Thrips palmi (melon thrips): 117650468
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Entry
117650468 CDS
T08251
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03420
Nucleotide excision repair
tpal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117650468
09124 Replication and repair
03420 Nucleotide excision repair
117650468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpal04121
]
117650468
03400 DNA repair and recombination proteins [BR:
tpal03400
]
117650468
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
117650468
DNA repair and recombination proteins [BR:
tpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117650468
TCR (transcription coupled repair) factors
Cul4-CSA complex
117650468
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Lgl_C
Motif
Other DBs
NCBI-GeneID:
117650468
NCBI-ProteinID:
XP_034249816
UniProt:
A0A6P8ZYC5
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MPFHSSSKLSLDETVKKMSRNMAHHYVVTAHKPTAVTACVTGNFTSPDDLNLILAKNTRL
EIYLVTPEGLRPLKEIGLYGKVAVMKLFRPPQEKKDLLFIVTKRYNAMILECQGDTDNFE
IITKAHGNVSDRIGKPSETGIIAVIDPEARVIGLRLYDGLLKIIPLDRDNSELKASSIRM
EELSVQDLAFLHGCQNPTIILIYQDLHGRHIKTHEISLKDKEFVKVPWKQDNVETDAAMV
IPVPEPLCGAIVIGQELILYHNGNTSIAVAPPIIKQSTIICYAQVDSNGSRYLLGDMAGR
LFMLLLEKEERMDGSFTIKEPKVELLGEISIPEAITYLDNGVLFIGSRIGDSQLIKLNKT
PDENGSYVSVMETFTNLAPIRDMVVVDLERQGQGQLVTCSGSFKEGSLRIIRNGIGIQEH
ASIDLPGIKGMWALRTSADSRFDNTLVLAFVGQTRVLTLSGEEVEETEIPGFLSDQQSFY
CGNVDHDQIIQVTPTSARLLSVATKQLVCEWKQPSEKSISVVACNTAQVICATGSDLFYL
EIREGGLVQKGHVTLEHEVACLDITPLQEGAKTASIVAVGLWTDITARILRLPNLEEINR
ESLGGEIIPRSILMTCFEGSNYLLCALGDGAMFYFSLSKTGILTEKKKVTLGTQPTVLRT
FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNSESYPDSLALATDSTVT
IGTIDEIQKLHIRSVPLGESARRIAYQESSQTFGVITMRMDVQDSGGVQPARPSASTQTQ
STSVSSSLCKSGNVGPVAMSTDHGQEVEVHNLLIIDQHTFEVLHAHQFMQSEYAMSLMSC
KLGDDPTTYYVVGTALINPEESEPKQGRIVIFQYQDNKLLQIHEKDIKGACYSLVEFNGK
LLASINSTVRLFEWTAEKELRLECTHFNNIIALFLKTKGDFLLIGDLMRSMTLLQYKTME
GSFEEMARDYNPNWMTSIEILDDDTFLGAENFMNLFVCQKDSAATTDEERQQMQAVGQFH
LGDMVNVFRHGSLVMQHVGETSTPTQGCVLFGTVSGAIGLVTQIPADFYDFLHEVEERLT
HVIKSVGKIEHVFWRSFNTEIKTEPCEGFIDGDLVESFLDLSLDKMKEVVAGVQVDNGSG
MKHDATVEDLVKIVEDLTRIH
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccacagcagttccaaactctccctagatgaaacggtgaaaaagatgagccga
aacatggcccaccattatgttgtgacggctcacaaacccaccgctgttacagcgtgtgta
accggtaactttacatctcctgacgatttgaaccttatccttgccaaaaacacacggcta
gaaatttaccttgttacacctgaagggcttagacccctcaaggaaattgggttgtatggc
aaagttgctgttatgaaattgtttcgaccacctcaagagaaaaaggatcttctatttatt
gtaaccaaacgttacaatgcaatgattttggagtgccaaggagatactgataactttgaa
ataatcactaaagctcatggcaatgtgtctgaccgcatcggcaagccatcagagacaggc
attattgctgtaattgacccagaagccagagtcattggcctcagactgtatgatgggctc
ctgaaaatcatccctcttgatagagataacagcgaattgaaggcatcatccataagaatg
gaggaactgagtgttcaggatttagcatttctacatgggtgtcagaatcccactatcatt
ttaatctatcaagatcttcatggaagacacatcaaaacacacgaaatatctctaaaagac
aaagaatttgtgaaggttccatggaagcaagataatgtagaaacagatgcagccatggta
