Thrips palmi (melon thrips): 117650358
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Entry
117650358 CDS
T08251
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04137
Mitophagy - animal
tpal04140
Autophagy - animal
tpal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117650358
04137 Mitophagy - animal
117650358
04148 Efferocytosis
117650358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpal03000
]
117650358
Transcription factors [BR:
tpal03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117650358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS
PAS_3
PAS_11
PAS_9
PAS_4
HIF-1a_CTAD
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
117650358
NCBI-ProteinID:
XP_034249619
UniProt:
A0A6P8ZWU9
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MDNAGDLNLPAWITEWVDSVVEGNAPPQRASAATNATNAKHCGSAESVPHDEFENTEKRK
EKSRDAARCRRSREMEIFSDLSDALPLPASAVAHLDKASVMRLAICYLKVRSLIHMVPEQ
VTPKCEVASDPLAMSAMEGFLLVLSADGDMVFLSENVQDYLGVNQLEMMGHSIYEFSHPC
DHDEIKEILSEKSVANGDQRSVVPRSSFLRMKCTLTSKGRNVNLKSASYKVIHYTGHMLT
GPTVPRAVCHDSDSEGGSTDGAPGCGGCELVPQKCLVAIGEPIPHPSNIEIPLDKQTFLS
KHSLDMKFTYADDKIGEFLGYDPAELVGKSMYEFHHAMDSAVVEKGFKCLFSKGQCQTGR
FRFLACGGGYVWVVTQATLLYASKGEAKGHKPQSVVCVHFVTSGIEERDEIFASSQLSCV
PAAVQAAPSAAPVPAQAAKAVGVPAAEPKAAAKAAAKAEAPAAPSAPRVQSVTATLFKSV
PAEPQVAVPAVPEVVVLPPASPTPPLPPPPSVDISVNQYIRPDIFSLSPTFSSSLSPALS
PALSDGPLLRPTSATSSIFAASPAPSSPTPSSSTPSSPSVYLRPQAATASIFAPRTEDMN
KGFLMFSEDEGLTMLKDEPEDLTHLAPTAGDVCVPLEGPYLGDMFEDFMLSDSDNYCPLL
GDVGDDNSNSKFFLYRDSDSDPSPGELSPSRHSRLLLSPTLSPTLSSALSESPGECSLPS
LCSPSRAVDLDDNMTSFMSLSVDTGMTSLSDTDDDLSLRAPYIPMGEDLPLIMSNDLMWG
SSLPYKSSCSSSRSSTSGSSSSRSPDDSGGGDNSNSGASSPFDSSHSCWSPQPQTSSKPD
MNSSLARLLQSNTSSHNNQRQSASDLVDPCEVLGQIYSKKQSSAWSGARGAGRPVAGASY
AHKRGASGLGQYIGAKRGRLNVAVNRSKKARSDVHTSDSVLVLDGARAEHKPVPLPQPSD
SVLMNLLGQDGMFKIPIQKKDAVVALGNLVASASSILRELAGDKIPDDAPIVLQPAKPPE
SGSSSNTSFRPVPMGRELLRKNSFSLLDPDGMIPSLADLSQQDYDVNAPVSSQGSLLQGE
ELLTALEMSGAGNILSMG
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggataacgctggtgacctgaacctgccggcctggatcacggagtgggtggacagtgtg
gtggagggcaacgcgccgccccagcgggcgagcgccgccacgaacgccacgaacgccaag
cactgcggcagcgcggagagcgtcccccatgacgagtttgagaacacggagaagcgcaag
gagaagtcacgggatgcggcgcgctgccgccgcagccgtgagatggagatcttctcggac
ctgagcgacgcgctgccgctgcccgcctcggccgtggcgcacctggacaaggcctccgtc
atgcgcctcgccatctgctacctcaaagtgcgcagcctcatccacatggtgccggagcag
gtgacgcccaagtgcgaggtggccagcgacccgctcgccatgagcgccatggagggcttc
ctgctcgtgctgtccgccgacggcgacatggtgttcctgtccgagaacgtccaggactac
ctcggcgtcaaccagctggagatgatgggccacagcatctacgagttcagccacccctgc
gaccacgacgagatcaaggagatcctgtcggagaagtccgtcgcgaacggcgaccagcgc
tccgtggtgccgcgctcgtccttcctcaggatgaagtgcaccctcaccagcaagggccgg
aacgtgaacctcaagtcggccagctacaaggtgatccactacactggccacatgctgacg
