Thrips palmi (melon thrips): 117650232
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Entry
117650232 CDS
T08251
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117650232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpal03009
]
117650232
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117650232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
eIF2A
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_LRRK2
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
117650232
NCBI-ProteinID:
XP_034249370
UniProt:
A0A6P8ZW89
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MPSGSRVFLQNRALGYVSNHIPLVVRYIQRRKENLIVTCTGKSFHTYACSHFTLLSVCSK
HTSEITCMAADTYLIYTAADNVIYAWRRGTELSHTYKGHEHPVHILLPFGPHLISVDDLS
NLKVWDVKAESSYLELSFDNEVFSISTALHPSTYINKILLGSQQGALQLWNIRTSKLVYS
FLGWNSAVTALEQAPAIDVVGIGLANGQIKLHNLKYNETIVEFSQDWGLVTSLSFRTDGH
PIMASGSLCGQIVFWNLEERKVVTQLHAHSGAVSGLQCLPNEPLMVTSSADNSVKLWIFD
MPDGGARLLRIREGHRAPPSCIRFHGSNGDNILSAGGDSSLRIFSTKTETFNKSLGRASY
NRKLSKSKGASKDPCKMPPIVEFTSESTREKEWDNIAAIHLGLSVVTTWSYDKVKMGDLK
LVPERLKKKHNESRNKLSKVTATCLCLTHCGNFVVVGYSSGHVDRFNIQSGIHRATYGTP
VAHKGPVRGVSTDGLNQIVITGGSDTCVKFWHFKDEGKPAFGKVPVDEAVAFFHAHHESA
MLAVALEDFSIVVVDIDTRNIVRKFVGHKAQLTDATFSPDSRWLVTSAMDCTICLWDVPS
SQLIDCFQVDAACTSLSFSPTGEYLATTHVNQLGLYLWSNRTLYSHISLRPLSSVPESIP
KVELPASSSDELQSSHNDDEPLPLDDDEPEFTSPDQLAEDLITLSLVSNARWQNLLNIDL
VKKRNKPKEAPKAPKAAPFFLPTLPTLQDFEFDISGALNKDEGGSKILDLSAMQSLTAFG
KALNKCSQDNYSPAFSLLKEMGPAAIDVEINSLPPEGGGSIDLMLKFMKMINTGFESNKD
FELAQAYLALFLKVHGDTISQNEELKSYIDVLIEGQQAGWSNLENRLQYNLCVVHALKNI
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaggaagccgagtttttcttcaaaatagggctctgggatatgtcagcaaccat
attcctcttgtggtgcgctacattcagagacgaaaagagaatttgattgtcacttgcaca
ggcaagtcctttcatacatatgcttgttcccatttcactctcctgagtgtttgttccaaa
cacacgtcggagatcacttgcatggcagcggatacttacctcatctacacagctgctgac
aatgtgatttacgcttggcgccggggaactgagttgtcccacacatacaaaggacatgaa
catccagtgcatatccttttgccttttggacctcatttgatatcagttgatgatttgagc
aacttgaaagtttgggacgtcaaagcagaatcatcgtatttggaactttcatttgataat
gaggtattcagcatcagcacagctttgcatcctagcacatacatcaacaagattctcctt
ggaagccaacaaggtgcattacagctgtggaatatacgcacttcaaagcttgtctattcc
tttctcgggtggaattctgctgtgacagctttagaacaggctcctgccattgatgtggtc
ggcataggcctggccaacggccaaataaagctgcacaacttaaaatacaatgagaccatc
gttgagttttctcaggattggggtctggtcacaagtctttcgtttcgtacagatggtcat
ccaattatggcctctggtagtttatgtggtcaaattgtgttttggaatttagaagagaga
aaagtagtgacacaattgcatgcccacagtggagcagtgtcaggcttgcagtgcctgccc
aatgaaccgcttatggttacgtcatcggctgacaactctgtgaaactgtggatttttgac
atgcctgatggtggtgctcgcctgttgaggatcagagaaggtcacagagcccctccatct
tgtattcgtttccatggaagcaatggtgacaatattttaagtgctggtggagattcctca
cttcgaatattttcaactaaaactgaaacctttaacaagagtctaggacgtgcttcttac
aacaggaaattgtcgaagagcaagggcgcttctaaagatccttgcaaaatgcctcctatt
gtagaatttacctcagaaagtacaagagaaaaggagtgggacaatattgctgcaatccat
ttagggcttagtgttgtgaccacatggtcttatgataaagtgaagatgggtgaccttaaa
ttggttcctgaaagactgaagaaaaaacataatgagagcagaaataaacttagcaaagtt
actgccacttgtttgtgtttgacacactgtggcaactttgttgttgtggggtacagctct
ggtcatgtggatcgattcaatattcagtctgggatccatcgagctacttatggaacccca
gtggctcacaaaggacccgtgagaggagtatccactgatggactgaatcaaatagtcata
acaggtggaagtgacacctgtgttaaattctggcactttaaagatgaaggtaaaccagcg
tttgggaaggtacctgttgatgaggctgtagcattcttccatgcccatcatgaaagtgct
atgctggcggtagcactggaagacttttctattgttgttgttgacattgatacaagaaat
attgtcaggaagtttgttgggcataaagcccaattaacggatgccacttttagtcctgac
tctaggtggcttgttacatcagcaatggattgcactatttgcttgtgggatgttccctct
tcgcagctcattgattgtttccaggttgatgctgcttgcacatctctgagtttttctcct
actggtgaatatttagcaaccactcatgtgaaccagcttggtctgtacctctggtccaat
agaactctttactcacatatttcccttagacctctttcttctgtacctgaaagtatacca
aaggttgagctacctgcttcatcttctgatgaactgcagtcatcacataatgatgatgaa
ccactcccattagatgatgatgaaccagagttcacttcacctgatcaacttgctgaagac
cttattactttatcactggtatccaatgcaaggtggcaaaatctgttgaatattgacctc
gttaagaagagaaataagcccaaggaagcacccaaagcacccaaagctgctcctttcttt
ctaccaactttgccaacactacaagattttgaatttgatatttcaggagctcttaacaaa
gatgaagggggctctaagattctggacttaagtgcaatgcagtctctcacggcatttggg
aaagctctcaacaaatgttcccaggataattattcaccggctttctctttactgaaggag
atgggtcctgctgctattgatgttgaaatcaattccttgcctccggagggtggtggatca
attgacctcatgctcaagtttatgaaaatgatcaacactggctttgagtcaaataaggat
tttgaactcgctcaggcctaccttgctctatttctcaaagtacatggagatactatttcc
caaaatgaagaattgaaatcttatattgatgtcctgattgaaggccagcaggcaggatgg
tcaaatttggaaaatagattacagtataatttgtgtgttgttcatgcattgaagaatata
taa
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