KEGG   Thrips palmi (melon thrips): 117650979
Entry
117650979         CDS       T08251                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03013  Nucleocytoplasmic transport
tpal03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117650979
   03015 mRNA surveillance pathway
    117650979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpal03019]
    117650979
   03041 Spliceosome [BR:tpal03041]
    117650979
Messenger RNA biogenesis [BR:tpal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117650979
Spliceosome [BR:tpal03041]
 Complex C
  Other components
   EJC/TREX
    117650979
SSDB
Motif
Pfam: Pinin_SDK_memA Pinin_SDK_N RSB_motif
Other DBs
NCBI-GeneID: 117650979
NCBI-ProteinID: XP_034250547
UniProt: A0A6P8ZYQ3
LinkDB
Position
Unknown
AA seq 546 aa
MATEVLKTFSALQDELQKAKEGLRNVDSHIKRIIGRDPEAQPPGQGPPRPGQKRPATQND
DFYARGRGSFQMGGGRGRIGHPGRPQEDEGPPGIRRRLGDGPGNVFSRLSGPPIKHIKKE
KDDEFPGPFSKFYRREEQEEEEIEEDDAQFKPAISSRVIPQTRELPSKEVILAAQGDERS
KARNRRMFGALLGTLQRFRQEETRMRDREDKRAVVEKKLEEAAKREKEEMKKERQELFLD
RRKKQQEIRRIETKIQRVKEQDQWEARHRPLLNFIQTKAKPSIFYLPKVQNTKTEERLVA
SQKVIAKIMEKKRTALQEELERLEGNVQVKTENAGEQHFEDEEEEEMNTENGPTEDNEEL
QEVTGDSPVENKENRIRFANVKVEKDSEPVQSDPEDKQREGDHSTDNHRQPSNVKRVRES
RENLHDRPKDRQRRDPQDDRDRAREKESARERGKERDRGNERDRDRMRERGSRMKARVEA
KKEEEEKWDRKRERHNSSDTNAMEEEDEADDNSAIPPPELSSISLPGEQSPSFMQPELGE
LDDASE
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggctaccgaagttctgaaaacgttcagtgctttacaggatgagctgcagaaagccaaa
gaaggtcttcggaatgtggacagtcacataaaacggattattgggagggaccccgaggcc
cagcctccaggacagggtccgcctaggcccggacagaagagacctgccactcaaaatgat
gatttttatgctagagggagaggatcttttcaaatgggcggaggaaggggtagaattggc
catcctggacggccgcaggaggatgaaggacctcccggaattcgcaggaggctgggagat
ggacctggcaatgttttcagcagattgtctggacctcctataaaacacatcaaaaaggaa
aaggatgatgagtttcctgggcccttctcaaagttttacaggagagaggaacaggaagaa
gaggaaatagaagaagacgatgctcaatttaaacctgccattagttctcgtgtaattcct
cagacccgtgaacttccgtctaaggaggttatactagctgctcagggtgatgagcgaagt
aaagcaagaaatagacgaatgtttggagcccttttgggaacccttcagcggtttcgacaa
gaagaaacaaggatgagggaccgggaagacaaacgagcagtagttgagaaaaagcttgaa
gaagctgcaaaacgggaaaaagaagagatgaaaaaagaacgtcaagaattgtttcttgac
agacgcaaaaaacagcaggaaattcgccgcattgagaccaaaattcaacgggtcaaagaa
caagaccagtgggaagctaggcatagacccttattgaattttattcaaacaaaagcaaag
ccatcaattttctatttaccaaaagttcaaaatacaaagactgaggaaaggcttgttgcc
agtcaaaaggttatcgcaaaaataatggagaagaaaagaacagctctccaggaggaatta
gagcgtctggaaggcaacgtccaggttaagactgaaaatgctggggaacaacattttgaa
gatgaagaagaagaggaaatgaacacggaaaatggacctacggaagacaatgaagaattg
caggaggttactggtgacagccctgttgaaaataaggagaacagaatacgttttgcaaat
gtgaaagtggagaaagactctgaacctgtgcagtcggaccctgaagataagcagagggaa
ggtgaccattctactgacaatcacagacaaccttcaaacgtgaaacgtgtacgagaatca
agagagaacctgcacgatcgcccgaaagatcggcagcgacgtgatcctcaggacgaccgc
gacagagcgagagagaaggagtcggcgcgagaacgggggaaagaaagggacagaggaaat
gaaagagacagggataggatgcgggaaagaggttcaagaatgaaagcgcgggtggaggca
aagaaagaggaggaggaaaagtgggacagaaaaagagagaggcataatagcagtgatact
aatgcaatggaagaggaggatgaggctgatgataattctgctatcccaccacccgaactg
agctctatatcactaccaggtgaacagtctccatcttttatgcagcctgagttgggtgag
ctagatgacgcttcagaatga

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