Thrips palmi (melon thrips): 117651482
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Entry
117651482 CDS
T08251
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpal03016
]
117651482
Transfer RNA biogenesis [BR:
tpal03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
117651482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
VPS9
TOM20_plant
Motif
Other DBs
NCBI-GeneID:
117651482
NCBI-ProteinID:
XP_034251401
UniProt:
A0A6P9A3Y4
LinkDB
All DBs
Position
Unknown
AA seq
1351 aa
AA seq
DB search
MRNLFVSNHREYSIPGLKLATAEDSQKLLVIDHIKNAVFVESCGTVYRYSPEGETLVELF
SSTEYYSNEEPVPTIVGMCYFQVTDTICLAVDKGDLLSLSASTLGEVECVGFVESGLQLM
EPSPDEDVLVLVTAQNTVITMTASFDPINETDLQQKEFGENRFITVGWGKKETQFHGSEG
KAAALAKSTTQAAPISKFDSGLPQITWRGDGSLFAVNSVNQETGERFVRVFDRKGDLMYT
SERIPGLEGVVSWRPSGNLMACTQRMPNKHVVCFLEKNGLRHGDFTLPFALDTVRVRQLL
WNAESSILLVWCQVLEGVPPPAGLVAGQNTLLLWTVNNYHWYLKQRIDLKSELSPVAARW
DMDSGNRLHIICTGAKYISYEFSWRVDHSNGMTNTDGAFVGVIDGDSLLLTSFRYNVIPP
PMCGTTLKLAAPALEVVFAPQHVPSAKELECRYLNTSSTEDSGFGEVVESLSSNPNNFCV
LLSNGLFAAYSYVGGPRAPNPSHTLAGTYQIEWEGDQTIPSHCFHHWTWVSRDSMLCSTT
LDNQSHLCVFEMDPLGAVEFGRISLKKKIALLSNVESIAMGVDTNIAYIQLSDGKVLSYS
IDSDALVEMFTFPHPVVKMVACRVDKETNGGQEIILGLANHNRLYANTDLVMSNVTSVDL
HSQFLLLTTSQQQLFCCPLKRASILSLSKSSAEIVSYGVAERKVERGSRLVVVVPDGNRV
ILQMPRGNLECIEPRALSLCQLAILLNSQSYFEAFDLARKQRINLNLFVDHDADLFLQNI
DMFVKRVTNPQWLCLFLAELQDEDCTTTMYKAHYPDVRSASLPDKINTVCDAFLASVKKM
DDSESAKLTLPILTALVLKSTPGGLESALTLIKTLKESEDKAEGAVPWTSALRHLLYLRD
VNQLMDAALGMYDFNLVVLVASKSQKDPKEYLAFLNKLREMEPNYQRYSVDKHLRKWGSA
LLNLIQCPDDHTDELLQFVVNQGLFREALRALPNSDERFKMIASAYADKLASQRLYKEAA
VMYRRAGDFFNAMLSHQKALAWRNCIQDATAAKIIDEDLKELLGDLATALQGACQFEEAA
IIYHTYLQQPLEAVKALCLGHLWPEAQRIATTFQLSCLETVIHPSALEYAETLSTQVKNA
ADLFNTHYSRLVELRREKQLARERLEAQDGDVDGYGESDLLSDTSSVTGSSLSSKGSSSL
SSGSNRSSKNRRKHERKILSLKKGNPHEELALLYALHQCISSSFSLREEVSSLSNTLVDF
GDDSTAEDLQNSLSKTLKAMESSFNKIWLPSLSLGYNSQQAFGPNATSNMLASSISSNST
NQLDMTLLEPLYRFPPVVRPVKWEMDMLKKT
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatttatttgtgagcaatcatagggagtattccatccctgggctgaagctcgcc
actgccgaagactcccagaaactgctagttatagaccacattaagaatgctgtttttgtg
gaaagttgtggcactgtgtacagatattcacccgagggtgaaactcttgtggaactgttc
agctcaactgagtactacagtaatgaagaacctgttcccacaatcgtgggaatgtgttat
tttcaagtgacagataccatctgtctggcagtcgacaaaggagacttgttgagcctcagt
gcatcgacacttggggaagtagaatgtgttggtttcgttgaatcaggactgcagctcatg
gagcctagtccagacgaagatgtattggtactggtgacagcccagaacactgttataact
atgacagcttcattcgatcctatcaatgaaacagatttgcagcaaaaagagtttggagaa
aacagatttataacagttggatgggggaagaaggagacccagtttcatggctctgaagga
aaagctgcagctctagccaaatcaacgacccaagctgcgccaatatcaaaatttgactca
ggacttcctcaaataacgtggagaggagatggttcattgtttgctgtcaactctgtaaat
caagagacgggcgagcgctttgtccgtgtatttgataggaaaggagatttgatgtacact
agtgagcgcattcctggcttggaaggagtggtatcttggaggccttcgggtaaccttatg
gcttgtacccaaagaatgccaaacaagcatgtggtctgcttcttggaaaaaaatggttta
agacatggagatttcactcttccctttgctttggacactgtacgtgttcgccaactttta
tggaatgcagaatcgagcattcttctagtgtggtgtcaggttttagagggagttcctcca
ccagcagggttggtagctgggcagaatacccttctgctgtggactgttaacaattatcac
tggtacttgaagcaaagaatagatttgaagtctgagctcagccctgtcgctgctcgttgg
