KEGG   Thrips palmi (melon thrips): 117650297
Entry
117650297         CDS       T08251                                 
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    117650297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpal03009]
    117650297
Ribosome biogenesis [BR:tpal03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    117650297
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 DSE1_N NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st Utp12 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_IFT140_1st CFAP251_N Beta-prop_WDR19_1st ASA1 Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_RSE1_2nd Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 PAC11 Beta-prop_DCAF12 Beta-prop_RIG_1st Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N WDR54 TRM82_WD KNTC1_N Beta-prop_IP5PC_F Beta-prop_WDR19_2nd PROPPIN
Other DBs
NCBI-GeneID: 117650297
NCBI-ProteinID: XP_034249502
UniProt: A0A6P8ZVX2
LinkDB
Position
Unknown
AA seq 941 aa
MVKMGLTKQYLRYTSAGNFNIIASLSCNAVFVVLQGQEGRFVAVGGCEDVIVWDLRLGEK
ALVIPGEKHEVTFILPSPDKQFLAVGYADGSIRVFELSTTDLVATFSGHRSAINCLAYDE
NGHRLASGSKDTEIIVWDVVAERGLHRLSGHKGIITQVAFLHDRNILVSSSKDTFVKFWD
LDTAHCFKTIVGHRTEVWGLALVKNSKYLVTGSSDSELRMWEIKDGKNSSESTLMARDED
PSDITSDESDVASPIICIKAGSILRAGTGRVVGLTADRDGSVLACFGSDNSLEMFEVRSD
EEAKLKMKKRLKKQQKKQLSNPEEFKDTSEPMETIPELDENSSPSLKDEIIRLPVIKYGG
KVKSTSLAVGRGQELRVASILNNNRLELHSMSLSAKTTPPHSLRVIENQGHHSEVRNVAF
SSDGLAIISGSSEALKIWNRPSLACLRTIKTDYILSACFVPGDRHVLLGMKDGKLLIVDI
AAGDILEEIEAHSKELWSISVLPDKRGCVTGGGDNTVKFWQFELIQSSESKAKVLSVLHT
RSLKLEESVLCVRVSPNSRLLAVALLDSTVKVFYLDTLKFFLSLYGHKLPVTCMDISSDS
TLIVTGSADRNVKIWGLDFGDCHRSLFAHDNTVTGIQFIPDTHQFFSCGKDGRVKQWDAD
SFERIVTIQGHHGEAWGLSVSFNGQYVVSCGSDRVLRMFTRTEEPLVLEDEREQEREEED
NEAVEQSEETTVEGQSALHLPSKKTVGSEKAAEMLLECLEVGAAYAAELDQHNIAVKNTG
KEGVVPPPPAIMVAYNASTPSEFLQEVLARIRPSELEECLLRVPFGSVLQLLPQLITLLE
KPQQPHTEIVCRTALFLVRVHHGPIMSTSSLLPTIRHLHMLAASKIAELRDLVGVNLHGF
LFLQHEIEAREGVILFTEAAAQRKQRGKKRRGPTKRAILTL
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggtcaagatgggcttaaccaagcagtacctgcgatacacatctgctgggaatttcaat
atcattgccagcctctcctgcaatgccgtttttgtggtattgcaaggccaagaaggcaga
tttgtggcagtgggtgggtgtgaagatgttatagtttgggatcttcgcctcggtgaaaag
gcactggtgattcctggagaaaagcatgaagttaccttcatactcccaagtccggataag
cagttcctagcggttggatatgcagatggctcaatcagagtgtttgagctaagtactact
gatttggtagctacattttcagggcaccgttctgctatcaactgcttggcatatgatgaa
aatggtcatcgccttgcctcaggatctaaagacactgaaatcatagtatgggatgtagta
gctgagcgtggtcttcatcgcctatctggtcacaaaggaattattacccaagtggcattt
