Thrips palmi (melon thrips): 117651384
Help
Entry
117651384 CDS
T08251
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03013
Nucleocytoplasmic transport
tpal03015
mRNA surveillance pathway
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117651384
09122 Translation
03013 Nucleocytoplasmic transport
117651384
03015 mRNA surveillance pathway
117651384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117651384
03041 Spliceosome [BR:
tpal03041
]
117651384
03009 Ribosome biogenesis [BR:
tpal03009
]
117651384
03012 Translation factors [BR:
tpal03012
]
117651384
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117651384
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117651384
mRNA cycle factors
Stress granule specific factors
117651384
Spliceosome [BR:
tpal03041
]
Complex C
Other components
EJC/TREX
117651384
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
90S particles
Helicases
117651384
Translation factors [BR:
tpal03012
]
Eukaryotic type
Initiation factors
eIF-4
117651384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
ResIII
AAA_19
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
117651384
NCBI-ProteinID:
XP_034251279
UniProt:
A0A6P9A1X7
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAEGQRTRRVLPNEDLSNVEFETSEDVEVLPAFDSMDLREDLLRGIYAYGFEKPSAIQQR
SIRPIVKGRDVIAQAQSGTGKTATFSISILQSLDISLREVQVLCLSPTRELAVQIQKVIL
ALGDFMNVHCHACIGGTNLGEDIRKLDFGVHVVSGTPGRVFDMIRRRSLRTRSIKLLVLD
EADEMLNKGFKEQIYDVYRFLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELT
LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSM
HGDMPQKERDVIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGR
SGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggacagagaacacgccgtgttttgcctaacgaagacttgtcaaatgtcgaa
tttgaaaccagcgaagatgtcgaagtcttaccggcgttcgactctatggacctgcgagaa
gatctcttgcgagggatctacgcttacggctttgaaaaaccctccgcaatccaacagcga
tccatcagacccattgtcaaaggaagggatgtgattgcccaagcccagtctggtacgggt
aaaactgctacattctccatctcaatcttacagagcctggacatttctcttcgagaagtt
caagttctgtgtctttcaccaactcgtgaattggcagttcaaattcagaaggttattttg
gcacttggtgatttcatgaatgtccactgccatgcgtgcattggtggtactaaccttggt
gaggacatcaggaaacttgactttggagtacatgtggtgtcagggacacctggaagagta
tttgacatgattcggcgtcggagtcttcggacaagatcaatcaaattattggttcttgat
gaagctgatgaaatgttgaacaaaggatttaaagaacagatatatgatgtatatcgcttt
ttgcctccggcaacccaggttgtgttgatatctgccaccctaccccatgagattttggag
atgacaagcaagttcatgactgaccccattcgcatcttggtcaaacgtgatgaattgaca
ctggaaggtattaagcagttctttgtggctgtagagcgtgaggaatggaagtttgacaca
ctgtgtgatctgtatgatacacttaccatcactcaggctgttattttctgcaacaccaag
aggaaggtggattggcttacagagaaaatgcgagaggctaacttcactgtcagttcaatg
cacggcgacatgcctcagaaggaacgagatgtcatcatgaaagaattccgttctggccag
agtcgggtactcataaccactgatgtctgggctcgtggtattgatgttcaacaagtttca
cttgttattaactatgacctacccaacaatcgtgaattgtacatccacagaattggtcga
tcaggccgatttggaaggaagggtgttgccatcaactttgtgaagagtgatgatatcaga
attctgcgagatatagaacagtattattcaacgcagattgatgaaatgccgatgaatgtt
gctgatttgatttaa
DBGET
integrated database retrieval system
