Thrips palmi (melon thrips): 117650898
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Entry
117650898 CDS
T08251
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117650898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpal04131
]
117650898
Membrane trafficking [BR:
tpal04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117650898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
TPR_Vps41
Clathrin
Beta-prop_HPS5
zf_RING_Vps8
WD40_2
Beta-prop_WDR19_1st
zf-RING_Vps41
WDR55
TPR_VPS8_2
zf_RING_Vps8_fungal
Beta-prop_IP5PC_F
WD40_Prp19
Beta-prop_LRRK2
Beta-prop_EML
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
117650898
NCBI-ProteinID:
XP_034250431
UniProt:
A0A6P9A0H7
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MADSVSVGSDVPENISIETLNAELEELDDTEYDIPPVEQTPTLESILNDVDDRGSISEDE
VSGNHFIHPGEAFETWSMGSIGGRSRSSSERRSTTRSTTSRTTSNATVLKAGSILRHVIL
KAISSQVASASERVDAGLPTCIAVQIMVAVGTSHGLVLVFDSSQTLRSCLDSQDKDQGSV
SALCFNYDATRLLVGYARGHVLMYDVKSGKLLRTMTDVHAPGTAVLHVKFTDNPNLALCS
DSGGSVFELTFKRTMGVRGCSSKCLFSGSRGEVCSIEPLLLESVPSHPLHGTVLVAMATL
SKIIVVSIRPRMKVLFTFPLKAHPATLPLISWQFVIIQVGEQSKVVDPVLAFARESTVHF
YQVTLDMSSKIRLIPLQKMCVPYLLLSLHWLNPRTLATVDTLEQVHLIDVRSQVELEVVD
VSSAGLVYGSSHFKGLSTGGNVSKALALAGERACYNSLLSFGNQMIVLGTKGLHVLGIRT
WKERLDHLMRQKHYLDALALALAFYQDRAKAVVGLRGPKGKRKMLTRDKALDILHKYIDE
GICQAAAATEQLYRESVPVCMQYSIELNELDILYNKLWEVVSIYPVSKAVYLEALEPHLL
NEQLADIPPVIVQEFVQHYCNNKKFLALEACVVRIPVTSLDFHQVMSICWEHGLYDAIIH
LYTRGMLDFVSPLQELLQVLQNAIASGKQLSNQQITLGNKLLVYTSCCLAGRGYPYGDVP
QELVQDVKHRVFQCVTCQHSLNAKDSERAYPYLRVFLQFDTREFLNVLALAFEEPEFTSE
LGLRRRQLVVDILLHLVVQEEGFTASQIGALLTFLARQLAQNGPSDRLHVDISLFERVVD
HLTEPGAVGSQKEERQQALLELMQAGGLSQFNPEELLQKAKGAEFYRVMELLLLQRGDIH
LVVDCYLQDQPRRAQVFPFLFAELSITADTADGNQHLLLDSVENNIQKLVAVDAIQTGHL
IHQYLHSKLNNILDKFEGDTSIQYTILRGLFSYYNETLSREEPAPEPALAEKYIELLCQE
SPENLSDFLQCNQWYRLDEALKTTKRFKQDEASALLLERSGDFMGAFSLLHARLEPCLSK
LNSEDKSLHKINALTAELVRLCKKGSATMDVATRQESLWFPLLSTLLKAHINHRTEIKPL
LQQILNSMSGYVNMPAVIQIILQDPAYSGGTFGEIRDLMMGMLGNCGYEELLLQSTSRVL
SADLHLQLARELAISNKGFGPRIFPAVRNTPACCYCREPLATIGSTGNEEAILFRCGHSY
HMRCTEHPPQCLKCDT
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggctgactctgtgtccgttggtagtgatgttcctgaaaatatatcgattgaaacacta
aatgcagagcttgaagagctcgacgacactgaatatgatattccgcctgttgagcaaacg
ccaacgctggagagtattctgaatgatgttgatgatagagggtctattagcgaagatgag
gtatcaggaaaccacttcattcatccaggagaggcatttgaaacttggtccatgggtagt
ataggaggacgaagtagaagctcatctgagcgtcgaagcacaacaagatctaccacctct
agaactacaagcaatgcaactgttctcaaagctggatcaatacttcgtcatgtgattttg
aaggctatttcgtctcaagtagcctcagcaagtgaacgtgttgatgcaggcttacccact
tgtatagcagttcaaattatggttgcagtaggaacctctcatggcctagttctagtgttt
gactcctctcaaacgctaagatcatgtctggacagtcaggacaaggatcaaggctctgtt
tctgccctttgctttaattatgatgccacccgactacttgttggctatgccagaggtcac
gtccttatgtatgatgtgaagagtgggaaacttttacgtactatgactgatgttcatgca
ccaggaacagctgtgcttcatgttaagttcaccgacaatcctaatttggctctctgcagt
gatagtggaggatcagtatttgaacttacatttaaacgtaccatgggtgttagagggtgc
tcctcaaaatgtttattctctggcagccgaggagaagtttgcagcattgaaccattattg
cttgaatcagtaccatcacacccactccatggaacagttctggtagcaatggccactctc
