Thrips palmi (melon thrips): 117651313
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Entry
117651313 CDS
T08251
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117651313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpal03400
]
117651313
Enzymes [BR:
tpal01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
117651313
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
117651313
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
117651313
DNA repair and recombination proteins [BR:
tpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117651313
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
117651313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
117651313
NCBI-ProteinID:
XP_034251095
UniProt:
A0A6P9A0Y1
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MNFLNSRVSKSVCQRCTTFFTSLSTFTTLMSLTFKRKNDEEASNPPKKPASASSHWANGL
LGAMNDPNLRIYTDSQVVVIKDKYPKARFHYLVLPKESISSLKAINRDHLDLLEHIHHVA
CDIAQQEEHKNITFKMGYHAEPSMNHLHLHLISDDFCSECLKTKKHYNSFTTDHFVDSLK
LIESVKKTGKAITVSHAEAEKLLKKSLVCFKCGEEISNMPKLKQHLARHASRADD
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaactttttgaacagccgcgtttccaaaagtgtctgtcaacgttgtaccactttcttc
acatcacttagtactttcacaacgctcatgtctttaacctttaagcgaaagaatgacgag
gaagccagcaacccaccgaagaaacctgcctctgcctcaagccactgggcgaatggactc
ctgggggcgatgaatgaccctaacctaagaatttatactgatagtcaggttgttgtcatt
aaagacaaatatccgaaagcacgatttcactaccttgttttgcccaaagaatctatttca
agtttgaaggcaataaatagagatcatcttgatcttttagaacatattcatcatgttgcc
tgtgacattgctcaacaagaagagcataaaaacattacattcaaaatgggctatcatgca
gagcctagtatgaatcatttgcatttgcacttgataagtgacgacttttgctcagagtgc
ttgaaaaccaagaagcactacaattcatttacaacggatcattttgttgactctctaaaa
ctgattgagtcagtgaagaaaacgggaaaagcaatcactgtctcacatgctgaagctgaa
aaactcttaaagaaatctttggtgtgtttcaagtgcggtgaagaaataagcaacatgccc
aagttaaaacagcacctagcccgccatgctagccgtgctgatgattaa
DBGET
integrated database retrieval system