Thrips palmi (melon thrips): 117651784
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Entry
117651784 CDS
T08251
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117651784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117651784
Spliceosome [BR:
tpal03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117651784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
YPEB_N
Motif
Other DBs
NCBI-GeneID:
117651784
NCBI-ProteinID:
XP_034252020
UniProt:
A0A6P9A3I5
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All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MSLADELLADLEENEAPEEEVMDTEDAERXDDEHVFVRPAIPSKIEDEVKVTNIRQLAKL
HDSDQLKSILEQIETYRYKVRKPEDIVGPVEQDPEYLLIVEANNIAVEVDNEIGVIHRFT
REKYSKRFPELESLVVGPLEYVMTVKELGNDLDNAKNNEQLQQFLTQATIMVVSVTASTT
QGQALTPSEWESIVEACEMAINLNNYKLRIYEYVESRMAFIAPNLSHIVGASTAAKMMGV
AGGLTNLSKMPACNVLLLGSQKKTLSGFSQVTTLPHTGFIYYSEIVQDAPPDLRRKMARL
VAGKGILAARVDASHESADAHIGQMFREEIEKKLDKLTEPPPVKFVKPLPKPIDPSRKRR
GGKRVRKMKERYAVTELRKQQNRLNFADIDDDAYQEDLGYNRGTIGKTGTGRIRLPQVDE
KTKVRISKTLQKNLQKQQQVWGGSTTVKKQVSGTASSVAFTPLQGLEIVNPQAAEKNVSE
ANARYFSNTASFVKIQKS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcagatgagcttttggcagatttggaagaaaatgaggctccagaggaggaa
gtcatggacactgaggatgctgaacgctgagatgatgagcatgtctttgtaaggcctgct
atcccttcaaaaattgaggacgaggtgaaagtgaccaacatccgtcagcttgctaaatta
catgactccgatcagctgaagtcaatacttgaacagatagaaacttatagatataaagta
cgaaaacccgaagatattgttgggcctgtggagcaagatcccgaatatttgcttattgtg
gaagcaaataatattgcagttgaggttgataatgaaataggtgttattcacagattcact
cgagaaaagtattctaaacgattccctgagttggaatccttggttgttggaccattggaa
tatgtcatgacggtcaaggaactgggaaatgatctggacaatgcaaagaacaatgaacaa
ctgcaacaattccttacacaagccaccatcatggttgtctctgtaactgcatctaccact
caagggcaagcattgacaccatctgaatgggaaagcatagtagaagcatgtgaaatggcc
attaacttaaacaattacaaacttcgcatttatgaatatgttgagagtagaatggcattt
attgcaccaaatctgtctcacattgttggagcctctactgcagctaaaatgatgggtgtt
gctggtggtctcacaaatctttccaaaatgccagcttgcaatgtcctactccttggatcg
caaaagaaaaccctgtcaggattctcacaggtcactacccttccacacactggttttata
tattattcagaaatagtgcaagatgctcctccagatctccgaaggaagatggcaaggcta
gttgcaggcaaaggaattttggctgccagagtggatgcatcccatgaaagtgctgatgca
cacattggtcagatgttccgagaagaaattgaaaagaagttggacaaattaacagaacca
ccgccagtcaagtttgtaaagccattgccaaagccaatcgatccatcccgtaagcggcgt
ggtggaaaaagagtgcgtaagatgaaagagcggtatgctgtcacagaactaaggaaacaa
caaaacagactgaactttgctgatattgatgacgatgcctatcaagaagatcttggttac
aatcgaggtactattggcaaaactggtactggccggatcaggctacctcaggttgatgag
aaaaccaaagtgcgaatttcgaaaacacttcaaaagaatcttcagaaacaacagcaagtt
tggggtggtagcaccacagtcaagaagcaagtttcaggaacagcttccagtgttgctttc
acaccattacagggtctggaaattgttaaccctcaagcagctgagaaaaatgtcagtgag
gctaatgcaagatatttctccaacactgcttcatttgttaagattcaaaagagttaa
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