatcacaataatcgcacaacacagttt
actgacccaagattgtcatcagcaatcatacagaggctttacaagagacaaaatcagcaa
agccaagctacaagtcaagttttgcctcagtcaactgttattaccaatgaagcagttgtt
gattctgtgcctcctattggtactgcagcagatagagataacatcaatactaccaacaac
aatactaatgcttctttaaacaacagcaacaattctaatagcagacctgctcaaagcctt
attagaacccctggtgatggggccagtgatgagtctactgcaaccactgtaccagcaacc
ccagtcatacctattccacctgctgatccagatagtgaaggattgcccaagtataagagg
gatctagtagcaaagcaacgtattctcagagctgagttacaagctttgcagcctcaaagc
ggtcactgccgtcttgaagtatccagagctgaaatatttgaggagtcctatcgccttgtt
atgaaaatgcgcactaaggacatgcggaagaggttgatggtgaagttccgaggagaagag
ggtctagattatggtggagttgcacgtgaatggctgtttcttctttctcatgagatgcta
aatccacaatacggtttattccaatattcaagagaggacaactacactttgcagataaac
ccagacagtagtgttaatccggaacatctttcatactttcactttgctggacgtattctt
ggtatagcagttttccatggtcactatattgatggtggattcaccacacctttttataaa
atgctgttaaataagcccatcactttggaggacattgaaggagtggacccggaactgcat
agaagtctaacttggatgttggaaaacaagattactggagtaatagacactacatttgct
gttgagcagaacagttttggtgtcctgaaagttcatgaattaaagccaggagggaaggat
gaacctgtcacagaggacaacaaaggcctttatgtcaaactctatgtaaattatcgcttc
atgcgcggaatcgagcagcaatttttggctctccaaaaaggtctcttggaacttgttcca
gctcagctattgcgcccttttgatgaaagagagctggaacttgtcatatgtggccttggg
actatagacattaatgattggaaggccaacaccagactaaagcattgtacaccagacaca
cctgtggtgagatggttctggttaattgttgagtcttacagtgaggaaatgagagccagg
ttactacagtttgtaactggcagttcaagagtgccattacagggtttcaaagctttacaa
ggttctaccggtgctgctggacctcgtctttttaccattcatgtcattgaagctccagtt
gaaaatttgcctaaagctcatacttgtttcaatcggattgacatacccccctatgaatca
tatcagaaaatgaatgagaagctcagccaagctgtcgaagaaacgtgtggatttgccgta
gagtaa
DBGET
integrated database retrieval system