tcaaagattattgttgtcagtatccgaccaagaatgaaagtgcttttcacctttccactt
aaagctcacccagccacattgcccttgatatcatggcagtttgtaataattcaggtggga
gagcaatcaaaagtcgttgaccctgttcttgcatttgcccgagaatctacagttcacttt
tatcaggtcacattagatatgtcgagtaaaattagattgatccctcttcagaagatgtgt
gtcccttatctattgttgtctttgcactggttgaacccaaggaccctagccactgtggat
acactagaacaggttcacctcatagatgttcgatctcaagttgaactcgaagttgttgat
gtttccagtgctggtttagtttatggttcgagtcacttcaaaggcctttctactggtgga
aacgtcagtaaagcactggctcttgcaggtgagagggcatgttataattctttgctgagc
tttggaaatcaaatgatagtgttggggaccaagggtcttcatgtcttagggattcggaca
tggaaggagcggttagaccacctaatgcgccagaaacactatttagatgctttggctttg
gcattggctttttaccaagatcgggctaaagctgtggtgggtttgagaggacctaaggga
aagcgcaaaatgctcactcgggataaggctttagatatcctccataaatatattgatgaa
ggaatttgtcaggcagctgctgctacagaacagctctatcgagagtctgtacctgtatgt
atgcaatatagtattgaattaaatgaacttgatatattatataacaagttgtgggaagtt
gtatccatttacccagtgtccaaagctgtttacctggaggctctagaaccacatctgctc
aatgagcagcttgctgatatacccccagtcatagtgcaagaatttgttcaacattattgc
aacaacaaaaagttcctggctcttgaagcatgtgttgtgcgtattccagtgacatctctt
gacttccatcaagttatgtctatatgttgggaacatggattatatgatgctataattcat
ctatatacaagaggaatgctggattttgttagtcctctgcaagaacttttacaagtatta
caaaatgccatcgccagtggcaagcagttgtcaaatcaacaaataactttaggaaacaaa
ctactggtttacacaagctgctgcttggcaggcaggggctatccttatggtgatgtccct
caagaattggtgcaggatgtaaaacatagagtatttcaatgtgtaacgtgtcagcatagt
ctgaatgccaaagattctgaacgagcttatccctacttaagagtgttcctgcagtttgac
acaagagagtttttgaatgtattggcactggcttttgaggagccagagtttacctctgag
cttggtttaagacgaagacagttggttgttgacattctattgcatttggtcgtgcaggag
gaaggcttcactgcttcccagattggagcgcttcttaccttcctggcgcgccagttggct
cagaatggaccttcagatcgtctgcatgtggatatatctctttttgagcgggtagttgac
cacctcactgagccaggagctgttgggtcacagaaagaagagcgacagcaagctctgctt
gaactcatgcaagctggaggcttgtctcaattcaacccagaagagcttttgcagaaagcc
aagggagctgaattttaccgtgtaatggaactgttgctgcttcagcgtggtgacattcat
ttggtagtagactgttacctgcaggaccagccaagacgtgctcaagtgttcccattttta
tttgccgaactttctataactgcagacactgcagatggaaaccaacatctgttgttggat
tctgttgagaataatattcagaaattagttgctgtggatgctatccaaacaggtcacttg
attcatcagtatctacattctaagcttaacaacattttggataaatttgaaggtgacact
tcaattcagtacactatacttcgaggcttgttttcatactataatgagacactcagtcgt
gaagagcctgcccctgaaccagccctagctgaaaaatacattgaactgctatgtcaagag
agtccagaaaatctgagcgatttcctccagtgcaatcagtggtacagacttgatgaagcg
ctaaaaacgacaaagaggttcaagcaggatgaggcatctgctcttctactagaaagatct
ggcgatttcatgggagccttttccctgcttcatgctcgtttggaaccatgcctttccaag
ttaaattctgaagacaaatctcttcataaaatcaacgctcttactgcagagttggtcaga
ctctgcaaaaaaggctctgctaccatggatgtagcaactcggcaggaaagcctatggttt
cctctcctgagcactttacttaaggctcatatcaaccatcgaacggagataaaaccactt
cttcagcaaattctgaacagcatgagtgggtatgtgaatatgccagctgttattcaaatc
attcttcaggatccagcatacagtggtggcacttttggagaaattagggaccttatgatg
ggaatgcttggtaactgtgggtatgaagagttattactgcaatcaacatcacgtgtatta
agcgctgacttgcatttgcagttagccagagaactagccatcagtaataaaggttttggc
cctagaatattcccagcggttagaaatactcctgcctgctgttattgtcgagagcctcta
gctacaattggatctactggaaatgaagaggctattctttttaggtgtggtcattcatat
catatgaggtgtactgaacatccaccacaatgtttgaaatgtgatacttga
DBGET
integrated database retrieval system
