Thrips palmi (melon thrips): 117650476
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Entry
117650476 CDS
T08251
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117650476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpal03021
]
117650476
03036 Chromosome and associated proteins [BR:
tpal03036
]
117650476
Transcription machinery [BR:
tpal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117650476
Coactivators
SAGA/TFTC/STAGA complex
117650476
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117650476
STAGA complex
117650476
TFTC complex
117650476
SAGA complex
117650476
SLIK complex
117650476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
NBCH_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_like
Beta-prop_IFT140_1st
RMC1_N
Mala_s_1-like
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
PROPPIN
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
117650476
NCBI-ProteinID:
XP_034249825
UniProt:
A0A6P8ZXJ6
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MNKKRTKAEIPYKRSKNELVKATLGSYLKRRNYTLSETIKNSNCENHVFQNHDFGQKLEI
PILFNREQIALATAIDNDVTRNNSILYSCINSDTLQVDQQFTKFKTWVNDLAAADCRSEL
TCLIIPLFCHIYLEMLQGGNRQSAPKFLKRYQHLLASENSTVGRISEILDELSVVTCTQD
INTRPLLKAFRSCKYHCQLSARSLACLKKYLTVQGHVVLFQALQTWFELEVPTTSTMVTR
LEEDDDKTDLRDQKNFKMDNIFTTSKRNFPMKNGPITPDEQLCQLQEAVRLLEDEPTKVI
PIMLYTIVNTDLNVTCARLSQSQRVLVAGCMSSEVRVYPIPGSRSLGYECPIINNPTAHI
NIACNKVLPPRKIQQIGFEDSNYEPLRGHSDIVHDVAFVPEADTVISVSADCTMRAWDMQ
DFSNAAIYRGHNYPIYSVDVSAWSVYLATASHDRTARLWSLDRTFCLRIFAGHQQEVNVV
KFHPNGSYLATASADKTVRLWSIVDGKMVRVFPGHKGSVHALAFSDNGKYIASAGDDKRV
KIWDLAEGTVVADLKGHSDSVVGLHWVPGCDGIASFSTDGVVRTWGLNTTLGTDSYSNDV
LECDTGCSHLLNLQYSQRNSVTCIGCL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaagaggacgaaggcagaaattccttataaacgctcgaaaaacgaattggtt
aaggcaactcttggatcttatttgaaacgccgtaattatactctatctgaaacaataaaa
aactcaaattgtgaaaaccacgtatttcaaaatcacgactttgggcagaaactagaaatt
cctattctattcaatagggagcagattgcccttgcaactgccatagacaatgatgtaact
aggaataactcaatactttatagctgcatcaatagtgatactctacaagtagatcaacag
tttaccaaattcaaaacatgggttaatgacttagctgccgcagattgtcgttcggagtta
acatgcttgattatacctttattttgtcatatatatctggagatgttgcaaggtggcaat
cgacagtctgcacccaagtttcttaagcgatatcaacatttattagcctctgaaaattct
acggttgggagaatatctgaaattttagatgaattatctgttgtaacttgcacacaggat
atcaatacaaggccattattaaaggcatttcgctcgtgtaaataccactgtcaattatcc
gccagaagtttggcctgcttaaagaagtacctaactgtgcagggccacgtagtactgttc
caagctctccagacatggttcgaacttgaggtaccaacaacatcaaccatggttactcga
ttagaggaggatgatgataagactgacttaagagaccagaagaacttcaagatggataat
atttttaccacttccaaacggaattttccaatgaaaaatggtccgattaccccagatgaa
caactatgccaactgcaagaagctgtgcgattgttggaagacgaacccacaaaagttatc
ccaataatgttgtacactattgtcaacacagacttaaatgttacatgtgcaagactgtca
cagtctcaaagagtgttagttgctgggtgcatgtcatcagaagtaagagtttacccaata
cctggaagtcgaagtcttggatatgagtgtcccataattaacaatcccactgcacacatc
aatattgcctgtaataaagtcttacctcctcggaaaatccagcaaattggatttgaggac
tcaaattatgaacctttgcgaggccatagtgatattgtacatgacgtggcttttgtgcct
gaagcagatactgttatatctgtgtctgctgattgcaccatgagagcatgggatatgcag
gacttctcaaatgcagccatatacaggggacataattaccctatttacagtgtagatgta
agtgcctggagtgtgtacttagcgaccgcctctcatgatcggacagctcgactttggtct
ctagataggacattttgcttgcgtatatttgctggacatcaacaggaagtaaatgttgtg
aagttccacccaaatggaagctacttagcaactgcctcagcagataagactgttagactg
tggtccattgttgatgggaaaatggtgagggtgtttccaggtcacaagggaagtgtgcac
gccttggcattcagtgataatggaaagtacattgcctctgctggagatgataaaagggta
aaaatatgggatcttgcagaaggaactgtggttgctgacttaaaagggcattcagattct
gtagtgggattacattgggttcctggctgtgatggtattgcctcatttagtactgatgga
gtagtccgaacttgggggttgaatacaacattaggaactgactcatacagcaatgatgtc
cttgagtgtgatactggctgctctcacctgctcaatcttcaatatagtcaacgcaacagt
gtaacatgcataggttgtctttga
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integrated database retrieval system
