Thrips palmi (melon thrips): 117652004
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Entry
117652004 CDS
T08251
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117652004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpal03032
]
117652004
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117652004
DNA replication proteins [BR:
tpal03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117652004
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
117652004
BRITE hierarchy
Motif
Pfam:
AAA_12
Dna2
EMC3_TMCO1
AAA_11
PDDEXK_1
Cas_Cas4
Viral_helicase1
AAA_30
AAA_19
Dna2_Rift
UvrD_C
UvrD_C_2
AdoMetDC_leader
Motif
Other DBs
NCBI-GeneID:
117652004
NCBI-ProteinID:
XP_034252521
UniProt:
A0A6P9A895
LinkDB
All DBs
Position
Unknown
AA seq
1659 aa
AA seq
DB search
MKRSTNVKKNPNQRSISSFFTPASSPKVGKTSVTCTSSTPAASHTPSSTSNLTSESKVLS
TSENEKTRPSSLSPLKNCTPSKKRKLELSHISSADRKNISPPANVPNVSLSKKSKRLSLN
FKLSPDVGKAFIDTQSKKSPVKIDKPIHKEENDLNILRTPDMPKHDSPSSLRRDVKERCD
LISLSPAKRNITPEKKSQVETVTSKKFVISPIKTENDEVLKSILQDISPMKSDSKVSAPR
KKPSKLRTSSLFSLQSVGTTSTLPERGATNGTSKPSLKKSSSSSSLSDTPELKYPALDIR
PKTLRRKSTEDFLSSNKDSCSPPKLTSCANSPVKPRKILSSPVRRSPRKIASLSTTLQDE
KKTTKVETPPFLAEELRILDKENKIDSQAAPRRSPRKHISTSPTVKKTIGSNSPAKGTPK
SFPSKPQTTTLTESNEFHDIEAVFQDDFDDVLSLMDKMNEEELSPLDLREAQLCEVVSIS
VEIPYKEVIIHVKSIGNKSVASCRVRGCWLGCPVSEGDCISLEAVRVKDEWLLDNTQGFL
VLHPDTLISGTTVVGSLFCARRSVLSSLFRGMDSDSPIMVIGSIVHELFQMVLQQRKRTE
PEVRQLSEQLISSKNCVSMMYAANMTMAQMQKELSGFIPRIVNFVEKFVEIPKPVRKDRK
GAWLGAPASSCENPIRAFKGENRGAKDFNGKIIGIRDIEETLWEPKLGIKGMVDVSVEVQ
DTHGNKKIMPLELKTGKASFSAEHRGQVTLYTMMMSRMGQPVESGLLLYLREGQMQEVSV
SRNESKDLILLRNTMAHYLKPRAPVINEETGHFFPPKLPEPISFRSACEKCPYVTLCSTF
LKEDGLSAISSDHPMVSIASSSTEHVSKLHSDYFLHWMSLLLMEDMEQMKTANLRYIWRF
TPKDREKGRKAITNLRLLKPGVEVAGKFHHTFTRDVSGAEICDLRDLGLSAGDYILISTN
KRVAIERGSIIDIDASCVRVSTNRNLFERYAHETFHLDASESNTVLVFNLTNLGCLLDNN
ESAERLRKIIIDSCFSFILSMCISSPTLNLLLKILLIKPLFCQVMIRARLLRENGHYLPR
SSFVMRRHFFNNEETGYFKTQKRQAVSQNPMTDPSMMTEMLKGNITTVLPMIVIGGWINW
TFSGFVTTKVPFPLTLRFKPMLQRGIELVSLDAAWVSSASWYFLNVFGLRSIYTLVLGEN
NAADQSQHLQDQMSGAAMAMPPDPKVAFKAEWEALEICEHRWALENVESILLGYTVYGYF
VLSSGKTATMVALVQLLVRAGLSVLVTSHTHSAVDNLLVRLKKVGLKFLRLGPDSRIHPH
VLSFSETSLTKHCNSPEDLDKVYSQQQIVGVTCLGAGHACLSRRVFDICLVDESTQVLQP
SVLRPLFNARRFVLVGDPEQLPPVVKCHQALELGLSESLFARLDSEAATVSLTLNYRMNQ
VITDLANSLTYEGKLKCGNDKVANATLHLASPAKVPEESWLAASLSTDIEKSAIFIDTCG
ASPKLNVENAQSSESNGESSCSNHFELSLVMKLLYTFLNNGVNTEGIGVMAPYRAQVSLL
TQAIKSDPKLSEIEVNTVDQFQGRDKEVVVYSCTRSDGASQKQAKERGILNDKRRLTVAI
TRAKHKLVLVGHSQTLKVYAPFEKLLSCIPKNNIIPVDL
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggtctactaatgttaaaaagaatccaaatcaaagaagcatttcatcgttcttt
