Thrips palmi (melon thrips): 117650565
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Entry
117650565 CDS
T08251
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03430
Mismatch repair
tpal03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117650565
03460 Fanconi anemia pathway
117650565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpal03400
]
117650565
DNA repair and recombination proteins [BR:
tpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117650565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
ExsD
Motif
Other DBs
NCBI-GeneID:
117650565
NCBI-ProteinID:
XP_034249973
UniProt:
A0A6P8ZX47
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MSVEEGSTAVPSPTKEKSKSIQAIDKEAVHRICSGQVVLNLATAMKELVENSLDAGATSV
EIRLKEYGSELVEVIDNGCGVEEANFPGLTLKHHTSKIREFSDLLGVETFGFRGEALSSL
CALSDLTVTTRHTSSTMGTRLTYDSRGSIINRTPCARQIGTTVTLANLFSPLPVRQKEFL
RHLKREFAKMTQLLYAYCLISTGVKILCSNQTKKGGKNIIASTQGSASFKGNIMCIFGAK
QASSLLDIELEPPSASHLEEIGLPGNIDDFRGFQLEGCVSSCSHGQGRSSTDRQFYFINN
RPCDPVKVAKVVNEVYHQFNLHQFPFIFLNIKTARDSVDINVTPDKRQIFLDNEKLLVAT
VKASLLKLYEKIPHTYKVQNVAVGPTKSSSDICLPSANVSNESSYSSPNSTSSNKVSNFS
SLLKSFSHSTAKNKQTPEFTSKDYSNLKTGRGVKRTLSSGNYDRDGKKQLCLSDFVSQKN
NSSDNAEPLQHETVSISMDCDSGLLADSPHDMNDCTQETLESEVHCEELHSHVTSDVSSK
AILQKPNESSSCRTETQPIDVEIEGAYPEKLPTESVHEQSSSFVGDECDRSGLEHISEQT
TVPDQTFEKKCEQNTILFDSDKKEAKRKSVTFNVSMDKVQRLLSKSKTDSIIEKDCIFDK
KPRVRFYAEIDPSKNKNAEQELSKEISKDMFSKMEIVGQFNLGFIVTKLGQDLFIIDQHA
TDEKYNFETLQTQTTLKNQKLVIPQALDLTAVNECILMDNMDIFLKNGFSFVIDKNAEPT
KRVRLAAKPISHNWEFGKEDIDELLFMLQDSPNTMCRPSRVRAMFASRACRKSVMIGTAL
SKSTMRQLVNHMGEIEQPWNCPHGRPTMRHLVNLDLVRKRKEI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggaggagggatctactgccgttccatccccaactaaagagaaaagcaaaagc
atacaggccattgataaagaggcggtacacagaatatgttccggccaggttgttcttaac
ttggctactgctatgaaagaactcgttgaaaacagtttggatgccggagctacgtcggtt
gaaatccgattgaaagagtatgggagtgaattggttgaagttattgacaatggatgtgga
gttgaagaagccaattttccaggtctaacactgaaacatcatacttcaaagatcagagaa
ttttctgatttgctgggcgtggaaacgtttggctttagaggtgaagctctgagttccctt
tgcgcccttagtgacctgacagttacaacacgacacacttccagtacaatgggaacacga
ttaacttatgactctcgtgggtctattatcaacagaacaccatgtgcacgtcagattggg
actactgtcactctcgccaatttatttagccctcttccagtacgacaaaaagaattcttg
cgccacctgaaaagagaattcgccaaaatgactcagttgttgtatgcatactgccttatt
tctacaggtgttaaaattttgtgttcaaatcaaacaaaaaagggaggaaagaatataatt
gcctccactcaaggaagtgcctctttcaaaggcaacattatgtgcatctttggagccaaa
caggccagcagtcttcttgatattgagctcgagcccccttctgcaagccacctggaagag
attggtcttcccggtaacattgatgactttagagggttccaattagaaggctgcgtttca
tcttgcagccatggacagggtcgcagctcaacagaccgtcagttttacttcataaataat
cgaccttgtgacccagtgaaggttgccaaagttgtcaatgaggtctaccatcaattcaac
cttcatcagtttcctttcatatttctaaatataaaaacagcccgtgatagtgttgacatc
aatgtgactccagacaaaagacagatatttctagataatgaaaagctgctggttgcaaca
gtcaaggcatctcttttgaaattgtatgaaaagattccgcacacatacaaagttcaaaat
gtagctgttggtccaaccaagagttcttctgatatatgtctgccatctgctaatgtatca
aatgagtcgtcctactcatcacccaactcaacaagctcaaacaaagttagcaatttttcg
tctttattaaaaagttttagtcattcaacagctaaaaataagcaaaccccagagttcaca
tcaaaagactattctaacttgaaaactgggcgaggtgtcaagagaaccttaagctcagga
aattatgatagagatggaaaaaagcaactgtgtctcagtgattttgtgtcacaaaagaac
aactcctctgacaatgcagagcctttacaacatgaaactgtttctatttcaatggactgt
gattcgggtttattagctgattcaccgcatgacatgaatgactgtactcaagaaacccta
gaaagtgaagttcactgtgaagagttgcactcccatgttacgtcagatgtctcatccaag
gcaattctgcaaaaaccaaatgagagctcttcatgtcgaacagaaacccaacccatcgat
gttgaaattgagggagcctacccagagaagttacccacagagtcagtccatgaacaatct
tctagctttgtgggagatgaatgtgatagatctggtttggaacatatctcagaacagaca
acagttccagaccaaacgtttgaaaagaaatgtgaacagaacacaatattgtttgatagt
gacaagaaagaagccaagcgtaaatctgttaccttcaatgttagcatggataaggtgcag
cgacttctgtccaagtctaagacggactccatcattgaaaaagattgcatttttgataaa
aagcctagagttagattttatgcagaaattgacccatccaagaataaaaatgcagagcaa
gagctcagtaaggagatatccaaagacatgttttcaaagatggaaattgttgggcagttc
aacttgggctttatcgttactaaattaggccaagacttattcataatcgatcaacatgcc
accgatgagaaatacaattttgaaacattacagactcaaaccaccttgaagaatcagaaa
cttgttattcctcaggctctagatctgacagcagttaatgaatgcattttaatggacaac
atggatatttttctcaaaaatgggttcagctttgtaattgacaaaaatgctgaaccaaca
aagcgtgtccgcctggcagctaaacccataagtcacaattgggagtttggcaaagaagac
attgatgaattactcttcatgctgcaggattctccaaataccatgtgccgaccttctcgt
gtgcgagctatgtttgcctctcgtgcatgtcgtaaatcggtcatgattggaacagctctg
agcaaatctactatgcgtcaacttgtgaaccacatgggagaaatagaacaaccatggaac
tgtccgcatggaagacccactatgcgacacttagttaacctagacttggtgcgcaagagg
aaagaaatttaa
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