Thrips palmi (melon thrips): 117652017
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Entry
117652017 CDS
T08251
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04140
Autophagy - animal
tpal04142
Lysosome biogenesis
tpal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
117652017
04140 Autophagy - animal
117652017
04148 Efferocytosis
117652017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpal04131
]
117652017
Membrane trafficking [BR:
tpal04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117652017
Hops complex
117652017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Clathrin
Beta-prop_WDR36-Utp21_1st
zf-C3HC4_2
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING-like
Beta-prop_VPS8
zf-RING_5
zf_RING_Vps8_fungal
Mut7-C
Motif
Other DBs
NCBI-GeneID:
117652017
NCBI-ProteinID:
XP_034252535
UniProt:
A0A6P9A4U5
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MAFLEWRRFNFFELNRNVDSGKVRECLADRKVVASSSGNGRLVFADSEGNIHLVNRAFGI
TTLNAFALKVSLVQMMEQSPLLVAIGEDEPGVNPLIKVWNLEKLDKQDLPMCVRISRTIP
NTRPTPVSVLSVHENLNLMAVGFTDGSILLYRGDIARDRLSKQKLLRDGGMQPVTGMAFR
STAKQTFLFVATTSSIFSYNVTLKDKEEKIDLDKEGCEKYCSTSTESTHDGQFMIGREDA
VYCYTPDGRGPCYAIKGQKVMLEWYRNYLVIVTKESNSVLRSSTVSATTPDSPGSSLVSP
FSVDTHMVTVLDIQNKFIVLQTPIPEVISVLSESGSLYVLSGQLQPCLFHLQEKDLQSKL
TLLFKKNLYDVAIRIAKSHQYDADGLTDIFRQYGDHLYTNKGDHAGAIEQYIKTIGRLEP
SYVIRKFLDSQHIENLTTYLQELHKQGHATEDHTTLLLNCYTKLDKTDKLKEFIMTKDRE
VDFDVEIAIKVCRQASTEDALLLAQKHGMHDWYLKIQIEDRADFKQALDYIGKLEFSEAE
TNMKKYGCRILQSCPAEATQLLKRLCTDYRPSNKPLVDSNMLQGISSPFVDRANPADFIH
LFTECPQHLEEFLEYLLQEHKGWNPLLYNTLLEHYLNAWGTLNAAGTVETSRRLKYEQNV
MRLLKNDDARYDKDQVLILCQANNFKPGVLHLLEESHLYQQILQYHMMQRDYKEVLTTCQ
RFGQQDPNLWVQALWYCSRDSHTPPQLLEEILKVIETQKSLPPLLVLDALCTSSEVTLAN
VRSYLLNVLAAEDKLAKRERELVQKYRDESERIRQQIHNIQTKSVIFQVSRCSACNQPLE
LPSIHFLCLHSYHQHCFQSFSENERECPSCLPNNKKIRDLIKAREQNRDLHDTFHDQLDK
AEDGFSLVADYFGRGVFNKLTVVTDAPIQAPLRSAQGDAIIPSTYGAGAEARLRLAEQPS
SFTGAVSSGRPSQSMLSSSAPRAAHLSPSRIQADFAAMALGVQDTKANPNVSIPKSFETA
GASGGLRGKSPETKMISSPAKSSQSQVKKTAAPANPFDEDDDSDSNNPFASDLKEEAGKT
TNPFDEPDDYDKEKNPFGCS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttttagagtggcggaggttcaacttctttgagcttaaccgaaacgttgattca
ggaaaagttagagaatgtttggctgacaggaaagttgtggcttcaagcagtggaaatgga
cgtttagtctttgcagattcggaaggaaatattcatttggttaatagagcatttggtatc
acaacattgaatgcatttgccttgaaagttagtcttgtgcaaatgatggagcagtctccc
cttctcgtagctattggagaagatgagcctggtgtcaaccctcttattaaagtgtggaat
ttggagaagttagataagcaagatctacctatgtgtgtgaggatttcacgaactatcccc
aacactcgacctacaccagtttcagtattaagtgtccatgaaaatcttaatcttatggca
gttgggttcacggatggttcaattctcctgtatcgaggtgatattgcaagagatcgttta
tctaaacaaaaactccttcgggatggaggcatgcaaccagtaacaggaatggcgtttaga
tctacagcaaagcaaacgtttctttttgttgccacaacctcaagtatcttttcatacaat
gttacgcttaaagacaaggaggagaagattgacttggataaagagggatgtgagaagtac
