Thrips palmi (melon thrips): 117652840
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Entry
117652840 CDS
T08251
Name
(RefSeq) uncharacterized protein LOC117652840 isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03013
Nucleocytoplasmic transport
tpal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117652840
03015 mRNA surveillance pathway
117652840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117652840
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117652840
mRNA cycle factors
P-body specific factors
117652840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
117652840
NCBI-ProteinID:
XP_034253886
UniProt:
A0A6P9ADL9
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MTETVKASQEDTQKDSTQQPSSPKTKSKAAKLSTEGNERPKSNDKVEKPPTKVVVRRLPP
TMTLETFLDQVSPLPPVDYMYFVKADLSLTPNSFARAYLHFVHVADLLIFTEKFDNYVFV
DSKGNEYPAIVEYAPFQRIPKQRSSRKKDPRIGTIGNDPYYLEFLEALKAEETQRKSASK
TNKQHFFETSITGAVTPKVTSTPLLEFLKARRADKLRTKEDKIAERRKREVERRKARDDA
RITVKHGKTAEADSDIAAPTSQIKLPQPSSDRTPDLAEIQTRYLRCMIGLDTDTSGLEKV
SCSACCSNNLHAPHTCQILRERMHLLLLHISNAKIILEPSSEVKVSSETTSSTDLHQPIQ
AHETLKSCCMNKLVAPGTQKPLFSSSSISSDDPLVTCPTVTQVAISKFSDAPNSSVSDSC
EMVKSTSTTSLSMIEVKSTSGGSRGSSLAQEGSGRSHKGRKVSGAQHNPPSRDTKSKFIL
NHKRGTTVPIKPDLKHPLNSNSSSKSNQSFKLSCSKRVKSNKSNMKLTELFKMLECGTLQ
VQCPSPSNCSMDQMTTLEELEKQLMSQPKNDSKVETKECQSENLNFPSERQKLQPLLSRS
KTSIQPFDNFKCGKRSPGCKEICNKRNSSSFQLNRHYCWPGEPRRLCVMCKSGASPLAID
SLPFIEAKRARCPSHFLPSRCVSHSDIRINPVKNGNFSKRLLKNSQFKGILCGHQKSFYD
MKKSLRAPFANENCNVGRECSFFHPLHYAEAFHSPVGWSLGNISELNRSLNLYSMPYPNV
PMAQANVCDKYQRQSKYDYNYRLSHNLWGCGFNAL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaccgtaaaggcaagtcaagaggacacacagaaagattcgacccagcagccg
tcgtcacccaagacaaagtcaaaagctgcaaagctgtcaactgaaggaaatgagcgtcca
aaatccaatgacaaggtcgaaaaacctccaaccaaggtggttgtacgtcgccttccacct
actatgacgctggaaacatttttagaccaagtatctcctttaccacctgtcgactacatg
tattttgtgaaagctgatttgagcttaactccaaactcatttgcaagagcttatctacat
tttgttcatgtagcagacctgctcatcttcactgaaaaatttgacaactatgtttttgtt
gacagcaaaggtaatgagtatcctgctattgtagaatatgctccattccaaagaatacca
aagcagagatcttcaaggaagaaagatcctcgtataggaacaattggtaatgacccgtac
tatctcgaatttcttgaagccttgaaagcagaggagactcagaggaagtctgcgtccaaa
acaaataagcaacatttctttgaaacatctataacaggcgcagttacaccaaaagtaaca
tcaactcccttgctggagtttttaaaagcaagacgtgcagacaaactgaggacaaaagaa
gataaaattgctgaaaggagaaagagagaggttgaaaggcgtaaagctcgcgatgatgct
cgcattacagtgaagcatgggaagactgcagaggcagatagtgacattgctgccccaacg
tcacaaataaagcttccccaaccctccagtgaccgaaccccagacttggcagagatacaa
actcgctacctgcgctgcatgattggcctggatacggatacctcaggcctagaaaaggtg
tcttgctctgcatgttgcagtaacaatttgcatgctccccacacatgtcagatcctgcgt
gaaaggatgcacctcttattgcttcatattagcaatgccaaaataattctggagcctagt
tcagaagtaaaagtttcaagtgaaaccacttctagcacagatttgcaccagcccatccaa
gcccatgaaaccctcaagtcttgctgcatgaacaaactggtagctcctggcacacagaaa
ccgctattttcttcctccagtatcagtagtgatgaccctttagtcacctgtcctacagtt
actcaagttgccattagcaaattctctgatgctcccaatagctcagtttctgactcttgt
gaaatggtgaagagcacttcaactacttcattaagtatgattgaagtgaaatctaccagt
ggaggctccagaggaagtagtctagctcaagagggaagtggtaggagccacaaaggtagg
aaagtaagtggggctcagcacaatccccccagcagggacaccaaaagcaaatttattttg
aaccacaagagaggaaccacagttcctatcaaacctgacctgaaacaccctctcaacagt
aatagctcatctaaaagtaatcaaagctttaaactatcttgttcgaagagagtaaagagt
aacaaatccaatatgaagctgactgagctgtttaaaatgctggagtgtggcactttgcaa
gtacaatgcccatctccatcaaactgctccatggaccagatgactactttggaggagctg
gaaaagcaactgatgtctcagcccaaaaatgattctaaagttgaaaccaaggaatgccag
tctgaaaacctcaattttccctctgaaagacaaaagttgcagccattgctttccagatcc
aagacatccattcaaccttttgataattttaagtgtggcaagagaagtcctggatgtaaa
gaaatttgcaataagaggaattcatcttcctttcaattgaatagacattattgttggcct
ggtgagcccaggagactttgtgttatgtgcaaatctggggcttcacctttagctatagat
tcccttccttttattgaagcaaagagagcaagatgtccatctcactttcttccgtcaaga
tgtgtgagccattctgacataaggataaatcctgtgaaaaatggcaatttttctaagcgc
ttattaaagaactctcaatttaaaggaatattatgtgggcatcaaaagagtttctatgac
atgaagaagtctttgcgggcaccttttgcaaatgagaattgtaatgttggcagagaatgt
tctttctttcatccattgcactatgcagaagcttttcattcgcctgttggatggagctta
ggaaatatctctgaacttaatcgaagtctgaacctgtattcaatgccttacccaaatgta
ccaatggcccaagctaacgtttgtgataaatatcagaggcagtcaaagtatgattataat
tacagattgtcacataatttatggggatgtgggtttaatgcactttga
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