cttcatgaccgcaatatccttgtttcttcttctaaagatacatttgttaaattttgggat
cttgatacagcacactgtttcaaaacaattgttggtcatcgaactgaagtgtggggcttg
gctctggtgaagaatagcaagtaccttgtaacaggcagcagtgacagtgaattgcgtatg
tgggagataaaggatggtaaaaacagctcagaatcaacacttatggctagagatgaagac
ccctctgatataactagtgatgagtcagatgttgcgtcaccaattatctgcattaaagct
gggtccatcttacgggctggtacaggccgtgtggttggtctcacagcagacagagatggt
tctgtgttggcttgctttggatctgataatagtctggaaatgtttgaagtaagatctgat
gaagaagctaagctaaagatgaagaagcgcttgaagaaacaacagaaaaagcaattaagt
aatccagaggagtttaaggacacttctgaacccatggaaaccatacccgaattggatgaa
aactcttccccgtctctgaaagatgaaataattaggctgccagtcattaagtatggtgga
aaagtgaagtcaacttctcttgctgtcggtcgtggtcaagagctgagagtggctagtatt
ttgaacaataatagattagaacttcattctatgagtttatcagctaaaaccaccccaccc
cacagtttgagagtaattgaaaatcaaggtcaccactctgaagtcagaaatgtggcattt
agttctgatggtttggccattatttctggcagttcagaagcattaaaaatttggaataga
ccatcattagcatgtttacgaacaatcaaaacagactatattttgtctgcgtgttttgtt
cccggtgacagacatgttcttctaggcatgaaagatggaaaattgcttatagtcgacata
gctgcaggagacatattagaagaaattgaggcccactcaaaagaattgtggtctatttct
gttttacctgacaagcgtggttgtgtgacagggggaggtgacaacacagtaaaattttgg
cagtttgagctcatccaaagttctgaatcaaaggcaaaagtactatcagttcttcataca
cggtctcttaaactagaagagagtgtcctctgtgttagagtcagccccaatagcagactt
cttgctgttgcattacttgattcaacagtcaaagtcttttatctagacacattgaagttc
tttttatccctctatggacacaaacttccagttacttgtatggatatctcttctgattcc
acactaatagtcactggaagtgctgaccgcaatgttaagatttggggcttggactttggt
gactgccatcgttctctatttgcccatgacaatacagtgacaggaatacaattcatccca
gatacgcaccagttcttctcatgtggtaaagatgggcgtgtgaaacaatgggatgcagac
tcgtttgagaggatagttactattcagggtcatcatggtgaggcatggggtttgtctgta
agctttaatggccaatatgtggtgagttgtgggtctgaccgagtcctaaggatgttcact
cgcactgaagaaccccttgttttagaggatgagagggagcaggaacgggaagaagaagac
aatgaggctgtggaacagtctgaggagacgacagtggagggccaaagtgccttgcatctg
ccatccaagaaaacagttggcagtgaaaaggcggcggaaatgctcctagaatgcctcgaa
gtaggtgctgcatatgctgcagaactggaccaacataacatagcagtgaaaaacacgggg
aaagagggagttgttccaccacctcctgccataatggttgcttacaatgcttccacgcct
tcagagtttttgcaagaagttctagccagaataagaccaagtgagctggaagaatgtctt
ctacgtgttccatttggcagtgtcttgcagcttttgccccagctcatcactttacttgaa
aagccccagcaaccacatacagaaatagtgtgtcgaacagctctatttcttgttcgtgtt
catcacgggcctattatgagtacttcttctcttctgcccactattcgccatttgcacatg
ctcgctgcctcaaagatagcagaactacgggatttagttggtgtcaatcttcatggcttc
ttgttccttcaacatgaaattgaagcaagggaaggtgttatattgtttactgaagcagca
gcgcagcgaaagcaacgaggaaaaaagcggcgtggacccaccaaaagagcaattcttaca
ctataa

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