acccccgcgtcctcaccgaaagttggaaagacatctgtaacatgtacttcttctacccct
gctgcgtcccatacaccctcatccaccagcaaccttacttctgaatcaaaagttttaagt
acatcagaaaatgaaaaaactagaccttcctcattaagcccccttaagaattgcacgccc
tccaagaaaagaaagcttgagttgtctcacataagctccgctgataggaagaacatatcg
cctccagcaaacgttccaaatgtgagcctgtcaaagaaaagtaagagactgtccttgaat
tttaaattgtcacctgatgttgggaaggcatttatagatactcaaagtaaaaaatcacct
gtcaaaatagacaaacccattcacaaagaagaaaatgatctgaacatacttcgaacgcct
gacatgcctaaacatgattcccccagttctctaaggcgtgatgttaaagaacgttgtgat
ttaatttcactgtcccctgctaagcgcaatatcacacctgagaagaagagccaggttgaa
actgttacatcaaagaaatttgtgatttcaccaataaaaacagaaaatgatgaggtattg
aaaagcatattacaagatatatctccaatgaagtctgattccaaagtctcagctcctaga
aagaagccctccaagctacgaacttcaagtcttttttctttacaaagtgttggtaccacc
agtactcttccagaaagaggagcgactaatggcacctcaaaaccatctctgaagaagagc
tcctcatctagttcactttctgatacaccagaactgaagtacccggctttagatattcgg
ccaaaaacattgaggcgaaaatctacggaagacttcctttcttctaacaaggacagctgt
tccccaccaaaacttacctcttgtgcaaattccccagtgaagccaagaaaaattctgagc
tctccagttagacgatctcctcgaaagatagcttctttatcaaccactttgcaggatgag
aaaaaaacaactaaagtggaaactccgcctttcttagcagaggagcttcgaatactagat
aaggaaaataaaattgatagccaggcagctcctcgcaggtcacccagaaaacatatcagt
acatctcccactgtcaaaaagacgattgggagcaattctccagctaaaggaaccccaaaa
agttttccatccaagcctcaaactacaactctaactgaatcaaatgagtttcatgacatt
gaagctgtatttcaagatgattttgatgatgtgttgtcccttatggataaaatgaatgag
gaagaattatctccattggaccttcgtgaagcccagctttgtgaggtggtatccataagt
gttgagatcccttacaaagaagtaatcatacacgtcaaaagcattggaaacaaaagtgtt
gcctcctgtagagttcgcggttgctggttgggctgcccagtttcagaaggagactgtatc
agtttggaagctgtcagggttaaagatgaatggcttctggataatactcaaggatttctt
gttttacacccagacactttaatttctggtacaacagttgttggttcactcttctgtgct
cggcgttctgtccttagtagtctatttcgtggcatggacagtgactcaccaataatggta
attggcagtattgttcatgagctgtttcaaatggtacttcaacaaagaaaacgcactgaa
cctgaagtgaggcaactatcggaacagcttatttcttcaaagaattgtgtttcaatgatg
tatgcggccaacatgaccatggctcagatgcagaaagaactttctggctttattccacgt
attgtgaactttgttgaaaaatttgttgagattcctaagccagtcaggaaagatagaaaa
ggtgcgtggcttggagctcctgcttcatcctgtgaaaatccaattcgagcatttaagggg
gaaaatagaggagcaaaagatttcaatggtaaaataataggtattcgagacattgaggaa
acactctgggagccaaaactaggcattaaaggcatggtggatgtatccgttgaagttcaa
gatacacatggaaacaagaagataatgcctctagagttaaaaaccggaaaggcttcattt
tctgccgaacatcgtggacaagttaccctttacactatgatgatgtcaaggatgggccag
cctgttgaatctggtttattattgtatcttcgggaaggacaaatgcaggaggtatcagtc
tcccggaatgaaagcaaggacctcattctacttcgaaacactatggcacactacttgaag
cctagagctcctgttataaatgaggagactggccacttctttccacctaagctacctgag
cctattagtttcagaagtgcttgtgagaagtgtccctacgttacactttgctccacattt