attcctgtcccagaacctctttgtggtgctattgtcattggccaagaattaattttgtac
cacaatggcaatacatcaattgccgttgcacctccaatcatcaagcaaagcaccattata
tgttatgcccaagttgactcaaatggatcacgatatttgttaggggatatggcgggacgc
ctattcatgttgcttcttgaaaaggaagaaagaatggatggaagtttcaccattaaagaa
ccaaaagttgagctcttgggagaaatcagcattcctgaggcaataacgtacttggataat
ggtgttctgttcattggttcacgcattggtgattctcaactcatcaaactgaacaaaacc
cccgatgaaaatggttcttatgttagtgtgatggaaacattcactaatcttgcacctatt
cgtgacatggtggtggttgatttggagagacagggtcagggacaactagtcacctgctca
ggatcatttaaagaaggatctctacgaattatcagaaatggtattggtatccaggaacat
gcatccatagatttaccaggtattaaaggaatgtgggcattgaggacatctgctgacagc
cgatttgacaacacattggttttggcatttgtgggccaaactagggttttgacactatca
ggtgaagaagtagaagaaaccgaaattcctggttttttgtccgatcagcaatcattttac
tgtgggaatgtggatcatgatcaaataattcaagttacacctacatctgcgcggcttctt
tctgttgcaaccaaacagcttgtgtgtgaatggaaacaaccatctgaaaagagcattagt
gttgtggcatgtaatactgcacaagtcatatgtgccacaggaagtgacctgttctacctt
gaaattcgtgagggtggtttggtccagaaagggcatgtcacgctagaacatgaagtagca
tgtttggacatcactccattgcaagaaggtgctaaaacagccagtatagtggctgtaggt
ctttggactgatatcactgctcgtattcttcgattaccaaatttagaagaaatcaacaga
gaaagtcttggtggagagattattccaaggtctattctgatgacatgttttgaggggagc
aattaccttttatgcgccctaggtgatggtgctatgttctatttctcattgagtaaaacg
ggcattctgacagaaaagaagaaagtcacacttggcacacaacctactgttctacggacc
ttccgctcattgtcgaccaccaatgtttttgcttgctcagacaggcccacagtgatttac
tcttctaatcacaagcttgttttctcgaatgttaatcttaaagaggtcaatcatatgtgt
tctctcaattcagaatcatacccggacagcttggctttggcaactgatagcactgttacc
attggtaccatagatgaaattcaaaagctacacattcgatctgtgccattgggtgaatct
gcaaggagaatagcttatcaagaaagttcacagacttttggagtaataacaatgaggatg
gatgtgcaggatagtggtggtgtacaaccggcacgcccaagtgcgtccacacagactcaa
agcacatccgtgagctcatccctctgcaaaagtggtaatgtgggtcctgtagctatgtca
acagaccatggccaggaggtggaagttcacaaccttttgatcattgatcaacatacattt
gaagtgcttcatgctcaccaattcatgcagtctgagtatgcaatgtctctcatgtcatgc
aaattgggagatgacccaacaacatattatgtcgttggaactgcattgattaatccagaa
gaaagtgagcctaagcagggtagaattgttattttccaatatcaagataataaactcttg
caaatccatgagaaagacataaagggtgcttgctattcgttggtagagtttaatggaaag
ttgttagcaagcatcaatagtactgttcgattgttcgaatggactgctgagaaagaacta
agactggaatgtacgcacttcaacaatatcattgctctattcctaaaaaccaaaggagac
tttctgttaatcggcgatctcatgcgatccatgacgcttcttcagtataaaactatggag
ggcagttttgaggagatggctagagattacaatcccaattggatgacatctattgagata
ctagacgatgacacatttttgggtgcagaaaactttatgaatttgtttgtgtgtcagaag
gacagtgctgccaccactgacgaagaaagacagcagatgcaagcagttggtcagttccac
ctcggtgatatggtgaacgtttttcgacatggatcactggtgatgcaacatgtgggtgag
acttctactccaactcaaggatgtgttctgtttggtaccgtcagtggagcaataggcttg
gttactcaaattcctgcagatttttatgattttttgcatgaagttgaagaaagactcacc
catgtgattaaatctgtgggtaaaattgaacatgtcttttggcgcagttttaacacagag
attaaaactgagccctgtgaaggatttattgatggagaccttgtggaaagtttccttgac
ctgagtctagataaaatgaaagaagtggtggcaggtgtacaggttgataatggctctggc
atgaagcatgatgccactgtggaagacttggtgaaaattgttgaggacctgacacgaata
cattag
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integrated database retrieval system