Thrips palmi (melon thrips): 117650345
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Entry
117650345 CDS
T08251
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117650345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpal03009
]
117650345
03016 Transfer RNA biogenesis [BR:
tpal03016
]
117650345
03029 Mitochondrial biogenesis [BR:
tpal03029
]
117650345
Enzymes [BR:
tpal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
117650345
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
117650345
Transfer RNA biogenesis [BR:
tpal03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
117650345
Mitochondrial biogenesis [BR:
tpal03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
117650345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Glutaredoxin
CaM_binding
Motif
Other DBs
NCBI-GeneID:
117650345
NCBI-ProteinID:
XP_034249599
UniProt:
A0A6P8ZWT1
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MASKPQFDSRLGGDMEVPIEVNTLKFASARAQEIAALSQALDEAKTGNLIFQRLPRHMRR
RVMSYNVKRMPKGLRAAYSQQLLKNSGGPVTKHKTPSRKHRRRPSNLLDEYNRRQRSSTW
LETHIWHAKRFHMTERWGYRLAHFPNDRSYRACYRAAANHCLLQDISFLCCIELIGPFHT
LVSGLSRHTSSSCGLTFAAVSLTGGCREGEIMFYEDGKYPYKPIGTLLFFWKPNDTPTSD
ERSLWLWAHPSFYQHVISALTSTFHLHIVTSKDLMPVTENEISQSEESTRPLKRMRIQTE
DKKPKNVEEIKLATRNVPFERTPKYISSCGSVQMILLKDTLNRFRLTGPLSQAVLREALQ
LVNDDTPHCDKTMSTVLDPDKDGESHHNFWHSISNVSSPAELPPKIILSLLVKDPRLQIP
DKRTKAVAQTSAQDAPCSPPPSNSSRIWSSHVRDTTTQSKLSTAELNKLRSKSLVPGLLR
ISDENEESIGNANISTSLATSVKTEIPLILIQRPGSKNPMEKRLGFGCGWDVILPAGWAM
PFWLAFVFRSARPAGLREASSHELERGKCEFLPPDSIAGTEEACRTGKELREKYFRLPPD
KRPNYIKLGVACPFQCQWGHLIRDWSASQDQPVQHLFESCSSYFVCRDFKKLEEIHNFIM
ETWSTLTKKLPDLNNGTVLGNHLSHFPTFPNQDQALLTVRVEALHRGLTDDLSLICIPSS
EDVVNLLKDLKIEPIEPSNVDKNHEVRQKMRKDHKSELVRLRRQRVRSKRNAENAISDQD
ITRSVAAKAIPHKSKLSPTQDLVSAYNKKMEELWLLNTNSLGSIRNSCSREVAGFVQKGD
FCFTEARGCGVGYITYSSLQCMMMLWVKSVPPYPPSSFKSRGIPVLIRSPQSYQYRLAKL
SLVIN
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaaaccgcaatttgattctcgcctgggtggcgacatggaagtcccgattgaa
gtgaatacattgaaatttgcttcagcccgagctcaagaaatagctgctttaagtcaagct
ttggatgaagcgaagacagggaatctaattttccagcggttacctcgtcacatgcgtcga
cgtgtaatgagttataatgtcaaacgtatgcccaaaggcctgagagcagcatattctcaa
cagcttttaaagaactcaggtgggcctgtgactaagcacaagactccaagcaggaaacat
agaaggaggccttcaaatttgcttgatgagtataataggcgtcaacggtcctcaacctgg
ctagaaactcatatatggcatgctaaaaggtttcatatgaccgagcgttggggatatcgc
cttgcacattttccaaatgaccgcagttacagagcatgttatagggcagctgccaatcac
tgccttcttcaagatatttcattcctttgttgcattgagctgattggaccattccatact
cttgtgtctggactttcaagacacaccagttcaagttgtggtttgacatttgctgctgtg
tcacttactggtggttgcagggaaggagagataatgttttatgaagatggaaaatatcct
tacaagcccattgggactctattgttcttttggaaaccaaacgacacacccacctcagat
gagcggagtctgtggttgtgggctcatccctcattttatcaacatgtaatcagtgcttta
acttctaccttccatctgcacatcgtaacttcaaaggatttgatgcctgtaacagaaaat
gaaatttcacaaagtgaagagtctacacgaccacttaaacggatgaggatccagactgaa
gataaaaagccaaaaaatgttgaagaaattaagcttgccacccgaaatgttccttttgaa
aggactccaaaatacataagttcatgtggaagtgttcaaatgattctcttaaaagataca
ctcaaccggtttcgattgacagggccactgtcccaggcagttttacgagaagctttacag
cttgtaaatgatgatacgcctcactgtgataaaaccatgtccacagttcttgaccctgac
aaggatggagaaagtcaccacaacttttggcactctatttcaaatgtatcctcccctgct
gagttgccacccaagattattctctcattattggtcaaggacccaagacttcaaattcct
gacaagaggaccaaggcagttgcccaaacttcagctcaagatgctccctgttctcctcct
ccttctaattctagtcgcatttggtcttcccatgtccgagacaccactactcaatccaaa
ctttcgactgcagaactgaataagttgaggtcaaaaagtcttgttcccggtcttttgcga
atttctgatgaaaacgaagaatcgataggaaatgccaacattagtaccagcctcgcaacc
tcagtaaaaactgaaattcctttgattctcattcagagacctggcagcaaaaaccccatg
gaaaagcgattagggtttggatgtggttgggatgtgattttgccagctggctgggctatg
ccattttggttagcttttgttttccgtagtgcaagaccggcaggcttgcgagaagcttcc
tctcatgaattagagagaggaaaatgtgagttcttgcctcctgattccattgcgggaaca
gaagaagcatgccggacaggaaaggagttgagggaaaagtactttagattgcctccagat
aaaagaccaaactacattaaattgggtgtagcgtgtcccttccagtgtcagtggggccat
ttaattagggattggtctgcttcccaggatcagccagttcaacatctgtttgagtcatgt
tcatcttactttgtgtgcagagatttcaaaaagctagaagaaatacataattttatcatg
gaaacatggtcaactttgacaaagaagttgcctgatttgaataatggaactgtattggga
aaccatttgtcccatttcccgactttcccaaaccaagaccaagctctgttaacagttcgt
gttgaagcattgcacaggggattaacagatgacttatctctgatttgtattccatcatct
gaagatgtagttaatttactgaaggatttgaagatagagccaatagaaccatcaaacgtt
gacaaaaatcatgaagtaagacaaaaaatgaggaaagaccataaaagtgagctggtacgc
ttacgtaggcaaagagttcgctctaaaagaaatgcagagaatgcgattagtgatcaggac
attaccaggagtgttgctgccaaagcaattccccacaagtcgaagctttctccaactcag
gatctggtatctgcatacaacaagaaaatggaggaactttggttacttaacaccaattct
cttggctccatcagaaactcatgcagtagggaagttgccgggtttgtgcagaaaggtgat
ttttgcttcacagaagcaagaggttgtggtgtgggatatatcacttactcctctctacag
tgtatgatgatgctctgggtcaagtctgtccccccttacccaccctcatcttttaaaagt
agaggtatcccagtcctcatacgctctcctcaaagttatcagtaccgactggcaaaatta
agtcttgtcattaattaa
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