ggcccgaccgtgcccagggcggtgtgccacgacagcgactcggagggcggctcgaccgac
ggcgcgccgggctgcggcggctgcgagctggtgccccagaagtgcctggtggccatcggg
gagcccatcccgcacccgtccaacatcgagatccccctggacaagcagacgttcctcagc
aagcacagcctcgacatgaagttcacctacgccgacgacaagatcggcgagttcctgggc
tacgaccccgccgagctggttgggaagtccatgtacgagttccaccacgccatggacagc
gccgtcgtggagaagggcttcaagtgcttgttctccaaggggcagtgccagacgggccgc
ttccgcttcctggcgtgcggcggcggctacgtgtgggtggtgacgcaggccacgctgctg
tacgcgtccaagggcgaggccaagggccacaagccgcagtccgtggtgtgcgtgcacttc
gtcaccagtggcatcgaggagcgcgatgagatcttcgccagcagccagctgagctgcgtc
cccgcagcggtgcaggcggccccctccgccgcgccagtgcccgcccaggccgccaaggcc
gtcggcgtgcccgcggcagagcccaaggccgccgccaaggccgccgccaaggccgaggca
cccgccgcgccgtcggccccgcgcgtccagtccgtgacggccaccctgttcaagtcggtg
ccggccgagccccaggtcgccgtgccggccgtgcccgaggtggtggtgctgccccccgcc
agccccacgccgccgctgccgccgccgccctcggtggacatcagcgtcaaccagtacatc
cggcccgacatcttctccctctctcccaccttctcgtcgtccctctcgcccgccctctcc
cccgcgctctcggacgggccgctgctgcgccccacctcggccaccagcagcatcttcgcg
gcgtccccggcgccctcctcgccgacgccgtcctcgagcacgccgtcgtcgccgtccgtg
tacctgcgcccgcaggccgccaccgcctcgatcttcgcgccgcgcaccgaggacatgaac
aagggcttcctcatgttctccgaggacgaggggctcaccatgctcaaggacgagccggag
gacctgacgcacctggcgcccaccgccggcgacgtgtgcgtgccgctggaggggccgtac
ctgggcgacatgttcgaggacttcatgctgtccgacagcgacaactactgccccctgctg
ggcgacgtcggcgacgacaacagcaactccaagttcttcttgtacagagacagcgacagc
gacccctcgcccggcgagctgtcgccgtccaggcactcgcgcctcttgctctcgcccaca
ctgtcacccactctctcttcagctctctcagagagtcccggagagtgcagtctaccttcc
ctgtgcagtccaagccgggcagtggatctggacgacaacatgacctctttcatgtcgctg
tcagtggacactggcatgaccagcttgtccgacacagatgatgatctgagtttacgagca
ccttacatacccatgggggaagacctacctctcattatgtcgaatgacctcatgtggggg
tcttcgttaccttacaaaagcagctgcagtagtagcagaagcagcacgagtgggagcagt
agtagcagaagtcctgatgacagtggtggaggcgacaacagcaacagtggtgccagcagc
cctttcgacagttctcatagctgctggtctcctcagccacagacatcgagcaaaccagat
atgaattcaagtctagcaagacttttacagtctaatacatcatctcataataatcagcga
cagtcagcatctgatctggtcgatccgtgtgaggtgttgggtcagatatattctaaaaaa
caatcctcagcatggagcggtgcgcgcggagcaggccgccctgttgcaggggcttcttac
gcccacaagaggggagcgagtggcttggggcagtacattggagccaagcgaggccggtta
aatgtggctgtgaatcgttccaagaaagcacgatcagatgtgcatacttcagactcagta
ttggtgttggatggtgcgcgggctgagcacaaaccagttcccttacctcaacccagcgac
agtgttctcatgaacctcttgggccaggacggtatgtttaagataccaattcagaagaaa
gacgctgttgttgctctaggtaacctagttgcatctgcatcatctattctccgtgagctt
gctggtgacaagatcccagatgatgccccaatcgtcttgcagccagcaaagccaccagaa
tctggatcgtcaagtaatacttcgtttaggcctgtgcctatggggagggagctgcttcgt
aaaaattcattctcactgctggatcccgatggcatgataccatctcttgctgatctcagc
caacaagattatgatgtgaatgcccctgtgtccagccaaggtagtcttctgcaaggggag
gaattgctgacagcattagaaatgtctggtgctggcaatattttgtcaatgggatag
DBGET
integrated database retrieval system
