Thrips palmi (melon thrips): 117651770
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Entry
117651770 CDS
T08251
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117651770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpal03021
]
117651770
03036 Chromosome and associated proteins [BR:
tpal03036
]
117651770
Transcription machinery [BR:
tpal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117651770
Coactivators
SAGA/TFTC/STAGA complex
117651770
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117651770
STAGA complex
117651770
TFTC complex
117651770
SAGA complex
117651770
SLIK complex
117651770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_WDR75_2nd
LisH_PAC1
WD_LRWD1
WDR54
Beta-prop_NWD2_C
SLATT_fungal
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
117651770
NCBI-ProteinID:
XP_034251990
UniProt:
A0A6P9A3F8
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MGDKNTLLAVLQYLEKHNLKGTSDLLRKEANLGEETSSLQCPQSDSDVSSMLAAYKSEGD
PEKYEEAYADLKRFVEGALDIYKYELGMILYPVLVHMYLELLFNDHEDQAKRLMEKFGPD
QEEYFQEDLKKLSHVCKKDHLKGNELTDTFKSNEFIIRMSRDTLSILKRHLSEKKHSVVQ
NIIQEHLYLDMYEGVARNKQQIDATSGAMIGEASRADNKARVYYGLLKEPDVSNAAIEEE
EDDEEGGDKPKKKKSKKDHLYPKKSKSDPNAPPVDRMPLPELKEAELREKAKALRDGSKR
VNLGPDTLPSICCYTLLNANHSVTCAEISEDSSLLAVGFNDSFIKVWSLVPQKLRSMKSA
DQLQDIDREADDVLARMMDDRSSEACRTLLGHSGPVYRVAFSPDRQLLLSCSEDSSIRLW
SLLTWSCVVCYKGHTYPVWDVRFAQHGYYFATGGHDKTARLWATDQHQPLRIFAGHYSDV
DCVQFHPNSNYLASGSSDRTVRLWDCVTGCQVRLMTGHKGHVLCLCFSVEGRFLASAGAD
SRILLWDLAHGHLLAELCSHTASILSLAFSREGSILVSGSTDCTVKVWDFTKLAETMALE
DVNISHNPDIKKDSDTFLLRSYATKNSPILNLHFTRRNLLLAVGLFDSQS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaaaaataccctgttggctgtgttacaatatctggagaaacacaatttgaag
ggaacctctgatcttctccgcaaggaagcaaatcttggagaagaaacttcaagtttacaa
tgtcctcagtccgattccgatgtaagcagcatgcttgctgcttacaagagtgagggagac
cctgaaaagtatgaggaagcatatgcagacttgaaacgttttgttgagggtgcgcttgac
atctacaagtatgagcttggcatgattctttatccagtacttgtgcacatgtacctagaa
cttttgttcaatgaccatgaggatcaagcaaaacgccttatggaaaaatttggacctgac
caggaggagtactttcaagaagacttaaaaaagctttcgcatgtatgcaaaaaagatcat
ttaaaaggcaatgaactgactgataccttcaaatcaaatgaatttattattcgcatgtct
cgtgacacacttagtattctcaaacgacacctatcggagaaaaaacatagtgtagtgcaa
aacattatccaagagcatttgtatttggacatgtatgaaggtgtagctcgtaacaaacaa
caaattgatgcaacctcaggtgcaatgattggagaggcatctagggcagataacaaagca
agagtctactatggccttctgaaagaacctgatgtatcaaatgctgccattgaggaagaa
gaagatgatgaagagggtggagacaaacctaagaagaagaaatctaagaaagaccacctt
tatcccaaaaaatctaaatctgatcccaatgctcctcctgttgatcgcatgccacttcca
gaattaaaagaggcagagctaagagaaaaggccaaagctctaagggatggttcaaagaga
gttaatttgggtcctgataccctaccatcaatatgttgctacactcttttgaatgcaaac
catagtgtgacctgtgcagaaatatctgaagactcaagtttattagctgttggttttaat
gattctttcattaaagtttggagcctcgttcctcaaaaacttaggagcatgaagtcagct
gatcagttgcaagatattgatcgtgaagcagatgacgttctggcgcgtatgatggacgac
cgatcatcagaagcttgtcgaacgctcttagggcacagtggtccagtttatcgtgtagcg
ttcagtcccgatcgacagcttttgctgtcttgctccgaagactcctcaattcgcttatgg
tctttgctcacatggtcctgtgttgtttgctataagggtcatacctacccagtttgggat
gttaggtttgcccagcacggttactattttgccactggtggtcatgataaaacagctcgt
ttgtgggccacagaccaacatcagcctttgaggatatttgctggacattattcagatgtt
gattgcgtacaatttcatcccaattccaattacctggcctcaggctccagtgaccgaact
gttcggttgtgggactgtgttactggctgccaggttcggctgatgactggacacaaggga
catgttttatgcctttgcttttctgtggagggtcgtttcctagcatctgcaggagctgac
tcaagaatattgttgtgggaccttgctcacggtcacctactagcagaactgtgtagccac
acagcttcaatattatctcttgctttcagccgggaaggaagcattttagtgtcaggttct
acagattgcacggtcaaagtttgggacttcactaaattagcagagacaatggcactcgaa
gatgtcaatatatctcacaatcctgatataaagaaagacagtgatactttccttctacgg
tcctatgccactaagaattctcccattcttaatctacattttactcgtcgcaatcttctt
ctagctgttggattgtttgactctcaaagttag
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