Thrips palmi (melon thrips): 117650261
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Entry
117650261 CDS
T08251
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04136
Autophagy - other
tpal04140
Autophagy - animal
tpal04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
117650261
04140 Autophagy - animal
117650261
04136 Autophagy - other
117650261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpal04131
]
117650261
03029 Mitochondrial biogenesis [BR:
tpal03029
]
117650261
Membrane trafficking [BR:
tpal04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
117650261
Others
Specific organelles associated proteins
Auto phagosome
117650261
Mitochondrial biogenesis [BR:
tpal03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117650261
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
DSE1_N
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
eIF2A
NBCH_WD40
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_DCAF4
Tricorn_2nd
CFAP251_N
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_EIPR1
Beta-prop_DCAF12
ASA1
CLIP1
Beta-prop_SCAP
PEP5_VPS11_N
Cytochrom_D1
Beta-prop_LRRK2
Beta-prop_RIG_1st
CCDC89
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
117650261
NCBI-ProteinID:
XP_034249421
UniProt:
A0A6P8ZX91
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MAAPMTPVDGQFWRSTLVLRLQNRNRAESHAFKDLISFHNRLFESSNALRAENLQLSIQN
EKLKSEQNISVEKASGDGGANSSSKSPSHRNEKVQILEQKIFSLQEELTEMHRRKGENAQ
QLVDLNQKLQEKERLLQSKEASLGEYISDNSSLKAEVQMYKSSLKELESLNQIIRDEYNA
NQLALTALEEKLRKTQDENRQLVERLVLYKSRDADRMNEDNENFLSGGSHNPTSSLLQTI
DGLFRKKQAKVQRELEDAAKESRAVSPESTFGERSDLGVNPFFASNVPSKAISKFEAHDQ
EINAVKWSTLERLVATGGADRKVKLWDISKGGQHESRGVLVGSNAAVMSIDFDSTGTLIL
GASNDFATRVWTVADHRLRHTLTGHSGKVMAAKFLEQSKVVTGSHDRTLKIWDLRSRACI
ETKFAGSSCNDLVTGDGSGTTIISGHFDKRIRFWDSRTDASSVNDIVLQGKITSLDLSRD
GKYLLSCVRDDSLKMLDLRMNTIVCSFTADGFKVGCDFTRAAFSPDAHFIAVGAADGAVY
VWNVDSNKVEHILKEHQNAVTAVSWHPYGSFLLSVDRAKTAVVWGDA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcctatgacgcctgttgatggccaattttggcgaagtactttggtccttcga
ttgcaaaacagaaatagagcggagagccacgcgttcaaggatcttatttcttttcataat
cgtctctttgagagctccaatgcacttcgagcagaaaacctgcagctctctattcagaac
gagaaactgaaatccgaacaaaacatttctgttgaaaaagcttctggggatggaggggct
aatagttcaagcaaaagcccttcacatagaaatgaaaaggtgcagatcttggaacagaaa
atttttagtcttcaagaagaactgactgaaatgcatcggaggaagggagagaatgcccag
cagctggttgatctgaaccaaaaactccaggagaaagaaaggcttttgcagtcaaaagaa
gcaagccttggagaatatatttccgataacagttctttgaaagcagaagtgcaaatgtac
aagtctagcttgaaagagctggaaagcctgaatcaaatcatccgtgatgaatataatgca
aaccaactagcactcactgctcttgaggagaagttgcgcaagactcaggatgagaataga
caactagttgagcgccttgttctgtacaaatctagagatgctgatcgaatgaatgaagat
aatgaaaattttctgagtggtgggagccataatccaacctcctctctcttacaaaccatt
gatggtctctttaggaaaaaacaagctaaagttcaaagagagttagaggatgctgcaaag
gagtctcgagcagtgtccccagaaagtacatttggagagcggtctgacttgggtgttaac
ccattctttgcctccaatgttccatcaaaagccatcagcaagtttgaggcccacgaccaa
gaaattaacgcagtaaagtggagcacactggaacgcctggttgctactggcggagcagac
cgcaaagttaaactgtgggacatatccaaagggggccagcacgagagcagaggggttctc
gtcgggagcaacgcggccgtcatgtccatcgacttcgactcgacggggacgctcatcctc
ggggcgtccaacgacttcgccacgcgcgtgtggaccgtcgccgaccatcgactcaggcac
acgctgactggacacagcggtaaggtgatggctgccaagttcctggagcagtccaaggtg
gtcaccggcagccacgaccgaacactcaagatctgggacctgcgaagccgcgcatgtatc
gagaccaagttcgcgggctcgagctgtaacgacctggtgacgggcgacggctccggcacc
accatcatcagcggccacttcgacaagaggatccggttttgggactcgcgaacggatgcc
tcctccgtcaacgacatcgtgctgcagggcaagatcacgtcccttgacctgtccagagat
ggaaagtacctgctgagctgcgtgcgtgacgactccctcaagatgctggacctgaggatg
aacaccatcgtctgctccttcacagctgacggcttcaaggtgggctgtgacttcacccgc
gcggccttcagccccgacgcccacttcatcgcggtgggtgccgcggacggcgccgtctac
gtctggaacgtcgattccaacaaagtggagcacattctgaaggagcaccagaacgcggtg
actgctgtgtcgtggcatccgtacggcagcttcctgctgagcgtggaccgcgccaagact
gccgtcgtgtggggtgatgcctga
DBGET
integrated database retrieval system
