Thrips palmi (melon thrips): 117650297
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Entry
117650297 CDS
T08251
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117650297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpal03009
]
117650297
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117650297
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
DSE1_N
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Utp12
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_WDR19_1st
ASA1
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Beta-prop_ACSF4
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
PAC11
Beta-prop_DCAF12
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
WDR54
TRM82_WD
KNTC1_N
Beta-prop_IP5PC_F
Beta-prop_WDR19_2nd
PROPPIN
Motif
Other DBs
NCBI-GeneID:
117650297
NCBI-ProteinID:
XP_034249502
UniProt:
A0A6P8ZVX2
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MVKMGLTKQYLRYTSAGNFNIIASLSCNAVFVVLQGQEGRFVAVGGCEDVIVWDLRLGEK
ALVIPGEKHEVTFILPSPDKQFLAVGYADGSIRVFELSTTDLVATFSGHRSAINCLAYDE
NGHRLASGSKDTEIIVWDVVAERGLHRLSGHKGIITQVAFLHDRNILVSSSKDTFVKFWD
LDTAHCFKTIVGHRTEVWGLALVKNSKYLVTGSSDSELRMWEIKDGKNSSESTLMARDED
PSDITSDESDVASPIICIKAGSILRAGTGRVVGLTADRDGSVLACFGSDNSLEMFEVRSD
EEAKLKMKKRLKKQQKKQLSNPEEFKDTSEPMETIPELDENSSPSLKDEIIRLPVIKYGG
KVKSTSLAVGRGQELRVASILNNNRLELHSMSLSAKTTPPHSLRVIENQGHHSEVRNVAF
SSDGLAIISGSSEALKIWNRPSLACLRTIKTDYILSACFVPGDRHVLLGMKDGKLLIVDI
AAGDILEEIEAHSKELWSISVLPDKRGCVTGGGDNTVKFWQFELIQSSESKAKVLSVLHT
RSLKLEESVLCVRVSPNSRLLAVALLDSTVKVFYLDTLKFFLSLYGHKLPVTCMDISSDS
TLIVTGSADRNVKIWGLDFGDCHRSLFAHDNTVTGIQFIPDTHQFFSCGKDGRVKQWDAD
SFERIVTIQGHHGEAWGLSVSFNGQYVVSCGSDRVLRMFTRTEEPLVLEDEREQEREEED
NEAVEQSEETTVEGQSALHLPSKKTVGSEKAAEMLLECLEVGAAYAAELDQHNIAVKNTG
KEGVVPPPPAIMVAYNASTPSEFLQEVLARIRPSELEECLLRVPFGSVLQLLPQLITLLE
KPQQPHTEIVCRTALFLVRVHHGPIMSTSSLLPTIRHLHMLAASKIAELRDLVGVNLHGF
LFLQHEIEAREGVILFTEAAAQRKQRGKKRRGPTKRAILTL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagatgggcttaaccaagcagtacctgcgatacacatctgctgggaatttcaat
atcattgccagcctctcctgcaatgccgtttttgtggtattgcaaggccaagaaggcaga
tttgtggcagtgggtgggtgtgaagatgttatagtttgggatcttcgcctcggtgaaaag
gcactggtgattcctggagaaaagcatgaagttaccttcatactcccaagtccggataag
cagttcctagcggttggatatgcagatggctcaatcagagtgtttgagctaagtactact
gatttggtagctacattttcagggcaccgttctgctatcaactgcttggcatatgatgaa
aatggtcatcgccttgcctcaggatctaaagacactgaaatcatagtatgggatgtagta
gctgagcgtggtcttcatcgcctatctggtcacaaaggaattattacccaagtggcattt
cttcatgaccgcaatatccttgtttcttcttctaaagatacatttgttaaattttgggat
cttgatacagcacactgtttcaaaacaattgttggtcatcgaactgaagtgtggggcttg
gctctggtgaagaatagcaagtaccttgtaacaggcagcagtgacagtgaattgcgtatg
tgggagataaaggatggtaaaaacagctcagaatcaacacttatggctagagatgaagac
ccctctgatataactagtgatgagtcagatgttgcgtcaccaattatctgcattaaagct
gggtccatcttacgggctggtacaggccgtgtggttggtctcacagcagacagagatggt
tctgtgttggcttgctttggatctgataatagtctggaaatgtttgaagtaagatctgat
gaagaagctaagctaaagatgaagaagcgcttgaagaaacaacagaaaaagcaattaagt
aatccagaggagtttaaggacacttctgaacccatggaaaccatacccgaattggatgaa
aactcttccccgtctctgaaagatgaaataattaggctgccagtcattaagtatggtgga
aaagtgaagtcaacttctcttgctgtcggtcgtggtcaagagctgagagtggctagtatt
ttgaacaataatagattagaacttcattctatgagtttatcagctaaaaccaccccaccc
cacagtttgagagtaattgaaaatcaaggtcaccactctgaagtcagaaatgtggcattt
agttctgatggtttggccattatttctggcagttcagaagcattaaaaatttggaataga
ccatcattagcatgtttacgaacaatcaaaacagactatattttgtctgcgtgttttgtt
cccggtgacagacatgttcttctaggcatgaaagatggaaaattgcttatagtcgacata
gctgcaggagacatattagaagaaattgaggcccactcaaaagaattgtggtctatttct
gttttacctgacaagcgtggttgtgtgacagggggaggtgacaacacagtaaaattttgg
cagtttgagctcatccaaagttctgaatcaaaggcaaaagtactatcagttcttcataca
cggtctcttaaactagaagagagtgtcctctgtgttagagtcagccccaatagcagactt
cttgctgttgcattacttgattcaacagtcaaagtcttttatctagacacattgaagttc
tttttatccctctatggacacaaacttccagttacttgtatggatatctcttctgattcc
acactaatagtcactggaagtgctgaccgcaatgttaagatttggggcttggactttggt
gactgccatcgttctctatttgcccatgacaatacagtgacaggaatacaattcatccca
gatacgcaccagttcttctcatgtggtaaagatgggcgtgtgaaacaatgggatgcagac
tcgtttgagaggatagttactattcagggtcatcatggtgaggcatggggtttgtctgta
agctttaatggccaatatgtggtgagttgtgggtctgaccgagtcctaaggatgttcact
cgcactgaagaaccccttgttttagaggatgagagggagcaggaacgggaagaagaagac
aatgaggctgtggaacagtctgaggagacgacagtggagggccaaagtgccttgcatctg
ccatccaagaaaacagttggcagtgaaaaggcggcggaaatgctcctagaatgcctcgaa
gtaggtgctgcatatgctgcagaactggaccaacataacatagcagtgaaaaacacgggg
aaagagggagttgttccaccacctcctgccataatggttgcttacaatgcttccacgcct
tcagagtttttgcaagaagttctagccagaataagaccaagtgagctggaagaatgtctt
ctacgtgttccatttggcagtgtcttgcagcttttgccccagctcatcactttacttgaa
aagccccagcaaccacatacagaaatagtgtgtcgaacagctctatttcttgttcgtgtt
catcacgggcctattatgagtacttcttctcttctgcccactattcgccatttgcacatg
ctcgctgcctcaaagatagcagaactacgggatttagttggtgtcaatcttcatggcttc
ttgttccttcaacatgaaattgaagcaagggaaggtgttatattgtttactgaagcagca
gcgcagcgaaagcaacgaggaaaaaagcggcgtggacccaccaaaagagcaattcttaca
ctataa
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integrated database retrieval system