gatatggattcgggaaacagattacatattatttgcacgggagccaaatatattagttat
gaattctcttggcgagtagaccacagcaatggaatgaccaacactgatggtgcttttgtt
ggagtgattgatggagattctctgttactaacatcttttcgctataatgtgataccacct
cccatgtgtggtacaacactgaaacttgctgccccagctttggaagtagtatttgctccc
caacacgtaccgtctgcaaaagaacttgaatgccggtacctcaatacaagctccacagaa
gactcagggtttggagaagttgttgaatccttaagttcaaatccaaacaacttctgcgtc
ctcttgagtaatggcttgtttgctgcctattcttatgttgggggacctcgagcaccaaac
ccaagtcacacactggctggaacataccagatagagtgggagggtgatcaaaccattccc
agtcattgtttccaccattggacttgggtgtcccgtgattcaatgctttgcagcaccaca
cttgataatcagtcacatttgtgtgtttttgaaatggatcctttgggggctgtagagttt
ggtcgaatttctctgaagaagaaaattgctctcttgagcaatgttgaatcaatagcaatg
ggtgtggacaccaacattgcatacatccagttgtcagacggtaaagttttaagctactcc
atcgattcagatgcactggtggaaatgttcacttttcctcatcctgttgtgaaaatggtg
gcgtgtagagtggataaggagaccaatggtggtcaggagattatccttggtcttgccaac
cataatcgactctatgccaacactgacttagtgatgagcaacgttacctctgtcgacttg
cattctcagttcctgctcctcaccacatctcagcaacaactgttttgctgccctctaaaa
agagcatcaattttatctttgtcaaaatcaagtgcagagatagtgagttacggtgttgct
gaaaggaaagttgagagaggatcacgtttagttgttgttgttcctgatggaaatcgagtt
attctgcagatgcctcgtggtaatcttgagtgcattgaaccaagagcactgtctctttgc
caattagccattttgttaaactcccaatcctattttgaagcctttgacttggcccgcaaa
caaagaatcaatttgaatttatttgtcgatcatgatgcagatctattccttcaaaatatt
gatatgtttgttaaacgtgtcaccaatcctcaatggctgtgtctcttccttgctgagctg
caggacgaagactgtacaactacaatgtacaaagctcattatcctgatgttcgatcagca
tcacttcctgataaaatcaacacagtttgtgatgcattcctggcatctgtaaaaaaaatg
gatgattcagaatcagccaagttgactctcccgattcttactgcattagtcctgaaaagt
acgcctggtggactagaatcagctttgacattaattaagaccttgaaagagtcagaggat
aaagctgagggagctgtgccttggacttcagcattacgacatttgttgtatctgcgggat
gtgaaccagttgatggatgcagccttgggcatgtatgacttcaatctggttgtccttgtt
gcttcaaagtctcagaaggatcccaaggaatatttggcctttctcaacaaattacgtgaa
atggaacctaattatcaacgctacagcgtagacaaacacctgcgaaaatggggatcagcc
ttattaaatctcattcaatgtccagatgatcatactgatgagttgcttcaatttgttgtg
aaccaaggattgttcagagaagcactacgagctttgccaaattcagatgaaaggtttaaa
atgattgcatcagcttatgcagataagctagcatctcaacgtctgtacaaagaggcagca
gtcatgtaccgaagagctggtgatttcttcaatgctatgttgtcacatcagaaggcctta
gcttggagaaattgtattcaagatgctactgccgctaaaatcattgatgaagaccttaaa
gagctactcggtgatctcgcaactgctcttcaaggagcttgccagtttgaagaggcagca
attatttatcatacatatttacagcaaccattggaggctgtgaaagcactttgccttggc
catctctggcctgaagctcaaagaattgcaaccacattccaactgagttgcttggaaact
gtcatccatccgtcagctttggagtacgcggagacactttctacccaagttaaaaacgct
gctgatctgtttaatacccactactccagacttgtggaattgaggagagagaaacagctt
gcccgcgagagactggaggctcaagatggtgatgttgatggctatggtgaaagtgatttg
ctgtctgacacaagtagtgtgacaggcagttctctgtcgtctaaaggctcttcaagcctg
tcatctggaagtaacagatcaagcaaaaaccgcagaaagcatgaacgtaaaatcctgagt
ctgaagaagggaaaccctcatgaagagttggctcttttgtatgctttacatcaatgtatt
tcctcatcattttctttgagagaggaggttagttccttgagcaatactcttgtggatttt
ggagatgatagtactgcagaagatcttcaaaactcactatccaaaactctgaaagctatg
gaatcaagcttcaataaaatttggttgccttctttgagtcttggctacaattctcagcag
gcatttggacccaatgcaacatctaacatgctcgcatcaagtatcagctccaattcaaca
aatcaattagatatgaccttactggagcccctgtaccgctttccaccagtggtccggcca
gtgaagtgggagatggatatgttaaagaagacctga
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