tgttccacctctacagaatctactcatgatggccaatttatgataggccgtgaagacgct
gtttactgctacacaccagatggaagagggccgtgctatgcaatcaagggacaaaaagtt
atgcttgagtggtaccgtaattatctagtcattgtgactaaagaaagtaattcagtttta
agatcaagcacagtttctgctactactccggattccccaggaagttctttagtcagccct
ttcagtgtggacacccacatggtgactgtgctggatatacaaaacaagttcattgtgctt
caaacacctatcccagaagtaatttctgtgctgtctgagtctgggtcgctttatgttctt
agtggacaactacaaccatgtctatttcatctccaagagaaagatttgcagtcaaagctg
actttattgttcaagaaaaatttgtatgatgttgctataaggattgccaagagtcatcaa
tatgacgcagatggcctgacagatattttccggcagtatggtgatcatctctacaccaac
aaaggagatcatgcaggagccattgaacaatacataaaaactataggaagactagaaccg
tcttatgtcataagaaagtttttggactcccaacacattgagaacctgaccacttaccta
caagaattgcacaaacaaggccatgccactgaagatcatactacattattactcaattgc
tacaccaaacttgacaagactgacaaactgaaagaatttataatgaccaaagatcgagaa
gtggattttgatgtggaaatagcaatcaaagtttgccgtcaggcgtcaactgaagatgca
cttcttcttgctcaaaagcatggtatgcacgattggtatcttaaaattcaaattgaagac
agagctgatttcaagcaagcccttgactacattgggaagctagaatttagtgaggctgaa
acgaatatgaagaagtatggatgtagaattctccagagctgccctgcagaagccacacaa
ttgctaaagagactttgtactgactacaggccaagcaacaaacctcttgttgacagtaac
atgcttcagggaatttcgagcccatttgttgaccgtgcaaatccagccgatttcatccac
ctgtttactgaatgtcctcagcatttagaagagtttttagaatacttattgcaggaacat
aaaggttggaatcctttattatacaacactctgttagagcattatctcaatgcttggggt
acccttaatgctgctggaactgtagaaacgtcacgccgtttgaaatatgagcaaaatgtt
atgcgtctcttaaaaaatgatgatgctcgctatgacaaagatcaagtattaattctctgc
caagcgaacaacttcaaacctggtgttcttcatctactggaagagagccatctatatcaa
caaatactgcaatatcacatgatgcagcgtgattacaaggaggtgttgactacatgtcaa
agatttggtcaacaggatccaaacttatgggttcaggctctctggtattgttctcgagat
tcccatactccacctcaattattagaagaaatacttaaagtcatagaaacacaaaaatca
ctgcctcctttgcttgttctggatgctctgtgtacctcatctgaagtaaccctggctaat
gtgcgaagctatcttttgaacgttttggcagcagaagataagcttgcaaaacgagaacgg
gaactggttcagaagtaccgagacgaaagtgaacgcattcgacaacaaatacataatatt
cagacaaaatctgtcatttttcaagtttcaagatgcagtgcatgcaatcaaccactggaa
ctaccatcaattcattttctatgcctccactcgtatcaccagcattgttttcagagtttt
tctgagaatgagagagagtgtccatcatgtcttcctaataacaaaaaaattcgtgatctc
atcaaagctcgtgagcaaaatcgagatcttcatgatactttccatgaccagttagataaa
gcagaggatggcttttctcttgtggctgattattttggcagaggagttttcaacaagttg
actgttgtaacagatgcacccatccaagcgccattaagatcagctcaaggggacgcaatt
attccatccacttatggagctggagctgaagctcgtctgagactagcagagcagccttcc
tcttttactggtgctgtttcctctgggaggccatctcagtcaatgttgtcttcatcagct
ccacgagctgcacatttgagtccatctcgaatccaggcagattttgctgccatggcttta
ggtgtgcaggataccaaagccaacccaaatgtgagcattccgaaatcttttgagacagct
ggggccagtggcggactgagaggcaagagtcctgagacaaaaatgatttcctcccctgca
aagtcatcccaaagtcaagtgaaaaagactgctgccccagcaaatccatttgatgaagac
gatgatagcgacagcaataatccctttgcgagtgatctcaaagaagaagcaggaaaaaca
actaatccgtttgatgaaccagatgattatgacaaggagaaaaacccatttggttgctct
tag
DBGET
integrated database retrieval system
