Thrips palmi (melon thrips): 117650979
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Entry
117650979 CDS
T08251
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03013
Nucleocytoplasmic transport
tpal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117650979
03015 mRNA surveillance pathway
117650979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117650979
03041 Spliceosome [BR:
tpal03041
]
117650979
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117650979
Spliceosome [BR:
tpal03041
]
Complex C
Other components
EJC/TREX
117650979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
RSB_motif
Motif
Other DBs
NCBI-GeneID:
117650979
NCBI-ProteinID:
XP_034250547
UniProt:
A0A6P8ZYQ3
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MATEVLKTFSALQDELQKAKEGLRNVDSHIKRIIGRDPEAQPPGQGPPRPGQKRPATQND
DFYARGRGSFQMGGGRGRIGHPGRPQEDEGPPGIRRRLGDGPGNVFSRLSGPPIKHIKKE
KDDEFPGPFSKFYRREEQEEEEIEEDDAQFKPAISSRVIPQTRELPSKEVILAAQGDERS
KARNRRMFGALLGTLQRFRQEETRMRDREDKRAVVEKKLEEAAKREKEEMKKERQELFLD
RRKKQQEIRRIETKIQRVKEQDQWEARHRPLLNFIQTKAKPSIFYLPKVQNTKTEERLVA
SQKVIAKIMEKKRTALQEELERLEGNVQVKTENAGEQHFEDEEEEEMNTENGPTEDNEEL
QEVTGDSPVENKENRIRFANVKVEKDSEPVQSDPEDKQREGDHSTDNHRQPSNVKRVRES
RENLHDRPKDRQRRDPQDDRDRAREKESARERGKERDRGNERDRDRMRERGSRMKARVEA
KKEEEEKWDRKRERHNSSDTNAMEEEDEADDNSAIPPPELSSISLPGEQSPSFMQPELGE
LDDASE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgaagttctgaaaacgttcagtgctttacaggatgagctgcagaaagccaaa
gaaggtcttcggaatgtggacagtcacataaaacggattattgggagggaccccgaggcc
cagcctccaggacagggtccgcctaggcccggacagaagagacctgccactcaaaatgat
gatttttatgctagagggagaggatcttttcaaatgggcggaggaaggggtagaattggc
catcctggacggccgcaggaggatgaaggacctcccggaattcgcaggaggctgggagat
ggacctggcaatgttttcagcagattgtctggacctcctataaaacacatcaaaaaggaa
aaggatgatgagtttcctgggcccttctcaaagttttacaggagagaggaacaggaagaa
gaggaaatagaagaagacgatgctcaatttaaacctgccattagttctcgtgtaattcct
cagacccgtgaacttccgtctaaggaggttatactagctgctcagggtgatgagcgaagt
aaagcaagaaatagacgaatgtttggagcccttttgggaacccttcagcggtttcgacaa
gaagaaacaaggatgagggaccgggaagacaaacgagcagtagttgagaaaaagcttgaa
gaagctgcaaaacgggaaaaagaagagatgaaaaaagaacgtcaagaattgtttcttgac
agacgcaaaaaacagcaggaaattcgccgcattgagaccaaaattcaacgggtcaaagaa
caagaccagtgggaagctaggcatagacccttattgaattttattcaaacaaaagcaaag
ccatcaattttctatttaccaaaagttcaaaatacaaagactgaggaaaggcttgttgcc
agtcaaaaggttatcgcaaaaataatggagaagaaaagaacagctctccaggaggaatta
gagcgtctggaaggcaacgtccaggttaagactgaaaatgctggggaacaacattttgaa
gatgaagaagaagaggaaatgaacacggaaaatggacctacggaagacaatgaagaattg
caggaggttactggtgacagccctgttgaaaataaggagaacagaatacgttttgcaaat
gtgaaagtggagaaagactctgaacctgtgcagtcggaccctgaagataagcagagggaa
ggtgaccattctactgacaatcacagacaaccttcaaacgtgaaacgtgtacgagaatca
agagagaacctgcacgatcgcccgaaagatcggcagcgacgtgatcctcaggacgaccgc
gacagagcgagagagaaggagtcggcgcgagaacgggggaaagaaagggacagaggaaat
gaaagagacagggataggatgcgggaaagaggttcaagaatgaaagcgcgggtggaggca
aagaaagaggaggaggaaaagtgggacagaaaaagagagaggcataatagcagtgatact
aatgcaatggaagaggaggatgaggctgatgataattctgctatcccaccacccgaactg
agctctatatcactaccaggtgaacagtctccatcttttatgcagcctgagttgggtgag
ctagatgacgcttcagaatga
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integrated database retrieval system