ttaaaggaagatgggttgtcagcaatttcttcagaccatccaatggtttcaatagcttca
tcatcaactgaacatgtatccaaactccactcagactatttcctccattggatgagtttg
cttctcatggaagatatggaacaaatgaagactgctaatttgagatatatttggaggttt
acacccaaggacagggaaaaaggccgaaaagctattaccaatctacgcctgttaaaacca
ggggtagaagtagcggggaagttccatcacacattcacccgagatgtttctggtgctgag
atttgtgatttgagggaccttggtctaagtgctggtgactacatactgattagtacaaac
aaacgtgtagctattgagcgtggtagcataattgatatagatgcttcttgtgtgagagtt
tctacaaacaggaacctatttgagcggtatgcacatgaaacatttcaccttgatgccagt
gaatccaacactgtcttggtgtttaatttaacaaatctggggtgcctgctagataacaat
gaatctgctgagcgacttcgcaaaataatcattgacagttgtttctcatttattctctcc
atgtgtatttcatcacctacattgaacctcttgttaaaaattttactgatcaaaccactt
ttttgtcaggttatgatccgggctcggttgctgcgagaaaatggacattatctacctcgt
tcgtcctttgtaatgcgtcgccattttttcaacaatgaagaaactggttatttcaaaact
cagaaaagacaagctgtatctcaaaacccaatgactgatccaagtatgatgacagagatg
ttaaagggaaatattactacagttttacccatgattgttattggtggatggatcaactgg
acattctcaggctttgttaccacaaaagtaccattcccccttactttaagatttaaacct
atgttgcaaagaggaattgagcttgtatctctagatgctgcttgggtttcctctgctagt
tggtactttctcaatgtttttggtttaagaagtatttatactttagtcttaggtgagaat
aatgctgctgatcagtctcaacatctccaggatcaaatgtcaggtgcagcaatggctatg
ccgcctgatccaaaagttgcatttaaagcagaatgggaagctcttgaaatttgtgaacac
cggtgggcattagaaaatgtagaaagtattcttttaggatatactgtatatggctacttt
gttctttcctcaggtaaaactgcgacaatggtagctttggtccaactcttggtccgtgca
gggttatctgtattggtaactagtcatacccattctgctgttgacaatctattggtgcgc
ttgaagaaggtaggattgaaattcctacgacttggaccagattcacgcattcatcctcat
gttctgtcattctctgagacttcacttacaaagcattgtaatagccctgaggacttggat
aaagtatatagtcagcagcaaattgttggtgttacatgtcttggagctggacatgcatgt
ctatccagacgtgtatttgacatttgccttgttgatgagagcactcaggtccttcaacct
tctgttctgcgcccattgtttaatgctcgtcggtttgtcctggtgggcgatccagagcag
cttccgcccgtggtgaaatgtcatcaagcgctggaacttggactttctgagagtcttttt
gctcgattggactcagaagcagcaactgtctcattgacattgaattatcggatgaaccaa
gtcatcacagatttagccaatagtctcacttatgaagggaaactaaagtgtggaaatgat
aaagttgctaatgccactcttcatctagcatcacctgccaaggttcctgaggagtcgtgg
ctggctgcttcattgtcaaccgatattgaaaagtctgctatatttatcgatacttgtgga
gcctctccaaaactaaatgtggaaaatgctcagagttctgaaagtaatggagaatcctca
tgttccaatcactttgagctgtcacttgttatgaaacttttatatacttttttaaataat
ggagtaaacactgaaggtattggtgtcatggcaccataccgggcccaagtttccttatta
acacaagcgatcaagtctgatcccaaactatctgaaattgaagtgaatacagtagatcag
tttcaaggcagagacaaagaagtggttgtgtattcgtgtacaagatcggatggtgcatcc
cagaagcaagctaaggaacgaggaattttgaatgacaaaaggcgcttgaccgtagctatc
acaagagctaaacacaagttggttttagttggccacagccaaactcttaaggtttatgca
ccctttgaaaaattgctctcatgtatacctaagaataatattatacctgttgatctctga
DBGET
integrated database retrieval system
